BAC Information

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BAC

Clone NameB6Ng01-262F10
Chromosome6 (Build37)
Map Location 12,050,067 - 12,148,068
singlet/doubletdoublet
Overlap geneEG625347, LOC435879
Upstream geneNdufa4, Phf14, LOC100040844
Downstream geneThsd7a, LOC667735, LOC384350, Tmem106b, Gm467
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262F10.bB6Ng01-262F10.g
ACCGA066783GA066784
length691934
definitionB6Ng01-262F10.b B6Ng01-262F10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,050,067 - 12,050,756)(12,147,147 - 12,148,068)
sequence
gaattctctttattttcactggtatcatgtgctacttctgtgaggacgga
tggactctggactgctaatgctggtgcccacggaggactggcaaagcaac
tgcagctctgctgcacttgccgttgtagcagctcccagcacctctggagt
ggtcctggacgcaccggccatggtagtgcaagcagcagcaacgaaggaac
catgatcctgaaaatatgcttctatattaaccataacagcctccaaactc
caaggacttctactaatcctaatttttcagtcatgttccgccaacttcaa
cattccaatgatcgagagtaactatactaccaacatagtaagctacagcc
acttataaaggcatttctcccagaccaagatcacaaaaccccatgtagca
tctaaagattaaataaatcatgggcagtacatcatctggcacataagaga
tataaaataatgtttttcttaaaattaaaaatgtatagactaatcctata
ggtggaacaacaatatgaactaaccaatgccccccccccccaagctcgtg
tctctagctgcatatgtatcagaagatggcctagttggccatcagtggaa
agagaggtcccttggtattgcaaactttatatgccccggtacaggggaac
gccagggccaagaagtgggagtgggtgagtagggggagtgg

gaattcacaggcaaatggatggaacttgaaaatatgttggacatcaatga
gaggagaggcccttggtcatgggaaggctcaatgccctaatgtagggtaa
ttccagggtggagaggcaggagtgggtgggtaggtgagcaccatcataga
agcagggggagggaggatagaataaggggtttctgaagggaaaaccggga
aagggaatgacatttgaaatataaataaataaaatatccaataaaataaa
ttaaaaacaataaaacccagaaaataaatattcaccaaatgtgaattgat
ttcccttatttaaaaattgttatatgctttttataaatcaaattttaaaa
gtaaccacagtaggcttttttgtttttcctcacagaatgtctcaagaccc
tagtggacacaggaagctggggatagtaggaaaacacttggtcaggaaca
gtacaattgcgtctagttaactgttccaacatctagacaagagcatgaat
aaactatattaaatagtaatattaaaaaaacagagaaaagttaatgtagc
aaaatgtatacatataaaatgtttatttttttaaagctcaattttgaaag
atggcataggcatgttttccatttatattaagctctagaattgaaccaaa
taattttgattgaaaacaaaccaacaaaataattgcttatcaaaataatc
tgagtgttgaatacaacagaacacctttttagttaataaccgtagttttg
atcttcacgggtgcttgtttaatattaattttctagttgcattatgttac
aaactgaacacactattataatttgttcatttttattttatttaaaaaga
acaaaacataaacatgtccaatttgtagttaaatgatagtcatgatggaa
atattccgaaggaactgtggtgggagttttgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_12050067_12050756
seq2: B6Ng01-262F10.b_44_734

seq1  GAATTCTCTTTATTTTCACTGGTATCATGTGCTACTTCTGTGAGGACGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTATTTTCACTGGTATCATGTGCTACTTCTGTGAGGACGGA  50

seq1  TGGACTCTGGACTGCTAATGCTGGTGCCCACGGAGGACTGGCAAAGCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTCTGGACTGCTAATGCTGGTGCCCACGGAGGACTGGCAAAGCAAC  100

seq1  TGCAGCTCTGCTGCACTTGCCGTTGTAGCAGCTCCCAGCACCTCTGGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTCTGCTGCACTTGCCGTTGTAGCAGCTCCCAGCACCTCTGGAGT  150

seq1  GGTCCTGGACGCACCGGCCATGGTAGTGCAAGCAGCAGCAACGAAGGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGGACGCACCGGCCATGGTAGTGCAAGCAGCAGCAACGAAGGAAC  200

seq1  CATGATCCTGAAAATATGCTTCTATATTAACCATAACAGCCTCCAAACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATCCTGAAAATATGCTTCTATATTAACCATAACAGCCTCCAAACTC  250

seq1  CAAGGACTTCTACTAATCCTAATTTTTCAGTCATGTTCCGCCAACTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGACTTCTACTAATCCTAATTTTTCAGTCATGTTCCGCCAACTTCAA  300

seq1  CATTCCAATGATCGAGAGTAACTATACTACCAACATAGTAAGCTACAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCAATGATCGAGAGTAACTATACTACCAACATAGTAAGCTACAGCC  350

seq1  ACTTATAAAGGCATTTCTCCCAGACCAAGATCACAAAACCCCATGTAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATAAAGGCATTTCTCCCAGACCAAGATCACAAAACCCCATGTAGCA  400

seq1  TCTAAAGATTAAATAAATCATGGGCAGTACATCATCTGGCACATAAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGATTAAATAAATCATGGGCAGTACATCATCTGGCACATAAGAGA  450

seq1  TATAAAATAATGTTTTTCTTAAAATTAAAAATGTATAGACTAATCCTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATAATGTTTTTCTTAAAATTAAAAATGTATAGACTAATCCTATA  500

