BAC Information

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BAC

Clone NameB6Ng01-257F15
Chromosome6 (Build37)
Map Location 62,498,821 - 62,614,174
singlet/doubletdoublet
Overlap genenone
Upstream geneC130092O11Rik
Downstream geneGA_x5J8B7W6GG0-4757855-4757501, LOC667099, Grid2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257F15.bB6Ng01-257F15.g
ACCGA063074GA063075
length1,1921,164
definitionB6Ng01-257F15.b B6Ng01-257F15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,612,961 - 62,614,174)(62,498,821 - 62,499,608)
sequence
gaattcataaaaaactaagagaagagatgaatttcaataatcagtataaa
atgaataaacaataaatatatgtaatgttaagttatataaaaatagatac
caagtaagatcaccacgttattcattgtagtacttcccttgatcttgatg
caattttcattcagaaaattagaagtcataagtagcacctggttgaaaat
ttcagaaagagagagagagagagagggagagagagagaaaaaaaagagag
agacatagtcatttttctgagttacttgattttgtttgactttttacaat
gaaattattcttaagattctttttgctagatactagtagccccatactag
ataaagtggtttgacttgaaaattgtactcttgattaggaaaaaaccagt
tgtatttgaaatgtaatttccttaatgctcaggtctcctttctatacttc
cccttgtgactttttaaggactcaatttacccttgggacttttatacttt
gcaaagaattagttcaaaatgagaacttgactatatttagttatgttttc
agtatcattggatatattattccattagcaatgggacaacaggatgcttg
ttcaactttggaactgggatactgagaagacattcatcttgtgagccttg
taataaaaccatataggcactgataggccaaagtcaagcttcactgtccc
ctggaaagtaaacaatgaatcttattgaagcagtttgacaggaaaacaat
tgtttccgtctggaagaagaggagaataggatgtgttcatcatcgtgcac
acggcaagtctcagaaatggtgatgacttccgcctcaagcttgtgcaact
gagagccagtcatgcaggaccttctgctggagcaggttacatacagggca
ctgctctgctctcttattcttgtctgacaccacagtcttatggacattgg
agagaaagagtctccctgaggtgagacaaagacatcgtcttgacttttta
cttcatatttcttagtaaacgccaatggtatttcccactttactgcataa
gttcccaaaacagaaactagaaacatgaaagtttggctcatgagttatga
tttattatttatgtaacaataagtaatgttctgcgtgttgaaaattacct
caattctgtgatcaattaagcagccactgagaacaaaggtgg

gaattctttatttggctctataccccatatcttttttattttattttatt
ttattttattttatttttatttttttattaggtattttcctcatttacat
tttctttttttttaattttttattaggtatttagctcatttacatttcca
atgctataccaaaagtcccccatacccacccacccccaatcccctaccca
tccactccccctttttggccctggcgttcccctgtactggggcatataaa
ttttgcgtgtccaatgggcctctctttccagtgatggccgactaggccat
cttttgatacatatgcagctagagtcaagagctccggggtactggttagt
tcataatgttgtttcacctatagggttgcagatccctttagctccttggt
gtaccccatttctaatagggttatttggggtttttttgagtccatattct
tgatttcatatatatatatattggatattagccccctgtcagatttagga
ttggtaaagatcttttcccaactgttagttgccattttgtcttattgaca
gtgccctttgccttacagaagctttgcagttttatgaggtcaattcttca
cagctttagggcaatttgcaaattcatctggaaaaacaaaaactattctc
aataataaaagaacctctggtgaaatcacaatccctgacctcaagctgta
ctacagagcaactatgataaaatctgtgtggtactggtacaatgacagac
aaatcaatggaacagaattaagacccagaaatgaattcacacacctatgg
tcacttgatctttgacacagagctaaaaccatcccattggaaagaagacc
gcatcttcataatatggtgtttcttaatgaatattaatactcttacaatg
tcactactgaatttcagttgctcttatttatgtaaataacagcttattcg
aaataatccagtgtcttcttaaaccattcatgatatgaaatggcctgaat
tattgatttagatttacccaagaataagaggctgtgggatttaattaatg
tgcctgcaattacacttgtatatagctcagatattgggcggtagtgtgcc
attaagatctatggagtcacccaatggtggacagtacctttaaataatca
ggcttagaatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_62612961_62614174
seq2: B6Ng01-257F15.b_46_1237 (reverse)

seq1  CCACCTTTTGTCTCTAGT-GCTGCTTTATATTTGATCACACGAATTTGAA  49
      ||||||||  |||| ||| ||||||   || ||||||||| ||| |||| 
seq2  CCACCTTTGTTCTC-AGTGGCTGCT---TAATTGATCACA-GAA-TTGAG  44

seq1  GTAATTTTTCACACGCAGAACAATTAATTTATTGTTACATAAATAATTAA  99
      ||||||||  ||||||||||||  | | |||||||||||||||||| |||
seq2  GTAATTTTCAACACGCAGAACA--TTACTTATTGTTACATAAATAA-TAA  91

