BAC Information

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BAC

Clone NameB6Ng01-258L19
Chromosome6 (Build37)
Map Location 128,319,808 - 128,445,553
singlet/doubletdoublet
Overlap geneFoxm1, Nrip2, Itfg2, Fkbp4, EG667598, Pzp
Upstream geneLOC100043848, Parp11, Efcab4b, Prmt8, Tspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik
Downstream geneLOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258L19.bB6Ng01-258L19.g
ACCGA064098GA064099
length1,203653
definitionB6Ng01-258L19.b B6Ng01-258L19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,444,348 - 128,445,553)(128,319,808 - 128,320,460)
sequence
gaattctacagtgtgtagccatgcccaactgacctacttcatatgtaaag
cctgtctaaagaaatgcctcttcctctgttcacacagaactcccaggcat
ttacaccattcctaataaccctcaagtcccatgttgcaaacatctaaact
tcaaagtatgtgctgtcgtttaccccctccttctgattctttctacctgt
ctgggtttggaaacagatccgagtggacctagagatttctcctgatttcc
tggcagtcccagtggggggccatgaaaactctcattgcatctgtggaaat
gaaaggaaaaccgtgtcctgggctgtgaccccaaagtcgctgggtgagtg
gcaaagctgtcaactggtttcatgctttgtgtggcaatggtttgtcctgg
ctctgatcccagggcattctactccccttgagtttaactgatcaactaag
caggaaactctacactgtgggggaggataacatttaacgcagaataactg
tggttctcgggattttcaaatacgcgtatttgctgtatgtgtgccccgat
gcacgtgtggaggtcagatgacaacttgtgggaagtggttgtctaattct
accacgtgggttccagggatcgagcccagggtgtcaggcttggcagctga
gttatctcactggcctgggcattaccatttaaagccatcaaaattttatc
tcccaggggaggtgaacttcacagctaccgcagaagccttgcagtctcca
gaattgtgtggcaataagttgacagaagtgccagcccttgtacacaagga
cactgtggtgaagtccgtaatagttgaggtgtgtgagcactgagtctaac
gtttgacatcatgtttgtaatctgggtgactgtatcgcatttccaagttt
gtgtataggcctacagatcaattatttttaatacttaaaagtgactgttc
tggggccttttttacttctatgtgatgtgtcttgtatgtgacgtgttttt
tttatttggcatgtgacataccattttaccttttttttttaaccttcatg
cttaagcctgacgattgagaaggagcaacgttacaaccacactgttatgc
ccacaagtaggtggttacaaaacatattctctcagaataagcccatgtta
ctagattcgacctggtggcaaaaaaccaatctctggattggcatactctg
aag
gaattctaagacagagtctttgtcagaatcacacagtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcg
cgcgcgtgtgtgtgtgcgtgtgtgtgcgcgtgtgtgtgcgcgcgcgcatg
cgcgcgcccatgctcgcatgcttcgcttacttatatgctcgtgggacaag
gggtgtgtgtattatgtgagcatgcaaagatcagaggacagcttgctgga
gttatttctcttgatgggagttctgggactgagcgcaggatggcagcagg
tacccacttttcaatccctttcattgaaaagcttggatagaaatggactt
tgtcaggctggagctcagtggcagagttcttccctgccgtgcactagagc
ccggctttgaagtggggtttgccagaaagactgaccttgaaccagcatgt
gaccttgtgtcctctctgctgcctgtcctgtgctgcatgtctgcaatgtt
gacaccaggcctaccagaaactcatgccacaggtagcagtgcttccattg
tatctgatcctcagattggcacagtccagtctctgagataggatcttgct
ccgttactgtatcttcctgcttcaccttcctgcgttccacacatatgggc
aca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128444348_128445553
seq2: B6Ng01-258L19.b_48_1250 (reverse)

seq1  CTTCAGAGTAATCCATATCCCAGAGATTGTTTTTTTTTCCCACAGTTAGA  50
      ||||||||||  ||| || ||||||||||  |||||| ||  ||| | ||
seq2  CTTCAGAGTATGCCA-AT-CCAGAGATTG-GTTTTTTGCCACCAGGTCGA  47

