BAC Information

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BAC

Clone NameB6Ng01-260E05
Chromosome6 (Build37)
Map Location 10,519,889 - 10,521,113
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC330264
Downstream geneLOC100040285, LOC667650, AA545190
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260E05.bB6Ng01-260E05.g
ACCGA065228GA065229
length1,2261,208
definitionB6Ng01-260E05.b B6Ng01-260E05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaatctcattgccttcaagcattttctaggacattggaacactg
gtggatgcttacctatgtcagaattcaatcttaaaagtcacttataataa
aataatactaaaagagagcacgtggatccatacacaagactaatgcagga
atagggtatgagtatacaggttatgagaattccaaggttccaggaggttg
agtttccttgaaactctttgcctctcggcctgccaagcagaattcactgg
agtgtgcatagcattatgtgtatattattttaacatacatacgatttttt
gtcttcttttcaaacttaacttttaatactgtagttggggatggtaaatg
tgattaatgagagttagaaatgatagtatcccatattagggaaagacata
atcctgagcttcatgaacttattggagaaaattattccttagagaaatgt
atacaccactttcctcactcatatgtattgttaattcctttctaatccat
ttattatcagatctccaaaatggatttatatgcttaattaaacttctcag
acttttgaaggaagtcacaatgaataaaaaattctgactttgcttgaaga
ataaaaaaaaatcatcaaatttaaagcaagtgaaacaataagaatttaat
gtcaaagggcaaatggcaagtctgttgaaaaattattgagctatttatga
aactgaaaaatcccattcttcatattccattaattgacaccaatgtggtt
gtctgtgtctatctcaagtttctaagtccaccacaactaaagggctcaga
ataatcagtgatcagagaaagtcctcagagtatcttgttgatcaatagtt
aatcttcaatttctgaattccactgacaatcaccaaatagcacaatcact
ggttaagtagtggaaaatagtcagacttgtttttaaaaatggaaaaagta
agcaaccgctactaaatttaatatttttatcaattttgtagtactattat
ttttgctaccataaaaaagaagtataatttgaaaagttttgcatgattga
aaccacatcatcaggtgctttaatattcagaaaccacctattacttctta
tgtagtaatttgaaaatcattaaacacaagcaaactttagttatatgttt
gaaaagccatcactcctcactttaattctgaaatggattaagaaactccc
ggtttcttggcatctctttctgaacc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcttggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gattttggacatagtactaccggaggatccagcaatacctctcctgggca
tttatccagaagatgccccaactggtaagaaggacacatgctccactatg
ttcatagcagccttatgtataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaagaatgattttatgaaattcctagccaaa
tggatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
gaactcacacaatatgtactcactgataagtggatattagccccaaacct
aggattcccaagatataaggtacaatttgctaaacacatgaaactcaaga
agaatgaagactgaagtgtggacactatgcccctccttagatttgggaac
aaaacacccatggaaggaggtacagagacaaagtttggaaccgaggtgaa
aggatggaccatgtagagactgccatatccatggatccaccccataatca
gcatccaaacgctgacaccattgtataccctagcaagattttattgaaag
gacccagatgtagctatctcttgtgagactatgccggggcctagcaaaca
cagaaagtggatgctcacagtcagctaatggatggatcacagggctccca
tggaggagctagaagaaagaacccaagagctaaagggatctgcaacctat
aggtggaacaacattatgactaaccagtacccggagctcttgacgctagc
tgcatatgttatcaaagatgggcctagttgcatcactgaagagaggccaa
ttggaacacgcaaactttaatatgtccagtacaggtaacgccagccaaat
ggggattggctgggtatagggagatggctgtacaatataataggcaatat
tatgaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_10519889_10521113
seq2: B6Ng01-260E05.b_42_1267

seq1  GAATTCCAATCTCATTGCCTTCAAGCATTTTCTAGGACATTGGAACACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATCTCATTGCCTTCAAGCATTTTCTAGGACATTGGAACACTG  50

seq1  GTGGATGCTTACCTATGTCAGAATTCAATCTTAAAAGTCACTTATAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGCTTACCTATGTCAGAATTCAATCTTAAAAGTCACTTATAATAA  100

seq1  AATAATACTAAAAGAGAGCACGTGGATCCATACACAAGACTAATGCAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATACTAAAAGAGAGCACGTGGATCCATACACAAGACTAATGCAGGA  150

seq1  ATAGGGTATGAGTATACAGGTTATGAGAATTCCAAGGTTCCAGGAGGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGTATGAGTATACAGGTTATGAGAATTCCAAGGTTCCAGGAGGTTG  200

seq1  AGTTTCCTTGAAACTCTTTGCCTCTCGGCCTGCCAAGCAGAATTCACTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCTTGAAACTCTTTGCCTCTCGGCCTGCCAAGCAGAATTCACTGG  250

