BAC Information

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BAC

Clone NameB6Ng01-254A24
Chromosome6 (Build37)
Map Location 24,509,401 - 24,618,961
singlet/doubletdoublet
Overlap geneAsb15, EG626715, Lmod2, Wasl
Upstream geneCadps2, Rnf133, Rnf148, Tas2r118, LOC100041082, Slc13a1, LOC100041094, Iqub, Ndufa5
Downstream gene4932701A20Rik, Hyal4, Spam1, Hyal5, 6332401O19Rik, LOC384358, Gpr37
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254A24.bB6Ng01-254A24.g
ACCGA060629GA060630
length1,1441,074
definitionB6Ng01-254A24.b B6Ng01-254A24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,509,401 - 24,510,553)(24,617,888 - 24,618,961)
sequence
gaattccttcccttcctcaacctttctatgctcccagccatatttcacct
gcccgtgaatttcattatcctgtcccatgaaaagcatcatgaaagttggc
cacaaagtttaacccttggtgtacagaaaaccgggagagtcctaaattag
ttcaatgacaccataggtgtcaaatctaaaggaatgcccttgagataggg
gcaagctgagagggagagttgtgtgtgcaagaggctgccagagaacgtgc
cttagaggggatgacaaaaagaagagcatcagttccccatcagaacagtc
aaatgagactgcagagaagaggagatgctgtggacgatacagagcttggc
ccctgtaagcgcttacagcagtggcactgtgtgcaaagggtgcatccgct
tctcaatcttctccccctactaatgttgaataagagatctgatgtctggc
caggcagtggtggtccatgcccttttatcccagcactctggaaacagagg
taggcagacctctgagtttgaggccaggctggtctacagagcacgacagc
caggacaacacagagaacccctgtcttgaaaaacaacaaacaatagcaac
aaaaagaatctgatgactgaagaagaaagaggtgagattgactgtgtatg
acccaaaataacattggcttttctgggggacacgtggatggaatgagaat
ttggggtttggtacctgagatctgtggatttacattttggctgtgaagct
gtgataagggtctttacctcctcagatgtgatagttcctcaagagaagag
aagtcatattaagccagatgctttgctgggcattctggatttaaggacat
tgatcactcttttgtttaaaatttgtagaagagctagatgcaccatgtag
gtggaaaattaatgtaaatgctacaaagaagcacatactaaaagtaatta
agggaatttttaaacagccatcacgtgtgcagagctcagccctgaattcc
tgaactgtccagagaatataaggatagcatcaatagacttttatagaaaa
tggatcatgccatgtgagctatcatttgcctcttgggttcctttgcattg
cggctcatggatcataacacacaaatgcagagatatagagggga

gaattcaatttcccactaaaatcaatgaggagtgtgaatgggttgcagat
aacctatcaactctttacacagaacccagaaaacgacttgtacttaaaat
gaatggaaacaggagaaaagaagtttgtcagctttatttttgataacaaa
taaaacactccacatttaactagaaaaatatttactagaacaaatcctca
agttcccaatttacacagtgcttacataaaaatgtgcacatattttataa
tgtggacagtttacacccatgaaacttagatgctgcagtgaaagaagcgg
tattcatccctgcagcatccagaacctcttgctttgtctctataaatcag
ttctcccacagctgggcatcatcagtaccagcaattttggctccaatggc
tgactgccatggaactctgtgtgatgctattaccaattctcccatagaga
agggtgtcactatattttaatttactaacattaaccagggaagtaataca
tttcagaggacctgtacatccacaatgacaactgtaaagaaataaaatgg
gaagtgtggtcatggtagtatgggtgacacctgaaaatatcccctcactt
ccataaatacgttactataaggttttctgtcaaaatgaagcactcacctt
aaagaataatagcaaagaaagcagtggaaaataaatgtctaggagagagt
ttagtatagggaaaggaaaccacatgagaagtgaaatctaagacttactt
ttgtatttgttctatctctagacttttaatacagcagctgtactttagat
gaagataaaaaaaaacccctacctgttttagcctagtgaacttcaaaaca
tccagctgaaggagactcaaatgcttatttcctggactatatccaatctc
tcaaactgggcaaaaagaatttgagataagataaggacttgccaaagaaa
tcagtgaatgcctgtcttgttgctctgtcaggagagttatgctatcaaga
ataaaaagtcaggggaactggctaggctcttgaacaaatatgctagcctt
tctgataccagtatgaatgaataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_24509401_24510553
seq2: B6Ng01-254A24.b_48_1190