seq1  ATTCCATAAAACTCATGAAGGCCAAACCTTTCATTGTTTTCTAAGGTTTC  149
      ||  |||  |||||||||  |||||| |||||||   ||||||  |||||
seq2  AT--CAT--AACTCATGA--GCCAAA-CTTTCAT--GTTTCTA--GTTTC  130

seq1  TGTTTTGGGAAC-TATGCAGTAAAGTGGGAAATACCATTGGCGTTTACTA  198
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGGGAACTTATGCAGTAAAGTGGGAAATACCATTGGCGTTTACTA  180

seq1  AGAAATATGAAGTTAAAAAGTCAAGACGATGTCTTTTGTCTCACCTCAGG  248
      |||||||||||| |||||||||||||||||||| ||||||||||||||||
seq2  AGAAATATGAAG-TAAAAAGTCAAGACGATGTC-TTTGTCTCACCTCAGG  228

seq1  GAGACTCTTTTCTCTCCAATGTCCATAAGACTGTGGTGTCAGACAAGAAT  298
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTC-TTTCTCTCCAATGTCCATAAGACTGTGGTGTCAGACAAGAAT  277

seq1  AAGAGAGCAGAGCAGTGCCCTGTATGTAACCCTGCTCCAGCAGAAGGTCC  348
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AAGAGAGCAGAGCAGTGCCCTGTATGTAA-CCTGCTCCAGCAGAAGGTCC  326

seq1  TGCATGACTGGCTCTCAGTTGCACAAGCTTGAGGCGGAAGTCATCACCAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGACTGGCTCTCAGTTGCACAAGCTTGAGGCGGAAGTCATCACCAT  376

seq1  TTCTGAGACTTGCCGTGTGCACGATGATGAACACATCCTATTCTCCTCTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGACTTGCCGTGTGCACGATGATGAACACATCCTATTCTCCTCTT  426

seq1  CTTCCAGACGGAAACAATTGTTTTCCTGTCAAACTGCTTCAATAAGATTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGACGGAAACAATTGTTTTCCTGTCAAACTGCTTCAATAAGATTC  476

seq1  ATTGTTTACTTTCCAGGGGACAGTGAAGCTTGACTTTGGCCTATCAGTGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTACTTTCCAGGGGACAGTGAAGCTTGACTTTGGCCTATCAGTGC  526

seq1  CTATATGGTTTTATTACAAGGCTCACAAGATGAATGTCTTCTCAGTATCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATGGTTTTATTACAAGGCTCACAAGATGAATGTCTTCTCAGTATCC  576

seq1  CAGTTCCAAAGTTGAACAAGCATCCTGTTGTCCCATTGCTAATGGAATAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCAAAGTTGAACAAGCATCCTGTTGTCCCATTGCTAATGGAATAA  626

seq1  TATATCCAATGATACTGAAAACATAACTAAATATAGTCAAGTTCTCATTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCAATGATACTGAAAACATAACTAAATATAGTCAAGTTCTCATTT  676

seq1  TGAACTAATTCTTTGCAAAGTATAAAAGTCCCAAGGGTAAATTGAGTCCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTAATTCTTTGCAAAGTATAAAAGTCCCAAGGGTAAATTGAGTCCT  726

seq1  TAAAAAGTCACAAGGGGAAGTATAGAAAGGAGACCTGAGCATTAAGGAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGTCACAAGGGGAAGTATAGAAAGGAGACCTGAGCATTAAGGAAA  776

seq1  TTACATTTCAAATACAACTGGTTTTTTCCTAATCAAGAGTACAATTTTCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTCAAATACAACTGGTTTTTTCCTAATCAAGAGTACAATTTTCA  826

seq1  AGTCAAACCACTTTATCTAGTATGGGGCTACTAGTATCTAGCAAAAAGAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAACCACTTTATCTAGTATGGGGCTACTAGTATCTAGCAAAAAGAA  876

seq1  TCTTAAGAATAATTTCATTGTAAAAAGTCAAACAAAATCAAGTAACTCAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAGAATAATTTCATTGTAAAAAGTCAAACAAAATCAAGTAACTCAG  926

seq1  AAAAATGACTATGTCTCTCTCTTTTTTTTCTCTCTCTCTCCCTCTCTCTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGACTATGTCTCTCTCTTTTTTTTCTCTCTCTCTCCCTCTCTCTC  976

seq1  TCTCTCTCTTTCTGAAATTTTCAACCAGGTGCTACTTATGACTTCTAATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTTTCTGAAATTTTCAACCAGGTGCTACTTATGACTTCTAATT  1026

seq1  TTCTGAATGAAAATTGCATCAAGATCAAGGGAAGTACTACAATGAATAAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAATGAAAATTGCATCAAGATCAAGGGAAGTACTACAATGAATAAC  1076

