BAC Information

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BAC

Clone NameB6Ng01-260G16
Chromosome6 (Build37)
Map Location 19,592,018 - 19,593,076
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
Downstream geneLOC100040838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260G16.bB6Ng01-260G16.g
ACCGA065345GA065346
length1,057574
definitionB6Ng01-260G16.b B6Ng01-260G16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcaacttacatataatttgcagttaaagttcacactggaaatg
ctttaattgaaattttagggggtgatttggacattaaatggatgtacttt
tttaagatcaacgtactttgtctatccattcaggatttgttttatatctc
tattctgagtatatccagtgttgcaaggaaggtggttttcaaatgccttt
gtttctttttcagactgctgctgtctgattaatggattttataaatagta
taaacttatcaagggtttcagcttacacctagatgctacaaccatatttg
cggaccactaactccaagagtaacattcagataggccaccctttctcaga
aagctaatagttgccaggaacacttttctactttgttgatgttgaatcaa
aaatataagtaatctttatagcctaaaggctttatttagttagtttattc
acaatttgaaaccagactttgtagatgacttatataagaatctaagaaga
gaagcatcacaaacaatttgcaagctctctcttcaaggttctttgattaa
taagaaacatcataaactatcatacataaatctgtacatatgaatcttta
aagtcttggctgaacaaataatgctaaaatcttatatttattctaactct
gatttcatttgttagacccaattcccttttgttgctatgtcaatgtgcag
catctttatcaaaagtgttctctctaaatgtataatatagtcttaagact
ccaatggaggtcttaggggaaggactgaaggagcttaaggggtttgaaac
ctctaaggaagaacaataatatcaatcaaccagagtcccccaggactctc
aggtactaaaccaccaaccaaagagtacacatgaagagaccaatggctcc
agctaaatgtgtagtagaggatttccttatctggtgtcaacaggagggaa
ggcctttggtcctgtgagactcaatgacccagtatcaggaatgctagggc
tgtgctgtgggagtgagtgggggtagggagacctttatagaagaggggag
cagatgg

gtccttgtcatatagatctttcaataccttagttagagtcacagcaaggt
attttgtattttttgtgactattgtgaagggtgttgtttccctaatttct
ttctcatcctgcggaactaaagcgaaaggatggaccatccatagactacc
ccactctgggatccatcccaaaatcagccaccaaacacacactattgcat
acaccagcaagattttgctgaaaggaccctgataatgctgtatcgtggga
ggctatggcagtgcctgacaaatacagaagtggatgctcactggcactta
ttggatggaacatagggcccctaatggaggaaataaagtacctaaggagc
tgaaggggtctgtaaccctataggtggtacaacaatatgagctaaccact
acccctagatctcgtatctctagctgcatatgtagcagaagatggcctag
ttggccattattgggatgagaggcctcttggtcttacaaactttatatgc
ccccgtacaggagaatgccagggtcaagaaataggagtgggtgtgtaggg
agcaggtcaggaaagggggttatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19592018_19593076
seq2: B6Ng01-260G16.b_43_1099 (reverse)

seq1  CCATCTGCTCCCCTTCTTCTATAAAGGTCCTCCCTA--CCCACTCACTCC  48
      ||||||||||||| |||||||||||||| |||||||  ||||||||||||
seq2  CCATCTGCTCCCC-TCTTCTATAAAGGT-CTCCCTACCCCCACTCACTCC  48

seq1  CACAGCACAGCCCTAGCATTCCCTGATACTGGGTCATTGAGTCTCCACAG  98
      |||||||||||||||||||| ||||||||||||||||||||||| |||||
seq2  CACAGCACAGCCCTAGCATT-CCTGATACTGGGTCATTGAGTCT-CACAG  96

seq1  GACCAAAGGCCTTCCCTCCTGTTGACACCAGATAAGGAAATCCTCTACTA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAAGGCCTTCCCTCCTGTTGACACCAGATAAGGAAATCCTCTACTA  146

