BAC Information

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BAC

Clone NameB6Ng01-259F14
Chromosome6 (Build37)
Map Location 126,329,270 - 126,330,338
singlet/doubletsinglet
Overlap genenone
Upstream genePlekhg6, Cd9, Vwf, Tmem16b, Ntf3, LOC100043565, LOC667427
Downstream geneLOC100043567, Kcna5, Kcna1, Kcna6, LOC667463, Ndufa9, Akap3, Dyrk4, Rad51ap1, D6Wsu163e, LOC667473, LOC624256, Fgf6, Fgf23, 9630033F20Rik, Ccnd2, Tpi-rs11, EG243642, LOC100043578, EG640703
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259F14.bB6Ng01-259F14.g
ACCGA064552GA064553
length1,2251,074
definitionB6Ng01-259F14.b B6Ng01-259F14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttttcagctctgagccccattttttaatggggttatttgatt
ttctggagtctatcttcttgagttctttatatatattggatattagtccc
ctatccgatttgggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaagcgttgcaatttta
tgaggtcccgtttatcgattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatcttcaaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttgactttagtacaaggagataggaatggatcaattcgc
atttttctacatgataaccaccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatctctgggtcttcaattctgttccattgg
tctacttgtctgtcactataccaataccatgcagtttttatcacaattgc
tctgtagtacagctttaggtcctgcatggtgattccactagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatctgccgattgccctttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaaagatagccatt
tttacaatgttgatcctgccaatcccatgagcatgggagatccttccatc
ttctgagatcttctttaatttctttcttcagagactttgaagttcttatc
atacagattttttcactttccttagttagagtcacgccaagggtatttta
ttatttatttgttgactattgagaagggtgttgtttccctaatttctttc
ctcagcctggtttatcctttgtgtacagaaaggccattgacttgtttgaa
gttaatttttattatccagcctactttcattgaagcctgtttatcaagct
tagaaggttctctgggtgacttttaaggttcacatatatatactatctat
catattgccaaaaggaatttgacctctccctcattggcatcctgattctc
cctcatgtgtggttcataatgcctc
gaattcagttgtttccctccaaaactatgttgtgactctataatttttcg
tgatgttttggctataatttttgtgaagccatgatttcattttgatgata
ttgtggtaatatatttgatggtattacaactatatttttgatgaatgtta
tagctatatttttgatgatgttttggctatattttgggtgatctttcttc
tgttcctggtgtctgcctttaaatggctggttaagcctccctctatactt
tgtcaaggtgttcagaccctgagtagccaagccaccaatactccatatct
tttgttgccttccctgactctcctccttttctttcttccttttccttcct
tttctgtctcttcccttgtttctcctatcagcccaataggtttgtcttgg
tgtttttaaggtcagtcagggcacaatctctttccactcagataattatg
ttggtctttagcccaaagtcatagtgaagaatagagttctaaggaagcta
acattccttattcaagattattaaatgaagatcaggaacagaattccaaa
aatctgaattaaccattacaccctacattgtgtccttatttgggaacact
ggggttcaaagtttatattagacaaagatctgactacaacatttagatga
aatggcatcaccagttctatggaaggctttcgactgcattttccatacca
catcttcaacatgatgtaggagcatgtccttcatgggaaaaaaaaaaaaa
aacaactggcatcacctccactcatccccttcatttatagctgtagaatc
aactcatattagaggaagggatacttaggaaaaaaagttgccaacagctt
ggaatgaagaagaggtatttaggagagactccatgtctgtgaacctattg
atttctgttcttcttgagtcccatgagcattctgggtagttacaggtgag
gatgaaagagctaggtgagatggccttgtaagatgtcacagagtagaaca
gagagtgcctccaccatatgggccttacttaggatcgtaccgcctgaaat
tttcagaggccatggtgtcctatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_126329270_126330338
seq2: B6Ng01-259F14.g_67_1140 (reverse)

seq1  GATAGGGAACAACCATGGCCTCTGAAAA-TTCAG--CGTACGATCCTAAG  47
      ||||||  || ||||||||||||||||| |||||   |||||||||||||
seq2  GATAGG--AC-ACCATGGCCTCTGAAAATTTCAGGCGGTACGATCCTAAG  47

seq1  TAAGG-CCATATGTTGGAGGCACTCTTCTG-TCTACTCTGTGACATCTTA  95
      ||||| ||||||| ||||||||||| |||| |||||||||||||||||||
seq2  TAAGGCCCATATGGTGGAGGCACTC-TCTGTTCTACTCTGTGACATCTTA  96