seq1  GAATTCCTTCCCTTCCTCAACCTTTCTATGCTCCCAGCCATATTTCACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCCTTCCTCAACCTTTCTATGCTCCCAGCCATATTTCACCT  50

seq1  GCCCGTGAATTTCATTATCCTGTCCCATGAAAAGCATCATGAAAGTTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGTGAATTTCATTATCCTGTCCCATGAAAAGCATCATGAAAGTTGGC  100

seq1  CACAAAGTTTAACCCTTGGTGTACAGAAAACCGGGAGAGTCCTAAATTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGTTTAACCCTTGGTGTACAGAAAACCGGGAGAGTCCTAAATTAG  150

seq1  TTCAATGACACCATAGGTGTCAAATCTAAAGGAATGCCCTTGAGATAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGACACCATAGGTGTCAAATCTAAAGGAATGCCCTTGAGATAGGG  200

seq1  GCAAGCTGAGAGGGAGAGTTGTGTGTGCAAGAGGCTGCCAGAGAACGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCTGAGAGGGAGAGTTGTGTGTGCAAGAGGCTGCCAGAGAACGTGC  250

seq1  CTTAGAGGGGATGACAAAAAGAAGAGCATCAGTTCCCCATCAGAACAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGGGGATGACAAAAAGAAGAGCATCAGTTCCCCATCAGAACAGTC  300

seq1  AAATGAGACTGCAGAGAAGAGGAGATGCTGTGGACGATACAGAGCTTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGACTGCAGAGAAGAGGAGATGCTGTGGACGATACAGAGCTTGGC  350

seq1  CCCTGTAAGCGCTTACAGCAGTGGCACTGTGTGCAAAGGGTGCATCCGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTAAGCGCTTACAGCAGTGGCACTGTGTGCAAAGGGTGCATCCGCT  400

seq1  TCTCAATCTTCTCCCCCTACTAATGTTGAATAAGAGATCTGATGTCTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATCTTCTCCCCCTACTAATGTTGAATAAGAGATCTGATGTCTGGC  450

seq1  CAGGCAGTGGTGGTCCATGCCCTTTTATCCCAGCACTCTGGAAACAGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGTGGTGGTCCATGCCCTTTTATCCCAGCACTCTGGAAACAGAGG  500

seq1  TAGGCAGACCTCTGAGTTTGAGGCCAGGCTGGTCTACAGAGCACGACAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAGACCTCTGAGTTTGAGGCCAGGCTGGTCTACAGAGCACGACAGC  550

seq1  CAGGACAACACAGAGAACCCCTGTCTTGAAAAACAACAAACAATAGCAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAACACAGAGAACCCCTGTCTTGAAAAACAACAAACAATAGCAAC  600

seq1  AAAAAGAATCTGATGACTGAAGAAGAAAGAGGTGAGATTGACTGTGTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAATCTGATGACTGAAGAAGAAAGAGGTGAGATTGACTGTGTATG  650

seq1  ACCCAAAATAACATTGGCTTTTCTGGGGGACACGTGGATGGAATGAGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAAATAACATTGGCTTTTCTGGGGGACACGTGGATGGAATGAGAAT  700

seq1  TTGGGGTTTGGTACCTGAGATCTGTGGATTTACATTTTGGCTGTGAAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGTTTGGTACCTGAGATCTGTGGATTTACATTTTGGCTGTGAAGCT  750

