BAC Information

Click to search

BAC

Clone NameB6Ng01-261G14
Chromosome6 (Build37)
Map Location 128,406,769 - 128,529,794
singlet/doubletdoublet
Overlap geneEG667598, Pzp, LOC384494, EG667610, BC048546
Upstream geneParp11, Efcab4b, Prmt8, Tspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4
Downstream geneKlrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261G14.bB6Ng01-261G14.g
ACCGA066088GA066089
length1,114795
definitionB6Ng01-261G14.b B6Ng01-261G14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,528,702 - 128,529,794)(128,406,769 - 128,407,562)
sequence
gaattcaaagcctcttgcttcaaagcttagctctgttgaccagtgattga
ctcttggcaagtaaattctggtccttgagatataatttcttcatctgtaa
aatgaaagggctagagatgaaaaagcctgtgcattgtatcctgattcata
ttgtctatgacttaaaaaaaaaaaaagaaagaaacaaaagactgaaagta
gaatttattttggcttaaacaatagacacatagacacatacttctggcag
ctgaagaaactgccgatatgaaagtgccgggggttgtttcctccaaagat
tctctgctgtactctgactgatgtgactgtgtctgaggcaggggaattcc
tccaaggagtctgtactgtactataaacggccggcttatgaaggcttctt
tcctttttcttttataattatttttaagtcagctcacaaagcagtgcatt
tcattatgatattttcacatttaatattgcaaagataattcttaaaggga
gatttttacttcctgatactcccttttctgctcttgttaaaatattagaa
taaactgtatattttaaagaaccgacatcttttgtagttctgctaaaata
gcttaattttgctagcattgttctcaaggaaaattatacttgttcatttc
cataaatgtctgacatttatgcttctatggataagtctgtcactaattct
gttccaggctatctcagtctatgtctgatagggtaaaagcttctaagggc
agcattggggacaacaagaatcattaagagaggaataataaatacaagtt
gatattttcctcccaatgaactcctaacctgaaaaggtgaaatcagagct
agagggaaaggaatgtgacggggcaagcttgcccatcttgtgatgggcaa
gcaattactttatgtatatatcttaaagcaatcatcgcttataagtgggg
gatcacaagaaatcccactttacagcagtatccccttttccttagttcca
ctttccgcgttggtgacaactgaacatctggctgaagccctgttgatgta
ctttgggtggagtttcattacttgcttaaaggtaccagtgtgagatgaaa
catgtttcatcaag
gaattccctcccaacacgtttccaggcagagtgggcgtctacagaacatg
ctgttggagagagctggaggaggggggcagcagctccttttctcccaaac
tcccaccactcagcaaacacaaacaaaccttgcttagttctgggtttcag
gaacccacttgcagcttcctgtggttgttttctcatctgcaaccctaaca
tctgcatccctaacatctggggctggagagatgattctgtggctaagaat
cactgctctcgtagagaatcaagttccattcctagcacccacatcttaca
cctcataactacctgtaatttgagttccgtgggacctgtcatcctctctg
acccccacagacacccgcatggatgctggatgcggcacacatacacaaac
tcaggcacacacatacacatgaaataagaacaacaaaatctttgacaacc
acgtgtctgtctagagtagagaatgtttcccgggctcctttacatcgcca
ggtagtaaggtctgaccaagcagatgcaagacaagataaagtctgtgcag
aaaaataataattttttttttccaagacagggcttctctgtgtagccctg
gctgtcctggaatttgcttcatagacttggctggccttgagtttacagag
atcagcagggattactggtgttgccgccatgcctggctatgcaggaaagt
attgctaaagggcatgggagcttccatccttgtcccagacatcttggtaa
ctaggatgcaaaccaatggttgcgggaggggttggtgggtggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128528702_128529794
seq2: B6Ng01-261G14.b_47_1160 (reverse)

seq1  CTTGATG-AACATGTTTCATCTCAC---TGTACCTTT-AGC-AGTTATG-  43
      ||||||| |||||||||||||||||    |||||||| ||| ||| ||| 
seq2  CTTGATGAAACATGTTTCATCTCACACTGGTACCTTTAAGCAAGTAATGA  50

seq1  AACT-CACC--AAGT-CATCAACA-GGCTTCAGCCAGATGTTCAG-TGTC  87
      |||| ||||  |||| |||||||| |||||||||||||||||||| ||||
seq2  AACTCCACCCAAAGTACATCAACAGGGCTTCAGCCAGATGTTCAGTTGTC  100