seq1  AGTGTGCATAGCATTATGTGTATATTATTTTAACATACATACGATTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGCATAGCATTATGTGTATATTATTTTAACATACATACGATTTTTT  300

seq1  GTCTTCTTTTCAAACTTAACTTTTAATACTGTAGTTGGGGATGGTAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTTTTCAAACTTAACTTTTAATACTGTAGTTGGGGATGGTAAATG  350

seq1  TGATTAATGAGAGTTAGAAATGATAGTATCCCATATTAGGGAAAGACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAATGAGAGTTAGAAATGATAGTATCCCATATTAGGGAAAGACATA  400

seq1  ATCCTGAGCTTCATGAACTTATTGGAGAAAATTATTCCTTAGAGAAATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGAGCTTCATGAACTTATTGGAGAAAATTATTCCTTAGAGAAATGT  450

seq1  ATACACCACTTTCCTCACTCATATGTATTGTTAATTCCTTTCTAATCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACCACTTTCCTCACTCATATGTATTGTTAATTCCTTTCTAATCCAT  500

seq1  TTATTATCAGATCTCCAAAATGGATTTATATGCTTAATTAAACTTCTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATCAGATCTCCAAAATGGATTTATATGCTTAATTAAACTTCTCAG  550

seq1  ACTTTTGAAGGAAGTCACAATGAATAAAAAATTCTGACTTTGCTTGAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGAAGGAAGTCACAATGAATAAAAAATTCTGACTTTGCTTGAAGA  600

seq1  ATAAAAAAAAATCATCAAATTTAAAGCAAGTGAAACAATAAGAATTTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAAAATCATCAAATTTAAAGCAAGTGAAACAATAAGAATTTAAT  650

seq1  GTCAAAGGGCAAATGGCAAGTCTGTTGAAAAATTATTGAGCTATTTATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGGGCAAATGGCAAGTCTGTTGAAAAATTATTGAGCTATTTATGA  700

seq1  AACTGAAAAATCCCATTCTTCATATTCCATTAATTGACACCAATGTGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAAAATCCCATTCTTCATATTCCATTAATTGACACCAATGTGGTT  750

seq1  GTCTGTGTCTATCTCAAGTTTCTAAGTCCACCACAACTAAAGGGCTCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGTCTATCTCAAGTTTCTAAGTCCACCACAACTAAAGGGCTCAGA  800

seq1  ATAATCAGTGATCAGAGAAAGTCCTCAGAGTATCTTGTTGATCAATAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCAGTGATCAGAGAAAGTCCTCAGAGTATCTTGTTGATCAATAGTT  850

seq1  AATCTTCAATTTCTGAAATTCCACTGACAATCACCAAATAGCACAATCAC  900
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AATCTTCAATTTCTG-AATTCCACTGACAATCACCAAATAGCACAATCAC  899

seq1  TGGTTAAGTAGTGGAAAATAGTCAGACTTGTTTTTAAAAATGGAAAAAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAAGTAGTGGAAAATAGTCAGACTTGTTTTTAAAAATGGAAAAAGT  949

seq1  AAGCAACCGCTACTAAATTTAATA-TTTTATCAATTTTGTAGTACTA-TA  998
      |||||||||||||||||||||||| |||||||||||||||||||||| ||
seq2  AAGCAACCGCTACTAAATTTAATATTTTTATCAATTTTGTAGTACTATTA  999

seq1  TTTTTGCTAACAATAAAAAAGAAGTAT-ATTTGAAAAGTTTTGCATGATT  1047
      |||||||| || ||||||||||||||| ||||||||||||||||||||||
seq2  TTTTTGCT-ACCATAAAAAAGAAGTATAATTTGAAAAGTTTTGCATGATT  1048

seq1  GAAA-CACATCATCAAGTGCTTAAATATTCAGAATCACCCTATTAC-TCT  1095
      |||| |||||||||| |||||| ||||||||||| |  |||||||| |||
seq2  GAAACCACATCATCAGGTGCTTTAATATTCAGAAACCACCTATTACTTCT  1098

seq1  TAGTGTAGTAAATTTGAAATATCATTAAACAAAAGCAAACTTTAG-TATA  1144
      || |||||| ||||||||| ||||||||||| ||||||||||||| ||||
seq2  TA-TGTAGT-AATTTGAAA-ATCATTAAACACAAGCAAACTTTAGTTATA  1145

seq1  TGTATGAAAAG-CATCAGCTCT-ACTTAAATTCTGAAGTGGATTAAAGAA  1192
      ||| ||||||| |||||   || |||| ||||||||| ||||||||  ||
seq2  TGTTTGAAAAGCCATCACTCCTCACTTTAATTCTGAAATGGATTAAGAAA  1195

seq1  CTCCGTGTTTCTTGCCATCATCTTTCCTGAACC  1225
      ||||  |||||||| |||| ||||| |||||||
seq2  CTCCCGGTTTCTTGGCATC-TCTTT-CTGAACC  1226