seq1  GTGGTGATCTTACTTGGTATCTATTTTTATATAACTTAACATTACATATA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGATCTTACTTGGTATCTATTTTTATATAACTTAACATTACATATA  1126

seq1  TTTATTGTTTATTCATTTTATACTGATTATTGAAATTCATCTCTTCTCTT  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGTTTATTCATTTTATACTGATTATTGAAATTCATCTCTTCTCTT  1176

seq1  AGTTTTTTATGAATTC  1214
      ||||||||||||||||
seq2  AGTTTTTTATGAATTC  1192


seq1: chr6_62498821_62499608
seq2: B6Ng01-257F15.g_436_1227

seq1  GGGTTGCAGATCCCTTTAGCTCCTTGGTGTACCCCATTTCTAATAGGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGCAGATCCCTTTAGCTCCTTGGTGTACCCCATTTCTAATAGGGTT  50

seq1  ATTTGGGGTTTTTTTGAGTCCATATTCTTGATTTCATATATATATATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGGTTTTTTTGAGTCCATATTCTTGATTTCATATATATATATATT  100

seq1  GGATATTAGCCCCCTGTCAGATTTAGGATTGGTAAAGATCTTTTCCCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTAGCCCCCTGTCAGATTTAGGATTGGTAAAGATCTTTTCCCAAC  150

seq1  TGTTAGTTGCCATTTTGTCTTATTGACAGTGCCCTTTGCCTTACAGAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTTGCCATTTTGTCTTATTGACAGTGCCCTTTGCCTTACAGAAGC  200

seq1  TTTGCAGTTTTATGAGGTCAATTCTTCACAGCTTTAGGGCAATTTGCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGTTTTATGAGGTCAATTCTTCACAGCTTTAGGGCAATTTGCAAA  250

seq1  TTCATCTGGAAAAACAAAAACTATTCTCAATAATAAAAGAACCTCTGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTGGAAAAACAAAAACTATTCTCAATAATAAAAGAACCTCTGGTG  300

seq1  AAATCACAATCCCTGACCTCAAGCTGTACTACAGAGCAACTATGATAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACAATCCCTGACCTCAAGCTGTACTACAGAGCAACTATGATAAAA  350

seq1  TCTGTGTGGTACTGGTACAATGACAGACAAATCAATGGAACAGAATTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGGTACTGGTACAATGACAGACAAATCAATGGAACAGAATTAAG  400

seq1  ACCCAGAAATGAATTCACACACCTATGGTCACTTGATCTTTGACACAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ACCCAGAAATGAATTCACACACCTATGGTCACTTGATCTTTGACACA-GA  449

seq1  GCTAAAACCAT-CCATTGGAAAGAAGACCGCATCTTCAATAATATGGTGT  499
      ||||||||||| ||||||||||||||||||||||||| ||||||||||||
seq2  GCTAAAACCATCCCATTGGAAAGAAGACCGCATCTTC-ATAATATGGTGT  498

seq1  TTCTTAATGAATATTAATACTCTTACAATGTCACTACTGAATTTCAGTTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAATGAATATTAATACTCTTACAATGTCACTACTGAATTTCAGTTG  548

seq1  CTCTTATTTATGTAAATAACAGC-TATTCGAAAT-ATCCAGTGTCTTCTT  597
      ||||||||||||||||||||||| |||||||||| |||||||||||||||
seq2  CTCTTATTTATGTAAATAACAGCTTATTCGAAATAATCCAGTGTCTTCTT  598

seq1  AAACCATTCATGATAATGAAATGG-CTG-ATTA-TGATTTAGA-TTAACC  643
      |||||||||||||| ||||||||| ||| |||| ||||||||| ||| ||
seq2  AAACCATTCATGAT-ATGAAATGGCCTGAATTATTGATTTAGATTTACCC  647

seq1  AAG-ATAAGAAGCTGT--GATTAAATAATTGTG-CTGCAAATACAC-TGT  688
      ||| |||||| |||||  |||| ||| | |||| |||||| ||||| |||
seq2  AAGAATAAGAGGCTGTGGGATTTAATTAATGTGCCTGCAATTACACTTGT  697

seq1  ATA-AG-TCAGATATTGGGGGTTAAGTGTGGCAATAAGAATCTATGGAAG  736
      ||| || |||||||||||| | | |||||| || |||| |||||||||  
seq2  ATATAGCTCAGATATTGGGCGGT-AGTGTGCCATTAAG-ATCTATGGA--  743

seq1  GTACACCCAAATTGTAGACAGTACTATAAATATAATCAGGCCTTAG-ATA  785
      || ||||| ||| || ||||||||  | || ||||||||| ||||| |||
seq2  GT-CACCC-AATGGTGGACAGTACCTTTAA-ATAATCAGG-CTTAGAATA  789

seq1  TAT  788
      |||
seq2  TAT  792


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