seq1  A-CAACGC-GAAAGT-GAACTAAGGAAAAGGGGATACTGCTGTAAAGT-G  133
      | |||||| |||||| |||||||||||||||||||||||||||||||| |
seq2  ACCAACGCGGAAAGTGGAACTAAGGAAAAGGGGATACTGCTGTAAAGTGG  150

seq1  GATTTCTTGTGATCCCCACCTTAT-AGCGATGATTGCTTTAAGATATATA  182
      |||||||||||||||||  ||||| |||||||||||||||||||||||||
seq2  GATTTCTTGTGATCCCCCACTTATAAGCGATGATTGCTTTAAGATATATA  200

seq1  CAT-AAGTAATTGCTTGCCCATCACAAGATGGGCAAGCTTG-CCCGTCAC  230
      ||| ||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CATAAAGTAATTGCTTGCCCATCACAAGATGGGCAAGCTTGCCCCGTCAC  250

seq1  ATTCCTTTCCCTCTAGCTCTGATTTCACCTTTTCAGGTTAGGAGTTCATT  280
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTCCCTCTAGCTCTGATTTCACCTTTTCAGGTTAGGAGTTCATT  300

seq1  GGG-GGAAAATATCAACTTGTATTTATTATTCCTCTCTTAATGATTCTTG  329
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAAAATATCAACTTGTATTTATTATTCCTCTCTTAATGATTCTTG  350

seq1  TTGTCCCCAATGCTGCCCTTAGAAGCTTTTACCCTATCAGACATAGACTG  379
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCCCAATGCTGCCCTTAGAAGCTTTTACCCTATCAGACATAGACTG  400

seq1  AGATAGCCTGGAACAGAATTAGTGACAGACTTATCCATAGAAGCATAAAT  429
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGCCTGGAACAGAATTAGTGACAGACTTATCCATAGAAGCATAAAT  450

seq1  GTCAGACATTTATGGAAATGAACAAGTATAATTTTCCTTGAGAACAATGC  479
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGACATTTATGGAAATGAACAAGTATAATTTTCCTTGAGAACAATGC  500

seq1  TAGCAAAATTAAGCTATTTTAGCAGAACTACAAAAGATGTCGGTTCTTTA  529
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAAATTAAGCTATTTTAGCAGAACTACAAAAGATGTCGGTTCTTTA  550

seq1  AAATATACAGTTTATTCTAATATTTTAACAAGAGCAGAAAAGGGAGTATC  579
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATACAGTTTATTCTAATATTTTAACAAGAGCAGAAAAGGGAGTATC  600

seq1  AGGAAGTAAAAATCTCCCTTTAAGAATTATCTTTGCAATATTAAATGTGA  629
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTAAAAATCTCCCTTTAAGAATTATCTTTGCAATATTAAATGTGA  650

seq1  AAATATCATAATGAAATGCACTGCTTTGTGAGCTGACTTAAAAATAATTA  679
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCATAATGAAATGCACTGCTTTGTGAGCTGACTTAAAAATAATTA  700

seq1  TAAAAGAAAAAGGAAAGAAGCCTTCATAAGCCGGCCGTTTATAGTACAGT  729
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAAAAAGGAAAGAAGCCTTCATAAGCCGGCCGTTTATAGTACAGT  750

seq1  ACAGACTCCTTGGAGGAATTCCCCTGCCTCAGACACAGTCACATCAGTCA  779
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACTCCTTGGAGGAATTCCCCTGCCTCAGACACAGTCACATCAGTCA  800

seq1  GAGTACAGCAGAGAATCTTTGGAGGAAACAACCCCCGGCACTTTCATATC  829
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACAGCAGAGAATCTTTGGAGGAAACAACCCCCGGCACTTTCATATC  850

seq1  GGCAGTTTCTTCAGCTGCCAGAAGTATGTGTCTATGTGTCTATTGTTTAA  879
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTTTCTTCAGCTGCCAGAAGTATGTGTCTATGTGTCTATTGTTTAA  900

seq1  GCCAAAATAAATTCTACTTTCAGTCTTTTGTTTCTTTCTTTTTTTTTTTT  929
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAATAAATTCTACTTTCAGTCTTTTGTTTCTTTCTTTTTTTTTTTT  950

seq1  TAAGTCATAGACAATATGAATCAGGATACAATGCACAGGCTTTTTCATCT  979
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCATAGACAATATGAATCAGGATACAATGCACAGGCTTTTTCATCT  1000