seq1  AATTCTAGT-ACAT-GGCTTAATCTGAGA-ATTTTGTTTTGTTA-CACTT  96
      |  |||||| |||| |||||| ||||||| | | |||||||| | ||| |
seq2  A--TCTAGTAACATGGGCTTATTCTGAGAGAATATGTTTTGTAACCACCT  95

seq1  ACCTTGTGGGCATAACAGTGT-GTTGTACGTTTGCTCCTTCTCAATTCCT  145
      | ||||||||||||||||||| ||||||   |||||||||||||||  | 
seq2  A-CTTGTGGGCATAACAGTGTGGTTGTAACGTTGCTCCTTCTCAAT--CG  142

seq1  TCAGGCTT-AGCATTGAAAGTTAAAAAAAAAAGGTAAAATGGTATGTCAC  194
      |||||||| |||| |||| |||||||||||||||||||||||||||||||
seq2  TCAGGCTTAAGCA-TGAAGGTTAAAAAAAAAAGGTAAAATGGTATGTCAC  191

seq1  ATG-CAAATAAAAAAAACACGTCACATACAAGACACATCACATAGAAGTA  243
      ||| ||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATGCCAAATAAAAAAAACACGTCACATACAAGACACATCACATAGAAGT-  240

seq1  AAAAAAGGCCCCAGAACAGTCACTTTTAAGTATTAAAAATAATTGATCTG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGGCCCCAGAACAGTCACTTTTAAGTATTAAAAATAATTGATCTG  290

seq1  TAGGCCTATACACAAACTTGGAAATGCGATACAGTCACCCAGATTACAAA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCTATACACAAACTTGGAAATGCGATACAGTCACCCAGATTACAAA  340

seq1  CATGATGTCAAACGTTAGACTCAGTGCTCACACACCTCAACTATTACGGA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGTCAAACGTTAGACTCAGTGCTCACACACCTCAACTATTACGGA  390

seq1  CTTCACCACAGTGTCCTTGTGTACAAGGGCTGGCACTTCTGTCAACTTAT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACCACAGTGTCCTTGTGTACAAGGGCTGGCACTTCTGTCAACTTAT  440

seq1  TGCCACACAATTCTGGAGACTGCAAGGCTTCTGCGGTAGCTGTGAAGTTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACACAATTCTGGAGACTGCAAGGCTTCTGCGGTAGCTGTGAAGTTC  490

seq1  ACCTCCCCTGGGAGATAAAATTTTGATGGCTTTAAATGGTAATGCCCAGG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCCCTGGGAGATAAAATTTTGATGGCTTTAAATGGTAATGCCCAGG  540

seq1  CCAGTGAGATAACTCAGCTGCCAAGCCTGACACCCTGGGCTCGATCCCTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGAGATAACTCAGCTGCCAAGCCTGACACCCTGGGCTCGATCCCTG  590

seq1  GAACCCACGTGGTAGAATTAGACAACCACTTCCCACAAGTTGTCATCTGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCACGTGGTAGAATTAGACAACCACTTCCCACAAGTTGTCATCTGA  640

seq1  CCTCCACACGTGCATCGGGGCACACATACAGCAAATACGCGTATTTGAAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACACGTGCATCGGGGCACACATACAGCAAATACGCGTATTTGAAA  690

seq1  ATCCCGAGAACCACAGTTATTCTGCGTTAAATGTTATCCTCCCCCACAGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCGAGAACCACAGTTATTCTGCGTTAAATGTTATCCTCCCCCACAGT  740

seq1  GTAGAGTTTCCTGCTTAGTTGATCAGTTAAACTCAAGGGGAGTAGAATGC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGTTTCCTGCTTAGTTGATCAGTTAAACTCAAGGGGAGTAGAATGC  790

seq1  CCTGGGATCAGAGCCAGGACAAACCATTGCCACACAAAGCATGAAACCAG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGATCAGAGCCAGGACAAACCATTGCCACACAAAGCATGAAACCAG  840

seq1  TTGACAGCTTTGCCACTCACCCAGCGACTTTGGGGTCACAGCCCAGGACA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAGCTTTGCCACTCACCCAGCGACTTTGGGGTCACAGCCCAGGACA  890

seq1  CGGTTTTCCTTTCATTTCCACAGATGCAATGAGAGTTTTCATGGCCCCCC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTTTCCTTTCATTTCCACAGATGCAATGAGAGTTTTCATGGCCCCCC  940

