BAC Information

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BAC

Clone NameB6Ng01-255H21
Chromosome6 (Build37)
Map Location 132,327,840 - 132,328,641
singlet/doubletsinglet
Overlap genenone
Upstream geneCsda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802, EG114600, Prb1, LOC631126, LOC100043878, Prpmp5, EG667929
Downstream geneEG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618, 5530400C23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255H21.bB6Ng01-255H21.g
ACCGA061686GA061687
length1,222996
definitionB6Ng01-255H21.b B6Ng01-255H21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcacctgcttcagagctactaagagctggctccccgagcccat
ctagcgatgagcacaggctccttttcctagagacctccgctaattgatct
ttcttctttttcttttttcctctttttcttctaatttctctccaggtatt
cttacctgacctaaactttttctcgggttcaagacccttggaaaggcctg
tatacttaccgtttctccttgctcctactttttttccccgctttactttt
gatagactgccctgaattttttctagaattttcagccctatcttaatcac
ttgataacatgtgaaaaggaacaaaagggctcctaacaccagaaaaaatt
caaggccaaacattttccactttacttctgatagactgtcttgaatttcg
ttagaaagttcaagattagacttatcttgtaaagctatacttacgggtta
ccgccgttccccagctgaaaagttctgaatttatacagttgaatccttct
taacagtctgctttacgggaacctttatcaccgtcgttccccagctgatg
agttctgaatttggcagttgaatccttctcaacagtctgtgttacgggaa
cctttataaacgtgatctgcagttctggttccggaatgagggatcctcct
tgcgccagtcccgagttttttttctcttcccgggtttcggcaccaattgt
tattagacgcgttctcacgaccggccaggaagaacaccacagaccagaat
cttctgcggcaaagctttattcttacatcttcaggaacagagtgcaagaa
gcaagagagcaagaagcaagagagagagaaaagcaagagagagagaaaag
caagagagcgaaaaagcaagagagagagcgagagacaagagagagagaga
acgaaaccccgtccctcttaaggagcattctccttcgcctcggacgtgtc
actccctgattggctgcagcccatcggccgagttgacgtcacggggaagc
agagcacaagtagtcataagatacccttggcacatgcgcagattattttg
tttacacttagaaacacagctgtcagcgccatcttgtacggcgatggtgg
gcgcggctccacataagaactgcatccctatctcattgccaatagattgg
caattggcccactgagtctggaaaatatccaaaaattctctctgggcgag
tacactaattgaccatagattg
gaattccttctcatattattttttatgcagaaagttctcttctggcatac
ataattcataagatattagtagaatattattagaaagaaagttgttgcat
agttttggtggaaatcctagagttatttatattccacctaatggtaaagg
taatcatctagatatttgcttttggctctgaaattcaatggaagtgtttg
ttccattttgttttgttttgtttgtatgttttgttttgcttatcttttgg
agacatgaagacaatttgtatggaagaaaattagaggacatctgactttt
ttgtttttttttttaattatctttaatcattttttacagtccagttctca
tgccgctttgtctgtcctccaagagatcctcatcacatttctccaccaac
ccccccttctccaagagaatgtctccatccacccaccatgccaggacttc
ccactccatgggtcctcaaggctctccagggttatgtgtgtcttttctta
ctgtgaccagaacagacagaccactggtgcatatgtgtccaggaattcca
taattcaattacaagagtccctggtttctgttcattcgttaggactaagt
atctgtgtctgtctcagtcagctgcttgttgggcctttcagagggtagac
atgctatgctcctgtctgtaagtatgccatggcatctgagtcattctgat
tggtgtaaggtggaatctcagggtacttttaacttgtgtttccctgatta
ctgaaaactttgaacatttttaagtgcctctcagttatttgagattcctc
tgttatgaattatctgtttagttccttcaacataaaaccatacacactgt
atctaatggaagaggaagtgagaaagaatcttgaactcattggcagggga
agaggttgtggtagagatttattaaacaaaattacaagggctcagtttct
aagatcaagaactgataaatggcaacttatgaaactgaaaaacttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132327840_132328641
seq2: B6Ng01-255H21.g_64_865

