BAC Information

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BAC

Clone NameB6Ng01-259M05
Chromosome6 (Build37)
Map Location 95,619,854 - 95,621,002
singlet/doubletsinglet
Overlap geneSuclg2
Upstream geneLrig1, LOC625941, EG665865, LOC100043276, LOC100043680, Kbtbd8, LOC435912
Downstream geneLOC665886, LOC545867, C630007B19Rik, LOC100043685, 1700123L14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259M05.bB6Ng01-259M05.g
ACCGA064861GA064862
length1,1461,188
definitionB6Ng01-259M05.b B6Ng01-259M05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatcacctgagaggctaaggtggacgggccttaggactgaagcc
aactttgtctacataatgaagcgtgcctcgaaatcacatttagttatatt
tctgaaacacttaatttcatttgtaaaaaggaaaacaatctatatttttt
ccctggaaagtctatttttatgattatactactatagcatgcacctgaga
tacacataagatatgcctgtgtattgttcttcataataaagtggagtact
gaaaatgatccaaatgccatcaaatagaagagtggctgccaaagtcatga
catgatcaaatagcagctggtcccaactcacaatggcttcacctaactct
gtcaactgtataatggagggaacacgcctccaccacaacccccaactatt
ctaatttcccccttctatgtagcattccacaaactaaatgagctactcgg
tacattattatgaaatgagctttgtgtaggccaatctacccaactgtaag
atgatcaatattataagggtgctcatggtgcgcttccctaggcaagggat
tttggctcacgtgtggtcatcatgggtacagttgtgtgtgctttgtggag
atctgcgtgacactgttcgggaacagtccacctcgttcgggagctccgct
gaactggcctaaactcaccaacacatataggtgagctggcagggctctgc
tgtcactacctccctatcacgaggctcacaagtgggccccgccacaccca
cgttttttttcatgggttctgaggaccagactcagttctcaagcttgtgt
gttaagaacctgatgttttcaatgtattataggtccagtggtacaacatg
ccattacaagagaggaaacacccgttcaggaaccatataaaccatcagtg
acctcacaggaccaccagtattcacatgttcccctgcatgtatcaagtat
gccaacactttcaaaaccatgcatggcactccagaactctttgttgctta
tagtaactcagagccagaagtggagatgataaaacaaaagacaaaagtcg
cctggatcgagctactctagaagaacagcagttcttatggccactttgcc
taaaatcagacaatagaagtagttctttgatataattccactactg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgttcaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaaatggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcttgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacctatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaagagctaaagggatcttcaacccta
tagtggaacaacatatgaactaaccagtacccctgagctctgactctagc
tgcatatgtatcaaagatgcctagttcgcatcacttgtaaagagaggccc
aatgacacgcagactttgttgtgccctgtcaatgaacgcaaggcctaggg
ggaatgggtgtggatatcgctgcatcgctactgtgcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_95619854_95621002
seq2: B6Ng01-259M05.b_49_1194

seq1  GAATTCTATCACCTGAGAGGCTAAGGTGGACGGGCCTTAGGACTGAAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCACCTGAGAGGCTAAGGTGGACGGGCCTTAGGACTGAAGCC  50

seq1  AACTTTGTCTACATAATGAAGCGTGCCTCGAAATCACATTTAGTTATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGTCTACATAATGAAGCGTGCCTCGAAATCACATTTAGTTATATT  100

seq1  TCTGAAACACTTAATTTCATTTGTAAAAAGGAAAACAATCTATATTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAACACTTAATTTCATTTGTAAAAAGGAAAACAATCTATATTTTTT  150

seq1  CCCTGGAAAGTCTATTTTTATGATTATACTACTATAGCATGCACCTGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGAAAGTCTATTTTTATGATTATACTACTATAGCATGCACCTGAGA  200

seq1  TACACATAAGATATGCCTGTGTATTGTTCTTCATAATAAAGTGGAGTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATAAGATATGCCTGTGTATTGTTCTTCATAATAAAGTGGAGTACT  250

seq1  GAAAATGATCCAAATGCCATCAAATAGAAGAGTGGCTGCCAAAGTCATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGATCCAAATGCCATCAAATAGAAGAGTGGCTGCCAAAGTCATGA  300