seq1  CTAGCCCTTTCATTTTACAGATGAAGAAATTATATCTCAAGGACCAGAAT  1029
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCCTTTCATTTTACAGATGAAGAAATTATATCTCAAGGACCAGAAT  1050

seq1  TTACTTGCCAAGAGTCAATCACTGGTCAACAGAGCTAAGCTTTGAAGCAA  1079
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTGCCAAGAGTCAATCACTGGTCAACAGAGCTAAGCTTTGAAGCAA  1100

seq1  GAGGCTTTGAATTC  1093
      ||||||||||||||
seq2  GAGGCTTTGAATTC  1114

seq1: chr6_128406769_128407562
seq2: B6Ng01-261G14.g_66_860

seq1  GAATTCCCTCCCAACACGTTTCCAGGCAGAGTGGGCGTCTACAGAACATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCCCAACACGTTTCCAGGCAGAGTGGGCGTCTACAGAACATG  50

seq1  CTGTTGGAGAGAGCTGGAGGAGGGGGGCAGCAGCTCCTTTTCTCCCAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGGAGAGAGCTGGAGGAGGGGGGCAGCAGCTCCTTTTCTCCCAAAC  100

seq1  TCCCACCACTCAGCAAACACAAACAAACCTTGCTTAGTTCTGGGTTTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCACTCAGCAAACACAAACAAACCTTGCTTAGTTCTGGGTTTCAG  150

seq1  GAACCCACTTGCAGCTTCCTGTGGTTGTTTTCTCATCTGCAACCCTAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCACTTGCAGCTTCCTGTGGTTGTTTTCTCATCTGCAACCCTAACA  200

seq1  TCTGCATCCCTAACATCTGGGGCTGGAGAGATGATTCTGTGGCTAAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATCCCTAACATCTGGGGCTGGAGAGATGATTCTGTGGCTAAGAAT  250

seq1  CACTGCTCTCGTAGAGAATCAAGTTCCATTCCTAGCACCCACATCTTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTCTCGTAGAGAATCAAGTTCCATTCCTAGCACCCACATCTTACA  300

seq1  CCTCATAACTACCTGTAATTTGAGTTCCGTGGGACCTGTCATCCTCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATAACTACCTGTAATTTGAGTTCCGTGGGACCTGTCATCCTCTCTG  350

seq1  ACCCCCACAGACACCCGCATGGATGCTGGATGCGGCACACATACACAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCACAGACACCCGCATGGATGCTGGATGCGGCACACATACACAAAC  400

seq1  TCAGGCACACACATACACATGAAATAAGAACAACAAAATCTTTGACAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCACACACATACACATGAAATAAGAACAACAAAATCTTTGACAACC  450

seq1  ACGTGTCTGTCTAGAGTAGAGAATGTTTCCCGGGCTCCTTTACATCGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTCTGTCTAGAGTAGAGAATGTTTCCCGGGCTCCTTTACATCGCCA  500

seq1  GGTAGTAAGGTCTGACCAAGCAGATGCAAGACAAGATAAAGTCTGTGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTAAGGTCTGACCAAGCAGATGCAAGACAAGATAAAGTCTGTGCAG  550

seq1  AAAAATAATAATTTTTTTTTTCCAAGACAGGGCTTCTCTGTGTAGCCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAATAATTTTTTTTTTCCAAGACAGGGCTTCTCTGTGTAGCCCTG  600

seq1  GCTGTCCTGGAATTTGCTTCATAGACTTGGCTGGCCTTGAGTTTACAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCTGGAATTTGCTTCATAGACTTGGCTGGCCTTGAGTTTACAGAG  650

seq1  ATCAGCAGGGATTACTGGTGTTGCCGCCATGCCTGGCTATGCAGGAAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCAGGGATTACTGGTGTTGCCGCCATGCCTGGCTATGCAGGAAAGT  700

seq1  ATTGCTAAAGGGCATGGGAGCTTCCATCCTTGTCCCAGACATCTTGGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTAAAGGGCATGGGAGCTTCCATCCTTGTCCCAGACATCTTGGTAA  750

seq1  CTAGGATGCAAACCAATGGTTGCGGGAGGGGTTGGT-GGTGGAGG  794
      |||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTAGGATGCAAACCAATGGTTGCGGGAGGGGTTGGTGGGTGGAGG  795