BAC Information

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BAC

Clone NameB6Ng01-260I18
Chromosome6 (Build37)
Map Location 44,307,320 - 44,308,468
singlet/doubletsinglet
Overlap genenone
Upstream geneTpk1, LOC665747, LOC546897, LOC665779
Downstream geneLOC100040210, Cntnap2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260I18.bB6Ng01-260I18.g
ACCGA065440GA065441
length1,135781
definitionB6Ng01-260I18.b B6Ng01-260I18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaagagttaagcaaagtactcatggtgaaggcaaaggggcctca
caaaggggcacttggaacaagtatatactttagtattgtttgaaaactca
catgattgagccttaagtaaatcagcaccatgtggacagtgaattgtagt
gtgcactgtccaggaaaccatgaagtctcaaatttgaattggtacttcag
tccactgttgccatgctcttctgaaaatcaacccgggctttcatcagagc
atatttcccttatgatagtgtgcaaattattcttatctatactttttcaa
atccactggattgtatgagaccaaatatcttagtacatgaagtgacaaag
ggtcctataacaggaaactgcagaggcagctgaggaaacagagccaatct
gtatctccatacagaattagcatgcacaccttacacaataactgtgcatg
taatagttgcataaatgaaatacaaatgtgaaaacaactgcatgaacctg
aactgtacagatgacatataatattttggaataaaaacaaacatctaggt
ctacagaatcagagaaatattactattatagtatagcagtagatataaaa
gcaggaagtaaaaacttttgcaagaaaaataaaattcaaacagttgtaca
ttttgacctctaatctaggctggtatatcaaattgcttttttttagtatt
ttccatatctaactatagttaggtccctatattgctgccactgatgacaa
acttctcataactacatggagctactttctggaattgtaatattttaagg
cactgatcgtttgtgcctaaaactctaagcacaacagtgtctctgcaaat
ggcaggcattctgatccttttaattctcaagatgtcctaaccacttctgt
tggtatgcttctaaactaccattctgttctaacccctttcttctaatcga
ttaaggatatagcaattctgataaaaaaaaaaagtaccatctacttagga
tcagaagatctatttctgcttatttctttatttcaccatgtcattccaga
aatctgtgtttctgtcacatactgagttatgtatatctagctcatgtact
gttcttttctttctttttacttgtatgtttttatg

gaattctttgtttagctctgtaccccatttttaatgtggttatttgaatt
tctggagtccagcttcttgagctctttgtatatattggacattagtcccc
tttcagatttaggataggtaaaaatcctttcccaatctcttggtggcctc
tttgtcttattgacagtatcctttgccttagaatacccaagatacattat
gcaaagtacaaaaaatcaagaagatggaagaccaacgtgtggatacttca
ttcctccttagaaaagggaacaaaatacccatggaaggagttacaaagac
aaaatttggaggtaagatgaaaggatggaccatccagagactaccccacc
cagggatccatccgataatcagccaccaaaactagacactattgcacatg
ccagcaagattttgctgaaaggaccctaatatagctgtctcttgtgaggc
tatgccagtgcctggtaaatatagaagtggatgctcatagtcatctattg
gatggaatacagggcccctaacggaggagctagagaaagtatccaagaaa
ctgaagaggtatgcatccctataggtggaacaacaatatgaactaaccag
tacccacaaagctcatgtctctaactgcatatgtagcagaagatggccta
gtcggctatcattgggaagagttgcccctttgtcttgcaaaatttatatg
ccccagtaccagggaatgccagggccaagaagtaggagtgggtgggtagg
agttgcaaggcaggggaagggtataggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_44307320_44308468
seq2: B6Ng01-260I18.b_43_1177

seq1  GAATTCAAAGAGTTAAGCAAAGTACTCATGGTGAAGGCAAAGGGGCCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGAGTTAAGCAAAGTACTCATGGTGAAGGCAAAGGGGCCTCA  50

seq1  CAAAGGGGCACTTGGAACAAGTATATACTTTAGTATTGTTTGAAAACTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGGCACTTGGAACAAGTATATACTTTAGTATTGTTTGAAAACTCA  100

seq1  CATGATTGAGCCTTAAGTAAATCAGCACCATGTGGACAGTGAATTGTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTGAGCCTTAAGTAAATCAGCACCATGTGGACAGTGAATTGTAGT  150

seq1  GTGCACTGTCCAGGAAACCATGAAGTCTCAAATTTGAATTGGTACTTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACTGTCCAGGAAACCATGAAGTCTCAAATTTGAATTGGTACTTCAG  200

