BAC Information

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BAC

Clone NameB6Ng01-257F04
Chromosome6 (Build37)
Map Location 25,019,208 - 25,020,319
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041082, Slc13a1, LOC100041094, Iqub, Ndufa5, Asb15, EG626715, Lmod2, Wasl, 4932701A20Rik, Hyal4, Spam1, Hyal5, 6332401O19Rik, LOC384358
Downstream geneGpr37, Pot1a, EG626912
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257F04.bB6Ng01-257F04.g
ACCGA063052GA063053
length1,0521,098
definitionB6Ng01-257F04.b B6Ng01-257F04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaatgaggaataccgaatggctgagaaacacctaaaaaaatg
ttcaacatccttagtcatcagggaaatacaaatcaaaacaaccctgagat
tccacctcacaccagtcagaacggcttagatcatcaactcaggtaacagc
agatgctgtcaaggatgtggagaaagaggaaccctcctccattgctggta
ggattgcaagctgctacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaagatccagaaatacctctccttggc
atataccaagaagatgttccaactggtaataaggacacatgctccactat
gttcatagcagccttatttacaatagccagaagctggaaagaactcagat
gtccctcaacagaggaatggatacagaaaatgtggtacattaacatgcag
tactactcagctattaaaaacaatgacttcatgaaattcccaggcaaatg
gatggaacttaaaaacatcctgagtgaagtaacccagtcacaaaagaaca
cacatggtatgcactcactgataagtggatattagcccaaaatttcataa
tatccaattcacagaccatatgaagctcaagaaggaagaccaaagtgtgg
gtgcttcagtgtggatgcttcagtgcttcattgaaggggcaacaaaatac
tcacaggaggaaatatggagacaatatatggagcagagaccgaaggaaag
gcaatctaaagactgccccacctgaggatcaatccactatacagccatta
aacctggacactattgtggatgcagggaactggttgttgcttggaacctg
acatggctgtctccttagaggctctttcagagcctgacaaattgaggcgg
atgctagcagccaaccattgggattgagcagcgcaggtctcagatggaga
gggtggagttggagaagggattgaagaaactaggggtttgctgccccatg
gggggagaaacagtgccaatgggtcaatccctttactagatctcccggga
ct
gaattctgggagatactcagaaagagagtaagctaggtggtacctccagt
gggagggggaacagcaggcacagtgctaaatagattgggatgagagtgaa
cccacatgatggcaggcatggcttccatccagagtaaggtgagagagggc
agtgatgtcagacagcaactgaagcaaagatttggcactagcagtggccc
tggatgggctgcttggtggatggttgccagaactagagtattataaggac
attcactagactccaaggaataaaatctaatattctgcatatccagttga
cagacagccttttaaaacatttcacaagccaagaagaatagtagaactga
atttagtatccagatttcaggggtagcattttaaatcattgtaacacaat
ctctttggtaaaaccaaaaaaaaaatatatgcaaacttgcattttcaata
ttttaactctataatttatatgaagcttgctaacatgtaaatcatcctgt
taatgtcatggattgtaattgacaaaataatgtctctggatgcaagagaa
gtttctaccaggtttaacctagtagtagtcttaattacagcttgaaattt
cctgtgatatcaatagaagcacaaagaaggaatgtctcctgtggtcagga
tagaggtcagaccttgctgacacctgtggagaacataaaaactgcatcta
acttttcactgaagcccctgaacctctgtagcaatttaataagctagcat
attagagaactaaaagaatgatctcgatagaagaaagtacattttgggtc
ttagaaagttgtcagaaaagtctatgtgtttctagaaatatcatattaag
ttagaaaagatctgtaccatctgccattcatgtgcacttaggggaaatat
aagaagctaggtaataaagggagaggagctctgctgcgggagagtatgat
acagaggcaggagggacagatgcagagccctcagcatccacaggagggca
gaggcagagcaggagcatcctatagagcagcatccagaggtcaccttaga
agccttgcaatacacaccaaaccaagaacatatatatgctgtgccctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_25019208_25020319
seq2: B6Ng01-257F04.g_67_1164 (reverse)

seq1  CAGGGCACAGCATATATATGTTCTTGGTTTTGGTGTGTTATTTCCAAGGC  50
      ||||||||||||||||||||||||||| ||||||||||   || ||||||
seq2  CAGGGCACAGCATATATATGTTCTTGG-TTTGGTGTGT--ATTGCAAGGC  47

seq1  TTTCTAAGGTGACCTCCTGGGATGCTGCTTCTTATTAGGATGCTTCCTGC  100
       |||||||||||||||   ||||||||| |||   |||||||| ||||||
seq2  -TTCTAAGGTGACCTC--TGGATGCTGC-TCT--ATAGGATGC-TCCTGC  90