seq1  GTGATAAGGGTCTTTACCTCCTCAGATGTGATAGTTCCTCAAGAGAAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAAGGGTCTTTACCTCCTCAGATGTGATAGTTCCTCAAGAGAAGAG  800

seq1  AAGTCATATTAAGCCAGATGCTTTGCTGGGCATTCTGGATTTAAGGACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATATTAAGCCAGATGCTTTGCTGGGCATTCTGGATTTAAGGACAT  850

seq1  TGATCACTCTTTTGTTTAAAATTTGTAGAAGAGCTAGATGCACCATGTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCACTCTTTTGTTTAAAATTTGTAGAAGAGCTAGATGCACCATGTAG  900

seq1  GTGGAAAATTAATGTAAATGCTACAAAGAAAGCACATACTAAAAGTAAAT  950
      |||||||||||||||||||||||||||| ||||||||||||||||| |||
seq2  GTGGAAAATTAATGTAAATGCTACAAAG-AAGCACATACTAAAAGT-AAT  948

seq1  TAAGGGAATTTTTAAACAGCCATCACGTGTGCAGAAGCTCAGGGCCTGAA  1000
      |||||||||||||||||||||||||||||||||| |||||| | ||||||
seq2  TAAGGGAATTTTTAAACAGCCATCACGTGTGCAG-AGCTCA-GCCCTGAA  996

seq1  TTTCCTGAACTGTCCAGAGAAATATAAAGATAGCATCAATAGAACTTTTA  1050
       |||||||||||||||||| ||||||| |||||||||||||| |||||||
seq2  -TTCCTGAACTGTCCAGAG-AATATAAGGATAGCATCAATAG-ACTTTTA  1043

seq1  TAAGAAAATGGATCATG-CATGTGAGCTTATCAATTTTGCTCTTGGGTTT  1099
      | ||||||||||||||| ||||||||| |||| ||||  |||||||||| 
seq2  T-AGAAAATGGATCATGCCATGTGAGC-TATC-ATTTGCCTCTTGGGTTC  1090

seq1  CTTTGAAATTTGCCGCTCATGGATCATTAACACACAAA-GGAGAGATA-A  1147
      ||||| |  |||| |||||||||||| ||||||||||| | ||||||| |
seq2  CTTTGCA--TTGCGGCTCATGGATCA-TAACACACAAATGCAGAGATATA  1137

seq1  GAGGGG  1153
      ||||||
seq2  GAGGGG  1143


seq1: chr6_24617888_24618961
seq2: B6Ng01-254A24.g_69_1142 (reverse)

seq1  TTATTCATTCATCCTGGTATCAAGAAGGCTTAGCAATATTTGTTTCAAGA  50
      |||||||||||| |||||||||  ||||| |||| ||||||| |||||| 
seq2  TTATTCATTCATACTGGTATCAGAAAGGC-TAGC-ATATTTG-TTCAAG-  46

seq1  AGCCTAGCCAGTCCCCCTGAC-TTTTATTCTTGATAGCATAACTCCTCCT  99
      |||||||||||| |||||||| |||||||||||||||||||||| |||||
seq2  AGCCTAGCCAGTTCCCCTGACTTTTTATTCTTGATAGCATAACT-CTCCT  95

seq1  G-CAGAGC-ACAAGACA-GCATTCACTGTTTTCTTTGGCAAGTCCTTTTC  146
      | |||||| |||||||| |||||||||| |||||||||||||||||| ||
seq2  GACAGAGCAACAAGACAGGCATTCACTGATTTCTTTGGCAAGTCCTTATC  145

seq1  TTATCTCAAATTCTTTTTGCCCAGTTTGAGAGATTGGATATAGTCCAGGA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCAAATTCTTTTTGCCCAGTTTGAGAGATTGGATATAGTCCAGGA  195

seq1  AATAAGCATTTGAGTCTCCTTCAGCTGGATGTTTTGAAGTTCACTAGGCT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGCATTTGAGTCTCCTTCAGCTGGATGTTTTGAAGTTCACTAGGCT  245