seq1  CATGATCAAATAGCAGCTGGTCCCAACTCACAATGGCTTCACCTAACTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATCAAATAGCAGCTGGTCCCAACTCACAATGGCTTCACCTAACTCT  350

seq1  GTCAACTGTATAATGGAGGGAACACGCCTCCACCACAACCCCCAACTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACTGTATAATGGAGGGAACACGCCTCCACCACAACCCCCAACTATT  400

seq1  CTAATTTCCCCCTTCTATGTAGCATTCCACAAACTAAATGAGCTACTCGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTCCCCCTTCTATGTAGCATTCCACAAACTAAATGAGCTACTCGG  450

seq1  TACATTATTATGAAATGAGCTTTGTGTAGGCCAATCTACCCAACTGTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTATTATGAAATGAGCTTTGTGTAGGCCAATCTACCCAACTGTAAG  500

seq1  ATGATCAATATTATAAGGGTGCTCATGGTGCGCTTCCCTAGGCAAGGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCAATATTATAAGGGTGCTCATGGTGCGCTTCCCTAGGCAAGGGAT  550

seq1  TTTGGCTCACGTGTGGTCATCATGGGTACAGTTGTGTGTGCTTTGTGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTCACGTGTGGTCATCATGGGTACAGTTGTGTGTGCTTTGTGGAG  600

seq1  ATCTGCGTGACACTGTTCGGGAACAGTCCACCTCGTTCGGGAGCTCCGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCGTGACACTGTTCGGGAACAGTCCACCTCGTTCGGGAGCTCCGCT  650

seq1  GAACTGGCCTAAACTCACCAACACATATAGGTGAGCTGGCAGGGCTCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGCCTAAACTCACCAACACATATAGGTGAGCTGGCAGGGCTCTGC  700

seq1  TGTCACTACCTCCCTATCACGAGGCTCACAAGTGGGCCCCGCCACACCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTACCTCCCTATCACGAGGCTCACAAGTGGGCCCCGCCACACCCA  750

seq1  CGTTTTTTTTCATGGGTTCTGAGGACCAGACTCAGGTTCTCAAGCTTGTG  800
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CGTTTTTTTTCATGGGTTCTGAGGACCAGACTCA-GTTCTCAAGCTTGTG  799

seq1  TGTTAAGAACCTGATGTTTTCAATGTATTATAGGTCCAGTGGTACAACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGAACCTGATGTTTTCAATGTATTATAGGTCCAGTGGTACAACAT  849

seq1  GCCATTACAAGAGAGGAAACACCCGTTCAGGAACCATATAAACCATCAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTACAAGAGAGGAAACACCCGTTCAGGAACCATATAAACCATCAGT  899

seq1  GACCTCACAGGACCACCAGTATTCACATGTTCCCCTGCATGTATCAAGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCACAGGACCACCAGTATTCACATGTTCCCCTGCATGTATCAAGTA  949

seq1  TGCCAACACTTTCAAAACCATGCATGGCACTCCAGAACTCTTTGTTGCTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAACACTTTCAAAACCATGCATGGCACTCCAGAACTCTTTGTTGCTT  999

seq1  ATAGTAACTCAGAAGCCAGAAGTGGAGATGATAAAACAAAAGAACAAAAG  1050
      |||||||||||| ||||||||||||||||||||||||||||| |||||||
seq2  ATAGTAACTCAG-AGCCAGAAGTGGAGATGATAAAACAAAAG-ACAAAAG  1047

seq1  TCGCCTGGATCGAGCTACTCTAAGGAAG-ACAGCAGTCCTTAT-GCCACC  1098
      ||||||||||||||||||||||  |||| |||||||| ||||| ||||| 
seq2  TCGCCTGGATCGAGCTACTCTA--GAAGAACAGCAGTTCTTATGGCCACT  1095

seq1  TTGCCTAAAAATCAGACAATAAGAAGTAAGTCTTTGATATA--TCAACTA  1146
      |||||| ||||||||||||| |||||||  |||||||||||  || ||||
seq2  TTGCCT-AAAATCAGACAAT-AGAAGTAGTTCTTTGATATAATTCCACTA  1143

seq1  CTG  1149
      |||
seq2  CTG  1146