BAC Information

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BAC

Clone NameB6Ng01-254N05
Chromosome6 (Build37)
Map Location 34,738,214 - 34,893,031
singlet/doubletdoublet
Overlap geneAgbl3, Tmem140, 3110062M04Rik, 9530020G05Rik, Stra8
Upstream geneExoc4, Lrguk, Slc35b4, Akr1b3, Akr1b8, LOC664942, 2310005E10Rik, Akr1b7, Bpgm, LOC100039184, Cald1
Downstream gene2010107G12Rik, Cnot4, Nup205, 1810058I24Rik, Slc13a4, BC064033, 1700065J11Rik, Mtpn, LOC100039312, LOC100039327
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254N05.bB6Ng01-254N05.g
ACCGA061192GA061193
length1021,076
definitionB6Ng01-254N05.b B6Ng01-254N05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,892,930 - 34,893,031)(34,738,214 - 34,739,284)
sequence
tatagaagacaaaatgaaaggttggaagtacctggcagtgccttccttcc
caactctgtctgtcctttcccctccctccccctccctccctccctccctc
cc
gaattctctggtgccatatatcaggtttcttacatgttaagtagaatttg
agctttatgagcccagcttccatcctgattgaaggtgtgtgtgttccatg
gtacaagtgcggatgtagtctttcccagcattggtttcccaagatctcca
gtcatgagggaaacttcaaagctactagtgacaacttgtgcatcttgaga
gctttatttgggggctgtgccatgttgttgttcaggctgtgtcctgcaat
atgtgaaggctttacaggttattaaactgcaacatccacacaggaagagt
tgaagtttatgcaggaagaattgaaatttgttcccaggtgtctttgacaa
ttttccctacttgctactatttcagaaagtctgtattccatggctttgta
cattcctttggaaatgctctttaaaataagtttaaatacttgacagggcg
tacaagactaaacagagctctgcttgtaggtcacttttatttaaaggcag
aggaagggtacaacaaaaacgaagagcctctggaaaatgccgcagcctag
aagacatccaggtgcaagctccccagagtcttaattcacacttgtgtata
tgtgcatgtgcacacgcaacacacacacacacacacacacacacttgact
tcttttggttaaaacattaattgcttgcagtgaatctctcttcctcagaa
actaagtctttctgcttctgctatcatgtcgttaaaacagcttggttaac
tgtactgccaaatgaagggcatatgtttataaagtttttagggttaccag
agcagtctaaaacctttaaacagtttcatctactaatcttattatccttt
tattagccaagagcaaagctaggacatcccagtatacccatgtagataaa
atagaacttttccctggcccagttgtatatacaattgtctgttgtgaaag
tctttccatattagcctcgtgtacaccaattttttattatatacattaag
cttccattaaggtaatgacccataatttagttggtacctttcttaatggg
tttcagagcaagcttaaaaatatcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_34892930_34893031
seq2: B6Ng01-254N05.b_57_158 (reverse)

seq1  GGGAGGGAGGGAGGGAGGGAGGGGGAGGGAGGGGAAAGGACAGACAGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGAGGGAGGGAGGGAGGGGGAGGGAGGGGAAAGGACAGACAGAGT  50

seq1  TGGGAAGGAAGGCACTGCCAGGTACTTCCAACCTTTCATTTTGTCTTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGGAAGGCACTGCCAGGTACTTCCAACCTTTCATTTTGTCTTCTA  100

seq1  TA  102
      ||
seq2  TA  102

seq1: chr6_34738214_34739284
seq2: B6Ng01-254N05.g_71_1146

seq1  GAATTCTCTGGTGCCATATATCAGGTTTCTTACATGTTAAGTAGAATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGTGCCATATATCAGGTTTCTTACATGTTAAGTAGAATTTG  50

seq1  AGCTTTATGAGCCCAGCTTCCATCCTGATTGAAGGTGTGTGTGTTCCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTATGAGCCCAGCTTCCATCCTGATTGAAGGTGTGTGTGTTCCATG  100

seq1  GTACAAGTGCGGATGTAGTCTTTCCCAGCATTGGTTTCCCAAGATCTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGTGCGGATGTAGTCTTTCCCAGCATTGGTTTCCCAAGATCTCCA  150

seq1  GTCATGAGGGAAACTTCAAAGCTACTAGTGACAACTTGTGCATCTTGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGAGGGAAACTTCAAAGCTACTAGTGACAACTTGTGCATCTTGAGA  200

