BAC Information

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BAC

Clone NameB6Ng01-261A08
Chromosome6 (Build37)
Map Location 78,345,097 - 78,345,871
singlet/doubletsinglet
Overlap genenone
Upstream geneCtnna2, LOC668169, EG434050, Pap, Reg3d, Reg3a
Downstream geneReg2, Reg1, Reg3g, LOC621716, Ppia-ps6_789.1, LOC384440
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261A08.bB6Ng01-261A08.g
ACCGA065794GA065795
length1,081851
definitionB6Ng01-261A08.b B6Ng01-261A08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtgtagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtgggacactatgcctctccttagaagtggga
acaaaatcacccatggaaggagttacagagacaaagtttggagctgagat
gaaaggatggaccatgtagagactgccatatccagggatccaccccatta
atcagcatccaaacgcttgacaccatttgcatacactagcaagattttat
tgaaaggacccagatgtagctgtctcttgtgagactatgccggggcttat
caaacacagaagtggatgctcacagtccagcttattgatggatcacaggg
ctcccattgggaggagctagagaaagtacccgaggagctaaagggaatct
ccatccctttaggtggaacaaccatttattgtacttatccggtcccccga
gacctctctgaacttcctagccggcgctatg
gaattccaaaaagtctcaatcagatagaatgaacattccttgagtatgga
cagaacctacaaaaactatagaatagaaactctcaatgatgctgtatcct
acagaaaatgaaattctggaagacgaaatggtcaccagtattcaactgac
attgatttcatgaaaatggagatgttgggtgactttgggatgaatccatt
cttgttatgagatctttttaaaagtagatctcctctggttggcagtgtga
ggaagcatactttcaaaagagcaaaagaaaacattgtctcagaagatgga
aagagatcttggtccgggacccgccgaacttaggaaattagtctgaacag
gtgagagggtgcgccagagaacctgacagcttctggaacaggcggaagca
cagaggcactgaggcagcaccctttgtgggccggggacagccagccaccg
tctggaccggaggacaggtgcccgcccggctggggaggcggcctaagcca
cagcagcagcggtcgccatcttggtccaagacccgccgaacttaggaaat
tagtctgaacaggtgagagggtgcgccagagaacctgacagcttctggaa
caggcggaagcacagaggcactgaggcagcaccctttgtgggccggggac
agccagccaccgtctggaccggaggacaggtgcccgcccggctggggagg
cggcctaagccacagcagcagcggtcgccatcttggtccgggacccgccg
aacttaggaaattagtctgaacaggtgagagggtgcgccagagaacctga
cagcctctggaacaggcagaagcacagaggggctgaggcagcaccctgtg
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_78345097_78345871
seq2: B6Ng01-261A08.g_66_840

seq1  GAATTCCAAAAAGTCTCAATCAGATAGAATGAACATTCCTTGAGTATGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAAAGTCTCAATCAGATAGAATGAACATTCCTTGAGTATGGA  50

seq1  CAGAACCTACAAAAACTATAGAATAGAAACTCTCAATGATGCTGTATCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCTACAAAAACTATAGAATAGAAACTCTCAATGATGCTGTATCCT  100

seq1  ACAGAAAATGAAATTCTGGAAGACGAAATGGTCACCAGTATTCAACTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAATGAAATTCTGGAAGACGAAATGGTCACCAGTATTCAACTGAC  150

seq1  ATTGATTTCATGAAAATGGAGATGTTGGGTGACTTTGGGATGAATCCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTTCATGAAAATGGAGATGTTGGGTGACTTTGGGATGAATCCATT  200

seq1  CTTGTTATGAGATCTTTTTAAAAGTAGATCTCCTCTGGTTGGCAGTGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTATGAGATCTTTTTAAAAGTAGATCTCCTCTGGTTGGCAGTGTGA  250

seq1  GGAAGCATACTTTCAAAAGAGCAAAAGAAAACATTGTCTCAGAAGATGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCATACTTTCAAAAGAGCAAAAGAAAACATTGTCTCAGAAGATGGA  300

seq1  AAGAGATCTTGGTCCGGGACCCGCCGAACTTAGGAAATTAGTCTGAACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATCTTGGTCCGGGACCCGCCGAACTTAGGAAATTAGTCTGAACAG  350

seq1  GTGAGAGGGTGCGCCAGAGAACCTGACAGCTTCTGGAACAGGCGGAAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGGGTGCGCCAGAGAACCTGACAGCTTCTGGAACAGGCGGAAGCA  400

seq1  CAGAGGCACTGAGGCAGCACCCTTTGTGGGCCGGGGACAGCCAGCCACCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCACTGAGGCAGCACCCTTTGTGGGCCGGGGACAGCCAGCCACCG  450

seq1  TCTGGACCGGAGGACAGGTGCCCGCCCGGCTGGGGAGGCGGCCTAAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGACCGGAGGACAGGTGCCCGCCCGGCTGGGGAGGCGGCCTAAGCCA  500

seq1  CAGCAGCAGCGGTCGCCATCTTGGTCCAAGACCCGCCGAACTTAGGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCAGCGGTCGCCATCTTGGTCCAAGACCCGCCGAACTTAGGAAAT  550

seq1  TAGTCTGAACAGGTGAGAGGGTGCGCCAGAGAACCTGACAGCTTCTGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTGAACAGGTGAGAGGGTGCGCCAGAGAACCTGACAGCTTCTGGAA  600

seq1  CAGGCGGAAGCACAGAGGCACTGAGGCAGCACCCTTTGTGGGCCGGGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCGGAAGCACAGAGGCACTGAGGCAGCACCCTTTGTGGGCCGGGGAC  650

seq1  AGCCAGCCACCGTCTGGACCGGAGGACAGGTGCCCGCCCGGCTGGGGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCCACCGTCTGGACCGGAGGACAGGTGCCCGCCCGGCTGGGGAGG  700

seq1  CGGCCTAAGCCACAGCAGCAGCGGTCGCCATCTTGGTCCGGGACCCGCCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCTAAGCCACAGCAGCAGCGGTCGCCATCTTGGTCCGGGACCCGCCG  750

seq1  AACTTAGGAAATTAGTCTGAACAGG  775
      |||||||||||||||||||||||||
seq2  AACTTAGGAAATTAGTCTGAACAGG  775