seq1  CACATTTAGCTGGAGCCATTGGTCTCTTCATGTGTACTCTTTGGTTGGTG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTAGCTGGAGCCATTGGTCTCTTCATGTGTACTCTTTGGTTGGTG  196

seq1  GTTTAGTACCTGAGAGTCCTGGGGGACTCTGGTTGATTGATATTATTGTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGTACCTGAGAGTCCTGGGGGACTCTGGTTGATTGATATTATTGTT  246

seq1  CTTCCTTAGAGGTTTCAAACCCCTTAAGCTCCTTCAGTCCTTCCCCTAAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTAGAGGTTTCAAACCCCTTAAGCTCCTTCAGTCCTTCCCCTAAG  296

seq1  ACCTCCATTGGAGTCTTAAGACTATATTATACATTTAGAGAGAACACTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCATTGGAGTCTTAAGACTATATTATACATTTAGAGAGAACACTTT  346

seq1  TGATAAAGATGCTGCACATTGACATAGCAACAAAAGGGAATTGGGTCTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAAGATGCTGCACATTGACATAGCAACAAAAGGGAATTGGGTCTAA  396

seq1  CAAATGAAATCAGAGTTAGAATAAATATAAGATTTTAGCATTATTTGTTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAAATCAGAGTTAGAATAAATATAAGATTTTAGCATTATTTGTTC  446

seq1  AGCCAAGACTTTAAAGATTCATATGTACAGATTTATGTATGATAGTTTAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGACTTTAAAGATTCATATGTACAGATTTATGTATGATAGTTTAT  496

seq1  GATGTTTCTTATTAATCAAAGAACCTTGAAGAGAGAGCTTGCAAATTGTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTCTTATTAATCAAAGAACCTTGAAGAGAGAGCTTGCAAATTGTT  546

seq1  TGTGATGCTTCTCTTCTTAGATTCTTATATAAGTCATCTACAAAGTCTGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGCTTCTCTTCTTAGATTCTTATATAAGTCATCTACAAAGTCTGG  596

seq1  TTTCAAATTGTGAATAAACTAACTAAATAAAGCCTTTAGGCTATAAAGAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATTGTGAATAAACTAACTAAATAAAGCCTTTAGGCTATAAAGAT  646

seq1  TACTTATATTTTTGATTCAACATCAACAAAGTAGAAAAGTGTTCCTGGCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATATTTTTGATTCAACATCAACAAAGTAGAAAAGTGTTCCTGGCA  696

seq1  ACTATTAGCTTTCTGAGAAAGGGTGGCCTATCTGAATGTTACTCTTGGAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTAGCTTTCTGAGAAAGGGTGGCCTATCTGAATGTTACTCTTGGAG  746

seq1  TTAGTGGTCCGCAAATATGGTTGTAGCATCTAGGTGTAAGCTGAAACCCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGGTCCGCAAATATGGTTGTAGCATCTAGGTGTAAGCTGAAACCCT  796

seq1  TGATAAGTTTATACTATTTATAAAATCCATTAATCAGACAGCAGCAGTCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGTTTATACTATTTATAAAATCCATTAATCAGACAGCAGCAGTCT  846

seq1  GAAAAAGAAACAAAGGCATTTGAAAACCACCTTCCTTGCAACACTGGATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGAAACAAAGGCATTTGAAAACCACCTTCCTTGCAACACTGGATA  896

seq1  TACTCAGAATAGAGATATAAAACAAATCCTGAATGGATAGACAAAGTACG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGAATAGAGATATAAAACAAATCCTGAATGGATAGACAAAGTACG  946

seq1  TTGATCTTAAAAAAGTACATCCATTTAATGTCCAAATCACCCCCTAAAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTTAAAAAAGTACATCCATTTAATGTCCAAATCACCCCCTAAAAT  996

seq1  TTCAATTAAAGCATTTCCAGTGTGAACTTTAACTGCAAATTATATGTAAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTAAAGCATTTCCAGTGTGAACTTTAACTGCAAATTATATGTAAG  1046

seq1  TTGCTGAATTC  1059
      |||||||||||
seq2  TTGCTGAATTC  1057


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