seq1  GCTTTATTTGGGGGCTGTGCCATGTTGTTGTTCAGGCTGTGTCCTGCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATTTGGGGGCTGTGCCATGTTGTTGTTCAGGCTGTGTCCTGCAAT  250

seq1  ATGTGAAGGCTTTACAGGTTATTAAACTGCAACATCCACACAGGAAGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAGGCTTTACAGGTTATTAAACTGCAACATCCACACAGGAAGAGT  300

seq1  TGAAGTTTATGCAGGAAGAATTGAAATTTGTTCCCAGGTGTCTTTGACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTTATGCAGGAAGAATTGAAATTTGTTCCCAGGTGTCTTTGACAA  350

seq1  TTTTCCCTACTTGCTACTATTTCAGAAAGTCTGTATTCCATGGCTTTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCTACTTGCTACTATTTCAGAAAGTCTGTATTCCATGGCTTTGTA  400

seq1  CATTCCTTTGGAAATGCTCTTTAAAATAAGTTTAAATACTTGACAGGGCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTTTGGAAATGCTCTTTAAAATAAGTTTAAATACTTGACAGGGCG  450

seq1  TACAAGACTAAACAGAGCTCTGCTTGTAGGTCACTTTTATTTAAAGGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGACTAAACAGAGCTCTGCTTGTAGGTCACTTTTATTTAAAGGCAG  500

seq1  AGGAAGGGTACAACAAAAACGAAGAGCCTCTGGAAAATGCCGCAGCCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGGTACAACAAAAACGAAGAGCCTCTGGAAAATGCCGCAGCCTAG  550

seq1  AAGACATCCAGGTGCAAGCTCCCCAGAGTCTTAATTCACACTTGTGTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATCCAGGTGCAAGCTCCCCAGAGTCTTAATTCACACTTGTGTATA  600

seq1  TGTGCATGTGCACACGCAACACACACACACACACACACACACACTTGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATGTGCACACGCAACACACACACACACACACACACACACTTGACT  650

seq1  TCTTTTGGTTAAAACATTAATTGCTTGCAGTGAATCTCTCTTCCTCAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGGTTAAAACATTAATTGCTTGCAGTGAATCTCTCTTCCTCAGAA  700

seq1  ACTAAGTCTTTCTGCTTCTGCTATCATGTCGTTAAAACAGCTTGGTTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGTCTTTCTGCTTCTGCTATCATGTCGTTAAAACAGCTTGGTTAAC  750

seq1  TGTACTGCCAAATGAAGGGCATATGTTTATAAAGTTTTTAGGGTTACCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGCCAAATGAAGGGCATATGTTTATAAAGTTTTTAGGGTTACCAG  800

seq1  AGCAGTCTAAAACC-TTAAACAG-TTCATCTACTAATCTTATTATCCTTT  848
      |||||||||||||| |||||||| ||||||||||||||||||||||||||
seq2  AGCAGTCTAAAACCTTTAAACAGTTTCATCTACTAATCTTATTATCCTTT  850

seq1  TATTAGCCAAGAGCAAAGCTA-GACAT-CCAGTATA-CCATGTAGATAAA  895
      ||||||||||||||||||||| ||||| |||||||| |||||||||| ||
seq2  TATTAGCCAAGAGCAAAGCTAGGACATCCCAGTATACCCATGTAGAT-AA  899

seq1  AATAGAACTTTTCCCTGGCCCAGTTGTATATACAATTGTCTGTTGTGAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAACTTTTCCCTGGCCCAGTTGTATATACAATTGTCTGTTGTGAAA  949

seq1  GTCTTTCCATATTAG-CTCGTGTACACC-ATTTTTTATTATTATTACATT  993
      ||||||||||||||| |||||||||||| ||||||||||||   ||||||
seq2  GTCTTTCCATATTAGCCTCGTGTACACCAATTTTTTATTAT--ATACATT  997

seq1  -AGCTTCCATTAAGTAAATGAACCATAATTTAGTTGGTACC-TTCTTAAT  1041
       |||||||||||||  ||||| ||||||||||||||||||| ||||||||
seq2  AAGCTTCCATTAAGGTAATGACCCATAATTTAGTTGGTACCTTTCTTAAT  1047

seq1  GGGTTTCAGAGCAGAGCTTAAAAATATCAC  1071
      ||||||||||||| ||||||||||||||||
seq2  GGGTTTCAGAGCA-AGCTTAAAAATATCAC  1076