seq1  GGTGGAACAACAATATGAACTAACCAATGCCCCCCCCCCCCAAGCTCGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAACAACAATATGAACTAACCAATGCCCCCCCCCCCCAAGCTCGTG  550

seq1  TCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCAGTGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCAGTGGAA  600

seq1  AGAGAGGTCCCTTGGTATTGCAAACTTTATATGCCCCGGTACAGGGGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGTCCCTTGGTATTGCAAACTTTATATGCCCCGGTACAGGGGAAC  650

seq1  GCCAGGGCCAAGAAGTGGGAGTGGGTGAGTA-GGGGAGTGG  690
      ||||||||||||||||||||||||||||||| |||||||||
seq2  GCCAGGGCCAAGAAGTGGGAGTGGGTGAGTAGGGGGAGTGG  691


seq1: chr6_12147147_12148068
seq2: B6Ng01-262F10.g_64_997 (reverse)

seq1  TTTC-AAACTCC--ACACAGTTCC-TCCGAATATTT-CATCATGACTATC  45
      |||| |||||||   ||||||||| || |||||||| |||||||||||||
seq2  TTTCAAAACTCCCACCACAGTTCCTTCGGAATATTTCCATCATGACTATC  50

seq1  A-TTAACTAC-AATTTGACATGTTTATTGTTTTGTTCTTTTTATATAAAA  93
      | |||||||| |||| |||||||||| |||||||||||||||| ||||||
seq2  ATTTAACTACAAATTGGACATGTTTA-TGTTTTGTTCTTTTTAAATAAAA  99

seq1  T-AAAATGAACAAATTATAATAGTGTGTTCAGTTTGTAACATAATGC-AC  141
      | ||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TAAAAATGAACAAATTATAATAGTGTGTTCAGTTTGTAACATAATGCAAC  149

seq1  TAG-AAATTAATA-TAAACAAGCACCCGTGAAGATCAAAACTACGGTTAT  189
      ||| ||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TAGAAAATTAATATTAAACAAGCACCCGTGAAGATCAAAACTACGGTTAT  199

seq1  TAACTAAAAAGGTGTTCTGTTGTATTCAACACTCAGATTATTTTGATAAG  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAAAAAGGTGTTCTGTTGTATTCAACACTCAGATTATTTTGATAAG  249

seq1  CAATTATTTTGTTGGTTTGTTTTCAATCAAAATTATTTGGTTCAATTCTA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATTTTGTTGGTTTGTTTTCAATCAAAATTATTTGGTTCAATTCTA  299

seq1  GAGCTTAATATAAATGG-AAACATGCCTATGCCATCTTTC-AAATTGAGC  337
      ||||||||||||||||| |||||||||||||||||||||| |||||||||
seq2  GAGCTTAATATAAATGGAAAACATGCCTATGCCATCTTTCAAAATTGAGC  349

seq1  TTTAAAAAAATAAACATTTTATATGTATACATTTTGCTACATTAACTTTT  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAAATAAACATTTTATATGTATACATTTTGCTACATTAACTTTT  399

seq1  CTCTGTTTTTTTAATATTACTATTTAATATAGTTTATTCATGCTCTTGTC  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTTTTTTAATATTACTATTTAATATAGTTTATTCATGCTCTTGTC  449

seq1  TAGATGTTGGAACAGTTAACTAGACGCAATTGTACTGTTCCTGACCAAGT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTTGGAACAGTTAACTAGACGCAATTGTACTGTTCCTGACCAAGT  499

seq1  GTTTTCCTACTATCCCCAGCTTCCTGTGTCCACTAGGGTCTTGAGACATT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCTACTATCCCCAGCTTCCTGTGTCCACTAGGGTCTTGAGACATT  549

seq1  CTGTGAGGAAAAACAAAAAAGCCTACTGTGGTTACTTTTAAAATTTGATT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGGAAAAACAAAAAAGCCTACTGTGGTTACTTTTAAAATTTGATT  599

seq1  TATAAAAAGCATATAACAATTTTTAAATAAGGGAAATCAATTCACATTTG  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAAGCATATAACAATTTTTAAATAAGGGAAATCAATTCACATTTG  649

seq1  GTGAATATTTATTTTCTGGGTTTTATTGTTTTTAATTTATTTTATTGGAT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATATTTATTTTCTGGGTTTTATTGTTTTTAATTTATTTTATTGGAT  699

seq1  ATTTTATTTATTTATATTTCAAATGTCATTCCCTTTCCCGGTTTTCCCTT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTATTTATATTTCAAATGTCATTCCCTTTCCCGGTTTTCCCTT  749

seq1  CAGAAACCCCTTATTCTATCCTCCCTCCCCCTGCTTCTATGATGGTGCTC  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACCCCTTATTCTATCCTCCCTCCCCCTGCTTCTATGATGGTGCTC  799

seq1  ACCTACCCACCCACTCCTGCCTCTCCACCCTGGAATTACCCTACATTAGG  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACCCACCCACTCCTGCCTCTCCACCCTGGAATTACCCTACATTAGG  849

seq1  GCATTGAGCCTTCCCATGACCAAGGGCCTCTCCTCTCATTGATGTCCAAC  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGAGCCTTCCCATGACCAAGGGCCTCTCCTCTCATTGATGTCCAAC  899

seq1  ATATTTTCAAGTTCCATCCATTTGCCTGTGAATTC  922
      |||||||||||||||||||||||||||||||||||
seq2  ATATTTTCAAGTTCCATCCATTTGCCTGTGAATTC  934


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