seq1  ACTGGGACTGCCAGGAAATCAGGAGAAATCTCTAGGTCCACTCGGATCTG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGACTGCCAGGAAATCAGGAGAAATCTCTAGGTCCACTCGGATCTG  990

seq1  TTTCCAAACCCAGACAGGTAGAAAGAATCAGAAGGAGGGGGTAAACGACA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAACCCAGACAGGTAGAAAGAATCAGAAGGAGGGGGTAAACGACA  1040

seq1  GCACATACTTTGAAGTTTAGATGTTTGCAACATGGGACTTGAGGGTTATT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATACTTTGAAGTTTAGATGTTTGCAACATGGGACTTGAGGGTTATT  1090

seq1  AGGAATGGTGTAAATGCCTGGGAGTTCTGTGTGAACAGAGGAAGAGGCAT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGGTGTAAATGCCTGGGAGTTCTGTGTGAACAGAGGAAGAGGCAT  1140

seq1  TTCTTTAGACAGGCTTTACATATGAAGTAGGTCAGTTGGGCATGGCTACA  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAGACAGGCTTTACATATGAAGTAGGTCAGTTGGGCATGGCTACA  1190

seq1  CACTGTAGAATTC  1206
      |||||||||||||
seq2  CACTGTAGAATTC  1203

seq1: chr6_128319808_128320460
seq2: B6Ng01-258L19.g_69_721

seq1  GAATTCTAAGACAGAGTCTTTGTCAGAATCACACAGTGTGTGTGTGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGACAGAGTCTTTGTCAGAATCACACAGTGTGTGTGTGTGTG  50

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCG  100

seq1  CGCGCGTGTGTGTGTGCGTGTGTGTGCGCGTGTGTGTGCGCGCGCGCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGCGTGTGTGTGTGCGTGTGTGTGCGCGTGTGTGTGCGCGCGCGCATG  150

seq1  CGCGCGCCCATGCTCGCATGCTTCGCTTACTTATATGCTCGTGGGACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGCGCCCATGCTCGCATGCTTCGCTTACTTATATGCTCGTGGGACAAG  200

seq1  GGGTGTGTGTATTATGTGAGCATGCAAAGATCAGAGGACAGCTTGCTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGTGTATTATGTGAGCATGCAAAGATCAGAGGACAGCTTGCTGGA  250

seq1  GTTATTTCTCTTGATGGGAGTTCTGGGACTGAGCGCAGGATGGCAGCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTCTCTTGATGGGAGTTCTGGGACTGAGCGCAGGATGGCAGCAGG  300

seq1  TACCCACTTTTCAATCCCTTTCATTGAAAAGCTTGGATAGAAATGGACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACTTTTCAATCCCTTTCATTGAAAAGCTTGGATAGAAATGGACTT  350

seq1  TGTCAGGCTGGAGCTCAGTGGCAGAGTTCTTCCCTGCCGTGCACTAGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGGCTGGAGCTCAGTGGCAGAGTTCTTCCCTGCCGTGCACTAGAGC  400

seq1  CCGGCTTTGAAGTGGGGTTTGCCAGAAAGACTGACCTTGAACCAGCATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCTTTGAAGTGGGGTTTGCCAGAAAGACTGACCTTGAACCAGCATGT  450

seq1  GACCTTGTGTCCTCTCTGCTGCCTGTCCTGTGCTGCATGTCTGCAATGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGTGTCCTCTCTGCTGCCTGTCCTGTGCTGCATGTCTGCAATGTT  500

seq1  GACACCAGGCCTACCAGAAACTCAGGCCACAGGTAGCAGTGCTTCCATTG  550
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GACACCAGGCCTACCAGAAACTCATGCCACAGGTAGCAGTGCTTCCATTG  550

seq1  TATCTGATCCTCAGATTGGCACAGTCCAGTCTCTGAGATAGGATCTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGATCCTCAGATTGGCACAGTCCAGTCTCTGAGATAGGATCTTGCT  600

seq1  CCGTTACTGTATCTTCCTGCTTCACCTTCCTGCGTTCCACACATATGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTACTGTATCTTCCTGCTTCACCTTCCTGCGTTCCACACATATGGGC  650

seq1  ACA  653
      |||
seq2  ACA  653