seq1  AAAACAGGTAGGGG-TTTTTTTTATCTTCATCTAAAGTACAGCTGCTGTA  295
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAAACAGGTAGGGGTTTTTTTTTATCTTCATCTAAAGTACAGCTGCTGTA  295

seq1  TTAAAAGTCTAGAGATAGAACAAATACAAAAGTAAGTCTTAGATTTCACT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGTCTAGAGATAGAACAAATACAAAAGTAAGTCTTAGATTTCACT  345

seq1  TCTCATGTGGTTTCCTTTCCCTATACTAAACTCTCTCCTAGACATTTATT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGTGGTTTCCTTTCCCTATACTAAACTCTCTCCTAGACATTTATT  395

seq1  TTCCACTGCTTTCTTTGCTATTATTCTTTAAGGTGAGTGCTTCATTTTGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTGCTTTCTTTGCTATTATTCTTTAAGGTGAGTGCTTCATTTTGA  445

seq1  CAGAAAACCTTATAGTAACGTATTTATGGAAGTGAGGGGATATTTTCAGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAACCTTATAGTAACGTATTTATGGAAGTGAGGGGATATTTTCAGG  495

seq1  TGTCACCCATACTACCATGACCACACTTCCCATTTTATTTCTTTACAGTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACCCATACTACCATGACCACACTTCCCATTTTATTTCTTTACAGTT  545

seq1  GTCATTGTGGATGTACAGGTCCTCTGAAATGTATTACTTCCCTGGTTAAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGTGGATGTACAGGTCCTCTGAAATGTATTACTTCCCTGGTTAAT  595

seq1  GTTAGTAAATTAAAATATAGTGACACCCTTCTCTATGGGAGAATTGGTAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTAAATTAAAATATAGTGACACCCTTCTCTATGGGAGAATTGGTAA  645

seq1  TAGCATCACACAGAGTTCCATGGCAGTCAGCCATTGGAGCCAAAATTGCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATCACACAGAGTTCCATGGCAGTCAGCCATTGGAGCCAAAATTGCT  695

seq1  GGTACTGATGATGCCCAGCTGTGGGAGAACTGATTTATAGAGACAAAGCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTGATGATGCCCAGCTGTGGGAGAACTGATTTATAGAGACAAAGCA  745

seq1  AGAGGTTCTGGATGCTGCAGGGATGAATACCGCTTCTTTCACTGCAGCAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTTCTGGATGCTGCAGGGATGAATACCGCTTCTTTCACTGCAGCAT  795

seq1  CTAAGTTTCATGGGTGTAAACTGTCCACATTATAAAATATGTGCACATTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTTTCATGGGTGTAAACTGTCCACATTATAAAATATGTGCACATTT  845

seq1  TTATGTAAGCACTGTGTAAATTGGGAACTTGAGGATTTGTTCTAGTAAAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAAGCACTGTGTAAATTGGGAACTTGAGGATTTGTTCTAGTAAAT  895

seq1  ATTTTTCTAGTTAAATGTGGAGTGTTTTATTTGTTATCAAAAATAAAGCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTAGTTAAATGTGGAGTGTTTTATTTGTTATCAAAAATAAAGCT  945

seq1  GACAAACTTCTTTTCTCCTGTTTCCATTCATTTTAAGTACAAGTCGTTTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACTTCTTTTCTCCTGTTTCCATTCATTTTAAGTACAAGTCGTTTT  995

seq1  CTGGGTTCTGTGTAAAGAGTTGATAGGTTATCTGCAACCCATTCACACTC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTCTGTGTAAAGAGTTGATAGGTTATCTGCAACCCATTCACACTC  1045

seq1  CTCATTGATTTTAGTGGGAAATTGAATTC  1074
      |||||||||||||||||||||||||||||
seq2  CTCATTGATTTTAGTGGGAAATTGAATTC  1074


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