seq1  GAATTCCTTCTCATATTATTTTTTATGCAGAAAGTTCTCTTCTGGCATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTCATATTATTTTTTATGCAGAAAGTTCTCTTCTGGCATAC  50

seq1  ATAATTCATAAGATATTAGTAGAATATTATTAGAAAGAAAGTTGTTGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCATAAGATATTAGTAGAATATTATTAGAAAGAAAGTTGTTGCAT  100

seq1  AGTTTTGGTGGAAATCCTAGAGTTATTTATATTCCACCTAATGGTAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGGTGGAAATCCTAGAGTTATTTATATTCCACCTAATGGTAAAGG  150

seq1  TAATCATCTAGATATTTGCTTTTGGCTCTGAAATTCAATGGAAGTGTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCATCTAGATATTTGCTTTTGGCTCTGAAATTCAATGGAAGTGTTTG  200

seq1  TTCCATTTTGTTTTGTTTTGTTTGTATGTTTTGTTTTGCTTATCTTTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTTGTTTTGTTTTGTTTGTATGTTTTGTTTTGCTTATCTTTTGG  250

seq1  AGACATGAAGACAATTTGTATGGAAGAAAATTAGAGGACATCTGACTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGAAGACAATTTGTATGGAAGAAAATTAGAGGACATCTGACTTTT  300

seq1  TTGTTTTTTTTTTTAATTATCTTTAATCATTTTTTACAGTCCAGTTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTTTTTTTAATTATCTTTAATCATTTTTTACAGTCCAGTTCTCA  350

seq1  TGCCGCTTTGTCTGTCCTCCAAGAGATCCTCATCACATTTCTCCACCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGCTTTGTCTGTCCTCCAAGAGATCCTCATCACATTTCTCCACCAAC  400

seq1  CCCCCCTTCTCCAAGAGAATGTCTCCATCCACCCACCATGCCAGGACTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCTTCTCCAAGAGAATGTCTCCATCCACCCACCATGCCAGGACTTC  450

seq1  CCACTCCATGGGTCCTCAAGGCTCTCCAGGGTTATGTGTGTCTTTTCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCATGGGTCCTCAAGGCTCTCCAGGGTTATGTGTGTCTTTTCTTA  500

seq1  CTGTGACCAGAACAGACAGACCACTGGTGCATATGTGTCCAGGAATTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACCAGAACAGACAGACCACTGGTGCATATGTGTCCAGGAATTCCA  550

seq1  TAATTCAATTACAAGAGTCCCTGGTTTCTGTTCATTCGTTAGGACTAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCAATTACAAGAGTCCCTGGTTTCTGTTCATTCGTTAGGACTAAGT  600

seq1  ATCTGTGTCTGTCTCAGTCAGCTGCTTGTTGGGCCTTTCAGAGGGTAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGTCTGTCTCAGTCAGCTGCTTGTTGGGCCTTTCAGAGGGTAGAC  650

seq1  ATGCTATGCTCCTGTCTGTAAGTATGCCATGGCATCTGAGTCATTCTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATGCTCCTGTCTGTAAGTATGCCATGGCATCTGAGTCATTCTGAT  700

seq1  TGGTGTAAGGTGGAATCTCAGGGTACTTTTAACTTGTGTTTCCCTGATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTAAGGTGGAATCTCAGGGTACTTTTAACTTGTGTTTCCCTGATTA  750

seq1  CTGAAAACTTTGAACATTTTTAAGTGCCTCTCAGTTATTTGAGATTCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAACTTTGAACATTTTTAAGTGCCTCTCAGTTATTTGAGATTCCTC  800

seq1  TG  802
      ||
seq2  TG  802