BAC Information

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BAC

Clone NameB6Ng01-255D08
Chromosome6 (Build37)
Map Location 132,067,075 - 132,068,259
singlet/doubletsinglet
Overlap geneEG114600
Upstream geneLOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802
Downstream genePrb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255D08.bB6Ng01-255D08.g
ACCGA061473GA061474
length1,2301,166
definitionB6Ng01-255D08.b B6Ng01-255D08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaagctggtatacagaaaatcaagtaatactattttaaaaag
ggggaacaaaaaattctcaactgaggagtaccaaatggctgagaagatct
ttaccaacatatacaaggaattcaaaacgctggaatccagaaaatcaaat
aaccctattaaaacagggagggggaggtacaaaaaattcttaactgagaa
atatcaaatggtttaaaagcacctgaaaaaatgttcaaccttattagtca
tcagagaaattgaagtcaaaacaaccctgagattccatctcataccagta
agaatgcctaagatcaaaaattcaggtgacagcagatgctggcaaggatg
tgaagaaagaggaccactcctccattgctggtgggattgcaagcttgtac
aatcactctgcaaatcagtctggcttttcctcagaaaattggacatatta
ctaccagaggatccagaaatacctctcctgtgcatatactcagaagatgt
tccaactggtaataataacacatgctctaccatgttcttagctgccttat
ttataatagccagaagcaggaaagaacccagatgtctctcaacagaggaa
tgaatacagaaaatgtggtaaatttacacaatgtagtactactcagctat
taaaaacaatggatttatgaaatttttaggcaaattgatggaattggatg
atatcatcctgagtgaggtaatgcaatcacaaaactcaagtaatatacat
tcactgataagtgagtattagcccagaaatttagaatatccaagatacaa
tttgcaaaacacatgaaactcaagaaaaaggaaggtctaagtgtggatac
ttagtccctccttagaatggggaacaaaatacccatgggaaggagttgca
gagacaagtttggagctgagacagaaggaaggactatccagagactgctc
cacctggatatccatactataatcagccgccaaatgcagacactatttca
tatgcagcagattttgctgacatgacccttattttgctgtttctggcaaa
tacagaagtgaatgctcacagtcatctatgatgacacagggcccagggaa
gagctagagaagtacccaggatctggagggttgtaacctaaggagtatag
caactgaacttacagtctcctggatcagttctctagctacaatgtatgtt
agaggaatgtggacacttagtgtccgggcc
attctttctttttcattttttattagaacttttcttcattaacatttcac
atgttatcctgaaaaacgactataatctccccaatgtcctacttcccaac
ccacacacactcccatttcttgatcctggtgttcccctctactggggcat
acaaagtttcaatgccaaaaggcttgtcttctgaatgatggccaagtagg
caatctgagaagatatgaagcccctggcaaatactaaagtgcatgcacac
agtcacctattggtgggaacacagggacccagtggaggagctagagaaag
taccaaggagctgaaggggtctgcaacccaataggtggaacaagaatatg
aactaactagcaatcccagagaccctgtctctagaactgaattcttgata
gcctcagccctactgcatcctgctaggctaaagtcccaaagaagagtcag
ggatgcatggcatgctcctgtcacaagtgtgttctacagtaaggaagtga
aagatgcctttgttctaccctccttataaagactgtggccttccttcctc
cagcacaaccttgggagcaatcttccaagatgctggttgtcctgctcaca
gcagctttgctggtcctgagctcagctcagagacaagatgaaggtatgaa
gtaggggagagagtggtacagtgatatttgactggtgtaacacacttcag
gactgggagaaatgaaaggagatggaaaaggaacagaggcaaagaattat
gagaacaaatagaagaacatttgttataattttacttctagagcttaaac
tatacttatggtatgaattacaaatattcttgcaacaaaataacctgagt
aaattcaaaaaaagacttttttgtagtagaagatgcaagaagtatgttgt
agtttacagagggaacttattttttatggtgttatgaaaaaccaatagtc
gattgtgcttgccttgtgtgtagaggacagagaaagaggaagtattaaaa
catattaaggaatggtttagagaaacaatgtaacaattttaaactgtaca
acatgactataaatatcagggttatttcttctaaatacctttatatcatt
tttgattgtcataaaaatggaagtctctgagtgtctagccaatgtgtctc
tccatattttccaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132067075_132068259
seq2: B6Ng01-255D08.g_68_1233 (reverse)

seq1  CATTTGAAAATATGGAGACACA---TGGCTAGACACACTCAGAGACTTCC  47
      |||| ||||||||||||| |||   |||||||  ||||||||||||||||
seq2  CATTGGAAAATATGGAGAGACACATTGGCTAG--ACACTCAGAGACTTCC  48

seq1  ATATTTTTATGACCATCCATAAAATGAATATTAAAGTAATATTTAGAAGA  97
        ||||||||||| |||   |||||| |||| || |   |||||||||||
seq2  --ATTTTTATGACAATC--AAAAATG-ATATAAAGG---TATTTAGAAGA  90

