BAC Information

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BAC

Clone NameB6Ng01-257J07
Chromosome6 (Build37)
Map Location 35,890,998 - 35,892,142
singlet/doubletsinglet
Overlap genenone
Upstream gene2010107G12Rik, Cnot4, Nup205, 1810058I24Rik, Slc13a4, BC064033, 1700065J11Rik, Mtpn, LOC100039312, LOC100039327
Downstream gene9330158H04Rik, Chrm2, EG620863, LOC100039370, Ptn, LOC100039514, Dgki
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257J07.bB6Ng01-257J07.g
ACCGA063243GA063244
length5051,138
definitionB6Ng01-257J07.b B6Ng01-257J07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttgtttagttctgtgccccattttttaatggagtgatttgaatttctgg
attgcaacttcttgagctctttgtatatattggatattagccccctatca
gatttaggattggtaaaaatcctttcccaatctgttggtggcctttttgt
cttattgacagtgtcttttgccttacagaagctttgcaattttataaggt
cccatttgttaattcttgatcttacagcacaagccattgttgttctgttt
agaaatttttcccctgtgcccatatcttcgaggcttttccccactttctc
ctctataaatttcagtgtctctggttttatatggagttcccagagcttgt
gtctctagctgtatatgtagcagaagatggcctatcggccatcactggga
agagaggccccttggtattgcaaactttatatgccccagtacaggggaat
gccaggaccaagaagtcgggatgggtgggtagtggagcagggtcggggag
ggtat
gaattcagcatctggcttcatcattcatggtcatgtcgctcagacacact
gctccctctttcctatcatctgtcatgagatgttatgggtatgtcatgag
ttatcatgatttaaaatgaagctttgcaaaaggaagctctaaaaactatc
tggagcacattatctttaatcagaacttcaaaaacttaaatttaaatgat
agctaaaatagccctaaaatttgaaaaatcataataacgtacaaaatcat
ttaaaaaccaaactgaaatgtgtatagtatttaggaacaaattcaatctc
cttcatgttcctaataattgataacagataaagtgctgaaaagaaatact
gacagagtacatgggaggttttgcaaagtaagctatgtgcagccaatgat
ctctctctttccatacctatgtgaaatatggtgacatgagtcctttaagt
gttctttttattaagagtaattaagagtaatttttaaaatttctgtatga
catataaaccagatttcagttttacagcatagactttggtgtttttgtaa
taatggcattggaataatttaggaaaaatttttattctaacattattgag
ctgaaggctcatgactaccatccaggttttcctgtgtggatgttgctgtt
acttcttcacgcccttaacaccagtatgtggtcagatgttctgcatcagt
gtggcgtctgagctgtgctctttgagggtgacagattctggagtatgaca
cacccattgtcatacaaaggtcaacttatggatctttgagatccagattt
aaggccctttttatgtgaggtttttgctttctcctccccaactttacaaa
taatgatgtttttcctctatattaaagaaaaatgtatattagctatatca
cagaaagaatcccataaaaacctatgaaaatacaccaagaaattcccaaa
cagaaaacacatttttcttcaattacatattttgtgattttcttaaaaat
tcgaatccctaaatttgacaacaatttctagagttcaagaacatttggga
ataaatttattagctggaataatttcaaagtattaaatttataatacatg
agccagtagttaaggtagcattaactaaaactagtcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_35890998_35892142
seq2: B6Ng01-257J07.g_68_1205

seq1  GAATTCAGCATCTGGCTTCATCATTCATGGTCATGTCGCTCAGACACACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATCTGGCTTCATCATTCATGGTCATGTCGCTCAGACACACT  50

seq1  GCTCCCTCTTTCCTATCATCTGTCATGAGATGTTATGGGTATGTCATGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCTCTTTCCTATCATCTGTCATGAGATGTTATGGGTATGTCATGAG  100

seq1  TTATCATGATTTAAAATGAAGCTTTGCAAAAGGAAGCTCTAAAAACTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATGATTTAAAATGAAGCTTTGCAAAAGGAAGCTCTAAAAACTATC  150

seq1  TGGAGCACATTATCTTTAATCAGAACTTCAAAAACTTAAATTTAAATGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCACATTATCTTTAATCAGAACTTCAAAAACTTAAATTTAAATGAT  200

seq1  AGCTAAAATAGCCCTAAAATTTGAAAAATCATAATAACGTACAAAATCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAAATAGCCCTAAAATTTGAAAAATCATAATAACGTACAAAATCAT  250

