BAC Information

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BAC

Clone NameB6Ng01-259D11
Chromosome6 (Build37)
Map Location 130,525,679 - 130,526,248
singlet/doubletsinglet
Overlap geneLOC667793
Upstream geneKlre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779
Downstream geneEG667798, EG625558, LOC625566, EG636947, LOC625628, EG625648, LOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259D11.bB6Ng01-259D11.g
ACCGA064456GA064457
length330780
definitionB6Ng01-259D11.b B6Ng01-259D11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
caagcccaggatccgctcaaggactacctagaatattggtgaaggacagg
gaacaaagttggatattgcttagatatttgccaagtcattacttggaggc
acttataataaaacaacattgaaagaagtcacaaagattcaatcacttac
taatgtaaggacaagtttgatgcattttttccaggatggttcctgaagac
ttagtttccatgaactttttgactagggactgtgtctaaatatttagaac
tgtcacgggagtcactactggggtttgtgttccaatggctggtgtgcgtt
tgtgtgtgtgtgtgtgtgggtgtgtgagtg
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaagacaaaacaccca
tggaaggagttacagagatggagtttggagctgagatgaaaggatggacc
atgtagagcctgccatagccagggatccaccccataatcagcatccaaac
gctgacaccattgcatacactagcaagagtttattgaaaggacgcagatg
tagctgtctcttgtgagactatgccggggcccagcaaacacagaagtgga
tgctcacagtcagctaatggatggatcatagggctcccaatggaggagct
agagaaagtagccaaggagctaaagggatctgcaaccctataggtggaac
aacattatgagctaaccagtaccccggagctcttgactctagctgcatat
atatcaaaagatggcctagtcggccatcactggaaagagaggcccattgg
acttgcaaactttatatgccccagtacaggggaacaccagggccaaaaag
ggggagtgggtgggcaggggagtgggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_130525679_130526248
seq2: B6Ng01-259D11.b_286_379 (reverse)

seq1  CACACACACACACACACACACACACACACAA---------------TGTA  35
      ||| ||||||| |||||||||||||||||||               || |
seq2  CACTCACACACCCACACACACACACACACAAACGCACACCAGCCATTGGA  50

seq1  ATGCAAATGCCCTAAATG--TCCCTGTACAGTTTGCTTGAAATACTAAAT  83
      |  ||||  ||   | ||  ||||   ||||||           ||||||
seq2  ACACAAACCCCAGTAGTGACTCCCGTGACAGTT-----------CTAAAT  89

seq1  ATATTTTCATTTTCAATAAGTAAAAGATGGCCTTTCCCTTTTCATCATAA  133
      || |                                              
seq2  ATTTA---------------------------------------------  94

seq1  ATTTGTGACGTCCTGTGATTTGAAAAAAATAAGAGTGAGAATTCTATTGT  183
                                                        
seq2  --------------------------------------------------  94

seq1  GGACAATATGAAGAATGCACTATGAACATCAACATTTTGACCAGAAAAGG  233
                                                        
seq2  --------------------------------------------------  94

seq1  ATTTGTAATCTTAAAGCTTCAACATCTTCCCCACCCATTGGATCCACTTA  283
                                                        
seq2  --------------------------------------------------  94

seq1  GAATTTTACCCTGGAACAGAAGCTATGTTCCTTGTAATACAAGTTATTTT  333
                                                        
seq2  --------------------------------------------------  94

seq1  ATGCATAAAACACACACACATACATACCCAGGAAAACTCATGGTTTTCTC  383
                                                        
seq2  --------------------------------------------------  94

seq1  TGCTCAACACATACACTCTTCAAAATTGTTGTCTTTGAATTTGTCAAAAG  433
                                                        
seq2  --------------------------------------------------  94

seq1  CAATCCAATCTATTTTTTGAAAAATATTTCTGTTGGCATTATCAATGAGA  483
                                                        
seq2  --------------------------------------------------  94

seq1  CACTGGAAGGTATGAATGCAATTACCCAGTATAAAATGAATCCTAAATAC  533
                                                        
seq2  --------------------------------------------------  94

seq1  ACCAAGGCAATAGTAGTAGACAGTTCTAAAGTATTTA  570
                                           
seq2  -------------------------------------  94