seq1  TCTGCCCTCTGCCCTCCTGTGGATGCTGAGGGCCTCCTGCATCTGTCCCT  150
      |||| ||||||||||||||||||||||||||||   ||||||||||||||
seq2  TCTG-CCTCTGCCCTCCTGTGGATGCTGAGGGC--TCTGCATCTGTCCCT  137

seq1  CCTGCCTCTGTATCATACTCTCCCCGCAGCAGAGCTCCTCTCCCTTTATT  200
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCTGCCTCTGTATCATACTCT-CCCGCAGCAGAGCTCCTCTCCCTTTATT  186

seq1  ACCTAGCTTCTTATATTTCCCCTAAGTGCACATGAATGGCAGATGGTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGCTTCTTATATTTCCCCTAAGTGCACATGAATGGCAGATGGTACA  236

seq1  GATCTTTTCTAACTTAATATGATATTTCTAGAAACACATAGACTTTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTTCTAACTTAATATGATATTTCTAGAAACACATAGACTTTTCTG  286

seq1  ACAACTTTCTAAGACCCAAAATGTACTTTCTTCTATCGAGATCATTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTTCTAAGACCCAAAATGTACTTTCTTCTATCGAGATCATTCTTT  336

seq1  TAGTTCTCTAATATGCTAGCTTATTAAATTGCTACAGAGGTTCAGGGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTCTAATATGCTAGCTTATTAAATTGCTACAGAGGTTCAGGGGCT  386

seq1  TCAGTGAAAAGTTAGATGCAGTTTTTATGTTCTCCACAGGTGTCAGCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGAAAAGTTAGATGCAGTTTTTATGTTCTCCACAGGTGTCAGCAAG  436

seq1  GTCTGACCTCTATCCTGACCACAGGAGACATTCCTTCTTTGTGCTTCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGACCTCTATCCTGACCACAGGAGACATTCCTTCTTTGTGCTTCTAT  486

seq1  TGATATCACAGGAAATTTCAAGCTGTAATTAAGACTACTACTAGGTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATCACAGGAAATTTCAAGCTGTAATTAAGACTACTACTAGGTTAAA  536

seq1  CCTGGTAGAAACTTCTCTTGCATCCAGAGACATTATTTTGTCAATTACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTAGAAACTTCTCTTGCATCCAGAGACATTATTTTGTCAATTACAA  586

seq1  TCCATGACATTAACAGGATGATTTACATGTTAGCAAGCTTCATATAAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGACATTAACAGGATGATTTACATGTTAGCAAGCTTCATATAAATT  636

seq1  ATAGAGTTAAAATATTGAAAATGCAAGTTTGCATATATTTTTTTTTTGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTTAAAATATTGAAAATGCAAGTTTGCATATATTTTTTTTTTGGT  686

seq1  TTTACCAAAGAGATTGTGTTACAATGATTTAAAATGCTACCCCTGAAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCAAAGAGATTGTGTTACAATGATTTAAAATGCTACCCCTGAAATC  736

seq1  TGGATACTAAATTCAGTTCTACTATTCTTCTTGGCTTGTGAAATGTTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATACTAAATTCAGTTCTACTATTCTTCTTGGCTTGTGAAATGTTTTA  786

seq1  AAAGGCTGTCTGTCAACTGGATATGCAGAATATTAGATTTTATTCCTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTGTCTGTCAACTGGATATGCAGAATATTAGATTTTATTCCTTGG  836

seq1  AGTCTAGTGAATGTCCTTATAATACTCTAGTTCTGGCAACCATCCACCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAGTGAATGTCCTTATAATACTCTAGTTCTGGCAACCATCCACCAA  886

seq1  GCAGCCCATCCAGGGCCACTGCTAGTGCCAAATCTTTGCTTCAGTTGCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCCATCCAGGGCCACTGCTAGTGCCAAATCTTTGCTTCAGTTGCTG  936

seq1  TCTGACATCACTGCCCTCTCTCACCTTACTCTGGATGGAAGCCATGCCTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACATCACTGCCCTCTCTCACCTTACTCTGGATGGAAGCCATGCCTG  986

seq1  CCATCATGTGGGTTCACTCTCATCCCAATCTATTTAGCACTGTGCCTGCT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATGTGGGTTCACTCTCATCCCAATCTATTTAGCACTGTGCCTGCT  1036

seq1  GTTCCCCCTCCCACTGGAGGTACCACCTAGCTTACTCTCTTTCTGAGTAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCCCTCCCACTGGAGGTACCACCTAGCTTACTCTCTTTCTGAGTAT  1086

seq1  CTCCCAGAATTC  1112
      ||||||||||||
seq2  CTCCCAGAATTC  1098