seq1  AATTAACCCCTGATATTTATAGTTCATGTTGTACAGTTTAAAATTTGTTA  147
      |||  | ||||||||||||||| |||||||||||||||||||| ||||| 
seq2  AAT--AACCCTGATATTTATAG-TCATGTTGTACAGTTTAAAA-TTGTT-  135

seq1  ACATTTGTTTTCTCTTAAAACCATTCC-TAATATGTTTTTAATACTTTCC  196
      |||||   |||||||  |||||||||| ||||||| ||||||||| ||||
seq2  ACATT--GTTTCTCT--AAACCATTCCTTAATATG-TTTTAATAC-TTCC  179

seq1  TCTTTCTCTGTCCTCTACACACAAGGCAAGCACAATCGACTATTGGTTTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCTGTCCTCTACACACAAGGCAAGCACAATCGACTATTGGTTTT  229

seq1  TCATAACACCATAAAAAATAAGTTTCCCTCTGTAAACTACAACATACTTT  296
      |||||||||||||||||||||| |||||||||||||||||||||||| ||
seq2  TCATAACACCATAAAAAATAAG-TTCCCTCTGTAAACTACAACATAC-TT  277

seq1  CTTGCATCTTCTACTACAAAAAAGTCTTTTTTTGAATTTACTCAGGTTAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATCTTCTACTACAAAAAAGTCTTTTTTTGAATTTACTCAGGTTAT  327

seq1  TTTGTTGCAAGAATATTTGTAATTCATACCATAAGTATAGTTTAAGCTCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGCAAGAATATTTGTAATTCATACCATAAGTATAGTTTAAGCTCT  377

seq1  AGAAGTAAAATTATAACAAATGTTCTTCTATTTGTTCTCATAATTCTTTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAAAATTATAACAAATGTTCTTCTATTTGTTCTCATAATTCTTTG  427

seq1  CCTCTGTTCCTTTTCCATCTCCTTTCATTTCTCCCAGTCCTGAAGTGTGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTTCCTTTTCCATCTCCTTTCATTTCTCCCAGTCCTGAAGTGTGT  477

seq1  TACACCAGTCAAATATCACTGTACCACTCTCTCCCCTACTTCATACCTTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCAGTCAAATATCACTGTACCACTCTCTCCCCTACTTCATACCTTC  527

seq1  ATCTTGTCTCTGAGCTGAGCTCAGGACCAGCAAAGCTGCTGTGAGCAGGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTCTCTGAGCTGAGCTCAGGACCAGCAAAGCTGCTGTGAGCAGGA  577

seq1  CAACCAGCATCTTGGAAGATTGCTCCCAAGGTTGTGCTGGAGGAAGGAAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAGCATCTTGGAAGATTGCTCCCAAGGTTGTGCTGGAGGAAGGAAG  627

seq1  GCCACAGTCTTTATAAGGAGGGTAGAACAAAGGCATCTTTCACTTCCTTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAGTCTTTATAAGGAGGGTAGAACAAAGGCATCTTTCACTTCCTTA  677

seq1  CTGTAGAACACACTTGTGACAGGAGCATGCCATGCATCCCTGACTCTTCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGAACACACTTGTGACAGGAGCATGCCATGCATCCCTGACTCTTCT  727

seq1  TTGGGACTTTAGCCTAGCAGGATGCAGTAGGGCTGAGGCTATCAAGAATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGACTTTAGCCTAGCAGGATGCAGTAGGGCTGAGGCTATCAAGAATT  777

seq1  CAGTTCTAGAGACAGGGTCTCTGGGATTGCTAGTTAGTTCATATTCTTGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTAGAGACAGGGTCTCTGGGATTGCTAGTTAGTTCATATTCTTGT  827

seq1  TCCACCTATTGGGTTGCAGACCCCTTCAGCTCCTTGGTACTTTCTCTAGC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTATTGGGTTGCAGACCCCTTCAGCTCCTTGGTACTTTCTCTAGC  877

seq1  TCCTCCACTGGGTCCCTGTGTTCCCACCAATAGGTGACTGTGTGCATGCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCACTGGGTCCCTGTGTTCCCACCAATAGGTGACTGTGTGCATGCA  927

seq1  CTTTAGTATTTGCCAGGGGCTTCATATCTTCTCAGATTGCCTACTTGGCC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTATTTGCCAGGGGCTTCATATCTTCTCAGATTGCCTACTTGGCC  977

seq1  ATCATTCAGAAGACAAGCCTTTTGGCATTGAAACTTTGTATGCCCCAGTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCAGAAGACAAGCCTTTTGGCATTGAAACTTTGTATGCCCCAGTA  1027

seq1  GAGGGGAACACCAGGATCAAGAAATGGGAGTGTGTGTGGGTTGGGAAGTA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAACACCAGGATCAAGAAATGGGAGTGTGTGTGGGTTGGGAAGTA  1077

seq1  GGACATTGGGGAGATTATAGTCGTTTTTCAGGATAACATGTGAAATGTTA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTGGGGAGATTATAGTCGTTTTTCAGGATAACATGTGAAATGTTA  1127

seq1  ATGAAGAAAAGTTCTAATAAAAAATGAAAAAGAAAGAAT  1185
      |||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAAAAGTTCTAATAAAAAATGAAAAAGAAAGAAT  1166