seq1  TCCACTGTTGCCATGCTCTTCTGAAAATCAACCCGGGCTTTCATCAGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGTTGCCATGCTCTTCTGAAAATCAACCCGGGCTTTCATCAGAGC  250

seq1  ATATTTCCCTTATGATAGTGTGCAAATTATTCTTATCTATACTTTTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCCCTTATGATAGTGTGCAAATTATTCTTATCTATACTTTTTCAA  300

seq1  ATCCACTGGATTGTATGAGACCAAATATCTTAGTACATGAAGTGACAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTGGATTGTATGAGACCAAATATCTTAGTACATGAAGTGACAAAG  350

seq1  GGTCCTATAACAGGAAACTGCAGAGGCAGCTGAGGAAACAGAGCCAATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTATAACAGGAAACTGCAGAGGCAGCTGAGGAAACAGAGCCAATCT  400

seq1  GTATCTCCATACAGAATTAGCATGCACACCTTACACAATAACTGTGCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTCCATACAGAATTAGCATGCACACCTTACACAATAACTGTGCATG  450

seq1  TAATAGTTGCATAAATGAAATACAAATGTGAAAACAACTGCATGAACCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTTGCATAAATGAAATACAAATGTGAAAACAACTGCATGAACCTG  500

seq1  AACTGTACAGATGACATATAATATTTTGGAATAAAAACAAACATCTAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTACAGATGACATATAATATTTTGGAATAAAAACAAACATCTAGGT  550

seq1  CTACAGAATCAGAGAAATATTACTATTATAGTATAGCAGTAGATATAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGAATCAGAGAAATATTACTATTATAGTATAGCAGTAGATATAAAA  600

seq1  GCAGGAAGTAAAAACTTTTGCAAGAAAAATAAAATTCAAACAGTTGTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAGTAAAAACTTTTGCAAGAAAAATAAAATTCAAACAGTTGTACA  650

seq1  TTTTGACCTCTAATCTAGGCTGGTATATCAAATTGCTTTTTTTTAGTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACCTCTAATCTAGGCTGGTATATCAAATTGCTTTTTTTTAGTATT  700

seq1  TTCCATATCTAACTATAGTTAGGTCCCTATATTGCTGCCACTGATGACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATATCTAACTATAGTTAGGTCCCTATATTGCTGCCACTGATGACAA  750

seq1  ACTTCTCATAACTACATGGAGCTACTTTCTGGAATTGTAATATTTTAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCATAACTACATGGAGCTACTTTCTGGAATTGTAATATTTTAAGG  800

seq1  CACTGATCGTTTGTGCCTAAAACTCTAAGCACAACAGTGTCTCTGCAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGATCGTTTGTGCCTAAAACTCTAAGCACAACAGTGTCTCTGCAAAT  850

seq1  GGCAGGCATTCTGATCCTTTTAATTCTCAAGATGTCCTAACCACTTCTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCATTCTGATCCTTTTAATTCTCAAGATGTCCTAACCACTTCTGT  900

seq1  TGGTATGCTTCTAAACTACCATTCTGTTCTAACCCCTTTCTTCTAATCGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATGCTTCTAAACTACCATTCTGTTCTAACCCCTTTCTTCTAATCGA  950

seq1  TTAAGGATATAGCAATTCTGATAAAAAAAAAAAGTACCATCTACTTAGGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGATATAGCAATTCTGATAAAAAAAAAAAGTACCATCTACTTAGGA  1000

seq1  TCAGAAGATCTATTTCTGCTTATTTCTTTAATTTCAACCATTGTCATTCC  1050
      ||||||||||||||||||||||||||||| ||||| |||| |||||||||
seq2  TCAGAAGATCTATTTCTGCTTATTTCTTT-ATTTC-ACCA-TGTCATTCC  1047

seq1  AGAAATCTGTGTTTCTGTCAACCATACTGAGTTATGTATAATCCTAAGCT  1100
      ||||||||||||||||||||  ||||||||||||||||| |||   ||| 
seq2  AGAAATCTGTGTTTCTGTCA--CATACTGAGTTATGTAT-ATC--TAGC-  1091

seq1  TCATGTAACTGTTTCTTTTTCTTTTCTTTTTTACTTGTATGTTTTTATG  1149
      |||||| ||||||   ||||||||   ||||||||||||||||||||||
seq2  TCATGT-ACTGTT--CTTTTCTTT--CTTTTTACTTGTATGTTTTTATG  1135


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