seq1  TTAAAAACCAAACTGAAATGTGTATAGTATTTAGGAACAAATTCAATCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAACCAAACTGAAATGTGTATAGTATTTAGGAACAAATTCAATCTC  300

seq1  CTTCATGTTCCTAATAATTGATAACAGATAAAGTGCTGAAAAGAAATACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGTTCCTAATAATTGATAACAGATAAAGTGCTGAAAAGAAATACT  350

seq1  GACAGAGTACATGGGAGGTTTTGCAAAGTAAGCTATGTGCAGCCAATGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGTACATGGGAGGTTTTGCAAAGTAAGCTATGTGCAGCCAATGAT  400

seq1  CTCTCTCTTTCCATACCTATGTGAAATATGGTGACATGAGTCCTTTAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTTTCCATACCTATGTGAAATATGGTGACATGAGTCCTTTAAGT  450

seq1  GTTCTTTTTATTAAGAGTAATTAAGAGTAATTTTTAAAATTTCTGTATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTTTATTAAGAGTAATTAAGAGTAATTTTTAAAATTTCTGTATGA  500

seq1  CATATAAACCAGATTTCAGTTTTACAGCATAGACTTTGGTGTTTTTGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAACCAGATTTCAGTTTTACAGCATAGACTTTGGTGTTTTTGTAA  550

seq1  TAATGGCATTGGAATAATTTAGGAAAAATTTTTATTCTAACATTATTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGCATTGGAATAATTTAGGAAAAATTTTTATTCTAACATTATTGAG  600

seq1  CTGAAGGCTCATGACTACCATCCAGGTTTTCCTGTGTGGATGTTGCTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGCTCATGACTACCATCCAGGTTTTCCTGTGTGGATGTTGCTGTT  650

seq1  ACTTCTTCACGCCCTTAACACCAGTATGTGGTCAGATGTTCTGCATCAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTCACGCCCTTAACACCAGTATGTGGTCAGATGTTCTGCATCAGT  700

seq1  GTGGCGTCTGAGCTGTGCTCTTTGAGGGTGACAGATTCTGGAGTATGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCGTCTGAGCTGTGCTCTTTGAGGGTGACAGATTCTGGAGTATGACA  750

seq1  CACCCATTGTCATACAAAGGTCAACTTATGGATCTTTGAGATCCAGATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCATTGTCATACAAAGGTCAACTTATGGATCTTTGAGATCCAGATTT  800

seq1  AAGGCCCTTTTTATGTGAGGTTTTTGCTTTCTCCTCCCCAACTTTACAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCCTTTTTATGTGAGGTTTTTGCTTTCTCCTCCCCAACTTTACAAA  850

seq1  TAATGATGTTTTTCCTCTATATTAAAGAAAAATGTATATTAGCTATATCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATGTTTTTCCTCTATATTAAAGAAAAATGTATATTAGCTATATCA  900

seq1  CAGAAAGAATCCCATAAAAACCTATGAAAATACACCAAG-AATTCCCAAA  949
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CAGAAAGAATCCCATAAAAACCTATGAAAATACACCAAGAAATTCCCAAA  950

seq1  CAGAAAACACA-TTTTCTTCAAATTACATATTTTGTGATTTTCTTAAAAA  998
      ||||||||||| |||||||| |||||||||||||||||||||||||||||
seq2  CAGAAAACACATTTTTCTTC-AATTACATATTTTGTGATTTTCTTAAAAA  999

seq1  TTCGAAT-CCTAAATTTGAACAAACAATTTCTAAGAGTTCAAGAACATTT  1047
      ||||||| |||||||||||   |||||||||| |||||||||||||||||
seq2  TTCGAATCCCTAAATTTGA--CAACAATTTCT-AGAGTTCAAGAACATTT  1046

seq1  GGGAATAAAATTATTAAGCTGGGAATAAATTTCCAAAGTATTAAAATTTA  1097
      ||||||||| ||||| |||| |||||||  || ||||||||| |||||||
seq2  GGGAATAAATTTATT-AGCT-GGAATAA--TTTCAAAGTATT-AAATTTA  1091

seq1  TAATACAATGAAGCAAGTAG-TAAAGTAGCATTAACTAAAAATAGTCTA  1145
      |||||| ||| ||| ||||| ||| |||||||||||||||| |||||||
seq2  TAATAC-ATG-AGCCAGTAGTTAAGGTAGCATTAACTAAAACTAGTCTA  1138