seq1  CAA-GCCATCTCACCTAGCTCCTTCATCCTCACCTGTAACTACCCAG-AT  143
      ||| ||||||||||||||||| ||||||||||||||||||||||||| ||
seq2  CAAGGCCATCTCACCTAGCTCTTTCATCCTCACCTGTAACTACCCAGAAT  146

seq1  GCTCATGGGACTCAAGAAGAACAGAAATCAATAGGTTCACAGACATGGAG  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATGGGACTCAAGAAGAACAGAAATCAATAGGTTCACAGACATGGAG  196

seq1  TCTCT-CTAAATACCTCTTCTTCATTCCAAGCTGTTGGCAACTTTTTTTC  242
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTAAATACCTCTTCTTCATTCCAAGCTGTTGGCAACTTTTTTTC  246

seq1  CTAAGTATCCCTTCCTCTAATATGAGTTGATTCTACAGCTATAAATGAAG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTATCCCTTCCTCTAATATGAGTTGATTCTACAGCTATAAATGAAG  296

seq1  GGGATGAGTGGAGGTGATGCCAGTTG-TTTTTTTTTTTTTTCCCATGAAG  341
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GGGATGAGTGGAGGTGATGCCAGTTGTTTTTTTTTTTTTTTCCCATGAAG  346

seq1  GACATGCTCCTACATCATGTTGAAGATGTGGTATGGAAAATGCAGTCGAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGCTCCTACATCATGTTGAAGATGTGGTATGGAAAATGCAGTCGAA  396

seq1  AGCCTTCCATAGAACTGGTGATGCCATTTCATCTAAATGTTGTAGTCAGA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCCATAGAACTGGTGATGCCATTTCATCTAAATGTTGTAGTCAGA  446

seq1  TCTTTGTCTAATATAAACTTTGAACCCCAGTGTTCCCAAATAAGGACACA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTCTAATATAAACTTTGAACCCCAGTGTTCCCAAATAAGGACACA  496

seq1  ATGTAGGGTGTAATGGTTAATTCAGATTTTTGGAATTCTGTTCCTGATCT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGGGTGTAATGGTTAATTCAGATTTTTGGAATTCTGTTCCTGATCT  546

seq1  TCATTTAATAATCTTGAATAAGGAATGTTAGCTTCCTTAGAACTCTATTC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAATAATCTTGAATAAGGAATGTTAGCTTCCTTAGAACTCTATTC  596

seq1  TTCACTATGACTTTGGGCTAAAGACCAACATAATTATCTGAGTGGAAAGA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTATGACTTTGGGCTAAAGACCAACATAATTATCTGAGTGGAAAGA  646

seq1  GATTGTGCCCTGACTGACCTTAAAAACACCAAGACAAACCTATTGGGCTG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTGCCCTGACTGACCTTAAAAACACCAAGACAAACCTATTGGGCTG  696

seq1  ATAGGAGAAACAAGGGAAGAGACAGAAAAGGAAGGAAAAGGAAGAAAGAA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGAAACAAGGGAAGAGACAGAAAAGGAAGGAAAAGGAAGAAAGAA  746

seq1  AAGGAGGAGAGTCAGGGAAGGCAACAAAAGATATGGAGTATTGGTGGCTT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGAGAGTCAGGGAAGGCAACAAAAGATATGGAGTATTGGTGGCTT  796

seq1  GGCTACTCAGGGTCTGAACACCTTGACAAAGTATAGAGGGAGGCTTAACC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACTCAGGGTCTGAACACCTTGACAAAGTATAGAGGGAGGCTTAACC  846

seq1  AGCCATTTAAAGGCAGACACCAGGAACAGAAGAAAGATCACCCAAAATAT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTTAAAGGCAGACACCAGGAACAGAAGAAAGATCACCCAAAATAT  896

seq1  AGCCAAAACATCATCAAAAATATAGCTATAACATTCATCAAAAATATAGT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAAACATCATCAAAAATATAGCTATAACATTCATCAAAAATATAGT  946

seq1  TGTAATACCATCAAATATATTACCACAATATCATCAAAATGAAATCATGG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATACCATCAAATATATTACCACAATATCATCAAAATGAAATCATGG  996

seq1  CTTCACAAAAATTATAGCCAAAACATCACGAAAAATTATAGAGTCACAAC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACAAAAATTATAGCCAAAACATCACGAAAAATTATAGAGTCACAAC  1046

seq1  ATAGTTTTGGAGGGAAACAACTGAATTC  1069
      ||||||||||||||||||||||||||||
seq2  ATAGTTTTGGAGGGAAACAACTGAATTC  1074