BAC Information

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BAC

Clone NameB6Ng01-254D14
Chromosome15 (Build37)6 (Build37)
Map Location 91,063,437 - 91,063,474123,396,764 - 123,397,742
singlet/doubletsingletsinglet
Overlap geneLOC545126
Upstream geneCpne8, EG627342, LOC100042462, LOC100042471, EG667682, Tcea1-ps1, Spn-ps, Kif21a, EG635871, Abcd2
Downstream geneSlc2a13, Lrrk2, Muc19, Smgc, LOC100042529, Cntn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254D14.bB6Ng01-254D14.g
ACCGA060750GA060751
length852974
definitionB6Ng01-254D14.b B6Ng01-254D14.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(91,063,437 - 91,063,474)(123,396,764 - 123,397,742)
sequence
gaattccagccttcccaccctattctctcccctattctgccactggatgg
tcacatagcattttttgatgaatcaaggaataattgaggaacaatgcttt
tatgatattgagacagaagagtctcagaataagggaaaacagatatgcag
acacagaaaccagaatttgaataatatttacacagggcacaataacattg
tgactacatttatttcagacaagtgacaggatgcaagatcagttttccta
tattcactgaggtttgatttaatttctaatatgtgatcattttggaggac
attcagtgaagtgctgagatccaatgttctttagtgtttggtgagatgct
ctgtagatttctgctaggcccattttattctgatctaatttaacttctat
gtttctttgtttcttttatttttttcctagataactgatctatttttgag
agtagtgcattgaattattcacttgtattaggattaatctgtttgtttgg
ttttttttaattgttatttcctgaaattggctacacttttgctttgtgga
aatgttctaaacttgtaatagactcatcatggactcttcttttaaggagt
atgaagagaccctccttatcagttctgagtagttttggtttgaagtctat
cttgtcagatactagatcaaacattcctgcttgattcttaattccatttt
cttcagaaatcattttctaatcttttactctaagatggtatctatctttg
gtagtaagacatgttgtttttggtttcatgaaggggataaattccatttt
caagccaatctactagtctctctctctctctctctctctctctctctctc
tc
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctcagcaggctcccctcaaaattagaaactaatttctggaaata
ccaggtcatatttttccaaacacttttagtaggaatgaatacagaattct
aagagactcgaatgctaaagatatacgtagagacaatcatatcgtctctc
tcacactatcaaataaaacataaaataaaatttaagagaagataagcatt
gaataatatttgttgttacattatgtgatgtatctaacagaggccaaagg
ggaaaaaatttccaaggatgaagccagagaacagccaaggaagagaaaac
attaatctagatattggagaagcctagaaaatcctacatgggatgaaaaa
actaaaatattttttatcattgttgaaccagagaatttcccaaaaaagta
taaactacaatctgattatgtacaatgtcaatgtaagttaaaataaaaag
agatactatttcataatttcaatatgataaaatttaagactatcaaagat
tacacagcttgtacagattgcattattttagataggaactatgcttgagg
cactcaattatcaaatataatttagaaaataatttagacggtcctgacca
aaaacattttgctaaaataatgcttataattgaattctaagatattttat
gaatttataccagtaaattatgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_91063437_91063474
seq2: B6Ng01-254D14.b_861_898 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACT  38
      ||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACT  38

seq1: chr6_123396764_123397742
seq2: B6Ng01-254D14.g_68_1041 (reverse)

seq1  TACATTAATTTACTGGTATATATTCATACAAATTATC-TAGAATTTCAAT  49
      |||| ||||||||||||||| ||||||  ||| |||| ||||| ||||| 
seq2  TACA-TAATTTACTGGTATAAATTCAT--AAAATATCTTAGAA-TTCAA-  45

seq1  TTATAAGCATTATTTTAGCAAAAATGTTTTTTGGTCAGGACCGTCTAAAT  99
      ||||||||||||||||||| |||||| |||||||||||||||||||||||
seq2  TTATAAGCATTATTTTAGC-AAAATG-TTTTTGGTCAGGACCGTCTAAAT  93

seq1  TATTTTTCTAAATTATATTTGATAATTG-GTGCCTCAAGCATAGTTCCTA  148
      || ||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TA-TTTTCTAAATTATATTTGATAATTGAGTGCCTCAAGCATAGTTCCTA  142

seq1  TCTAAAAT-ATGCAATCTGTACAAGCTGTGTAATCTTTGATAGTCTTAAA  197
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAATAATGCAATCTGTACAAGCTGTGTAATCTTTGATAGTCTTAAA  192

seq1  TTTTATCATATTGAAATTATGAAATAGTATCTCTTTTTATTTTAACTTAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCATATTGAAATTATGAAATAGTATCTCTTTTTATTTTAACTTAC  242

seq1  ATTGACATTGTACATAATCAGATTGTAGTTTATACTTTTTTGGGAAATTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACATTGTACATAATCAGATTGTAGTTTATACTTTTTTGGGAAATTC  292

seq1  TCTGGTTCAACAATGATAAAAAATATTTTAGTTTTTTCATCCCATGTAGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTCAACAATGATAAAAAATATTTTAGTTTTTTCATCCCATGTAGG  342

seq1  ATTTTCTAGGCTTCTCCAATATCTAGATTAATGTTTTCTCTTCCTTGGCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTAGGCTTCTCCAATATCTAGATTAATGTTTTCTCTTCCTTGGCT  392

seq1  GTTCTCTGGCTTCATCCTTGGAAATTTTTTCCCCTTTGGCCTCTGTTAGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTGGCTTCATCCTTGGAAATTTTTTCCCCTTTGGCCTCTGTTAGA  442

seq1  TACATCACATAATGTAACAACAAATATTATTCAATGCTTATCTTCTCTTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCACATAATGTAACAACAAATATTATTCAATGCTTATCTTCTCTTA  492

seq1  AATTTTATTTTATGTTTTATTTGATAGTGTGAGAGAGACGATATGATTGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATTTTATGTTTTATTTGATAGTGTGAGAGAGACGATATGATTGT  542

seq1  CTCTACGTATATCTTTAGCATTCGAGTCTCTTAGAATTCTGTATTCATTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACGTATATCTTTAGCATTCGAGTCTCTTAGAATTCTGTATTCATTC  592

seq1  CTACTAAAAGTGTTTGGAAAAATATGACCTGGTATTTCCAGAAATTAGTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAAAAGTGTTTGGAAAAATATGACCTGGTATTTCCAGAAATTAGTT  642

seq1  TCTAATTTTGAGGGGAGCCTGCTGAGGAGAAAGTGGGGAAAAGCCTTGAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTTTGAGGGGAGCCTGCTGAGGAGAAAGTGGGGAAAAGCCTTGAA  692

seq1  GATATGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGC  742

seq1  TGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCT  792

seq1  GCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGG  842

seq1  GAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACAT  892

seq1  ATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTA  942

seq1  AAAAATGGGGCTCAGAACTGAACAAAGAATTC  979
      ||||||||||||||||||||||||||||||||
seq2  AAAAATGGGGCTCAGAACTGAACAAAGAATTC  974