BAC Information

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BAC

Clone NameB6Ng01-262G09
Chromosome6 (Build37)
Map Location 35,923,434 - 35,986,117
singlet/doubletdoublet
Overlap genenone
Upstream gene2010107G12Rik, Cnot4, Nup205, 1810058I24Rik, Slc13a4, BC064033, 1700065J11Rik, Mtpn, LOC100039312, LOC100039327
Downstream gene9330158H04Rik, Chrm2, EG620863, LOC100039370, Ptn, LOC100039514, Dgki, EG665024
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262G09.bB6Ng01-262G09.g
ACCGA066823GA066824
length1,0161,109
definitionB6Ng01-262G09.b B6Ng01-262G09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,985,601 - 35,986,117)(35,923,434 - 35,924,556)
sequence
gaattcatatagctatatgaattaaaatttaaactatagatgagctaaaa
aacagaaatatttctgaaggcagaatatgtaaattggcacatacatctgt
aaaattttccacatcaagaaaagaaccaaatattagttcatattgttgtt
ccacctatagggttgcaaaccccttcagctccttggctgctttctctagc
tcctccattgggggtcctgtgttccatccaatagctgactgtgagcatcc
acttctctatttgccaggcactggcatagcctcatacgagacagctatac
cagggtcccttcagcaaaatcttgttagtgtatgcaatagtgtctgggtt
tcttggctgattatgggatgtacccctgggtggggtagtctctggatagt
ccatcctttcatcttagctccaaactttgtctctataactcctttcatgg
gtatttttccctattctaaggtggaatgaattagccacccgttggtcttc
cctcttcttgattttcttgtgttttgcaaatagtatcttgggtgttctat
gtttctgggctaattatccacttatcagtgagtgcatatctaatgacttc
ttttgtgaatgggttacctagctaaggatgatatcctccagatacatcca
tttgtccaagaatttcataaattcattggtttttataactgagtagtact
ccattgtgtaaatatagcacattttctgtatccattcttctgttgaggga
catctgggttctttccagcttctggctattgtaaataaggctactatgaa
catagtggagcatgtgttcttattaccagttggaacatcttctgggtata
tgcccaggagaggtattgctggatcttctggtagtattatgtctaatttt
ctgaggaaccaacagactgacctccagcgtggttgtacaagcttgcaatc
ctaccagcaatggagagtgttcttctttctcatatccttgccagcatctg
ctgtcacctgaatttt

gaattccatcccatctttgtttcaccaaatagtaatgttaagagacagaa
ggaagaaatttgaacaattcatgagaaatgtggcagattcatgacaacta
taaaaggaaatttgcacagctgagagtcctagcaaatagtgtgggtctca
gagtaacaaaacaatccctgggccctaaagtgaggactgttgtgacaatg
gtactcccacagaggctgcctaccccaccacaccagttaacaacacaaca
gaaactttccttccagtgtcctctataacaggctgtctctccatatgaag
taaaggagaaattctttctgattctgaaagcaggtgaagaggagactaga
gtctaatttcatatgaagagtgaatattaaatatttctctgaaagagaga
attgctaagataatgaaatctgtcatcttgaattttggagagaagcaatt
agatctaccagaaagatatgaacaatgttggatacaagcctccttagctt
gccaatgtctgaccctgtctctcttacaaattcctatgttaatatcctag
tgcactagatgatgaaatagaaagtgagaccttggaaggtgattaggtcc
tagcatgatcaggtccaagcacaatggaagcagagacttttaatagaatt
ctgaaaaaaaaaaaaaaaaaaaaaaaaagccccagcgtcttgctcagtac
tccagccaacttcagtaaggagatcattcttccacgaagaagtaagtccc
cagcagatgacagatctgaaatcactttaaccattgagcttcctagcctt
tggacctgtgagaatgactttctgctgctggttagttactatgctggggt
agttcattatagaagcccttattgtttgcttagcatctttcaatgggaaa
atagtcttagtgagggtgttttcagcataaggtaaccactactctgtgtg
caattggtagcacataaacagacactagtgcatatctatgacttctttgt
gattggtacctcacttagatgatatcctccagatacattcattgtcataa
attcaatgtttgaatagctgatagtacctccatgtgtaaatgtacccatt
tcctgtatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_35985601_35986117
seq2: B6Ng01-262G09.b_45_561 (reverse)

seq1  AGAAAATCAAGAAGAGGGAAGACCAACGGGTGGCTAATTCATTCCACCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATCAAGAAGAGGGAAGACCAACGGGTGGCTAATTCATTCCACCTT  50

seq1  AGAATAGGGAAAAATACCCATGAAAGGAGTTATAGAGACAAAGTTTGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGGGAAAAATACCCATGAAAGGAGTTATAGAGACAAAGTTTGGAG  100

seq1  CTAAGATGAAAGGATGGACTATCCAGAGACTACCCCACCCAGGGGTACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATGAAAGGATGGACTATCCAGAGACTACCCCACCCAGGGGTACAT  150

seq1  CCCATAATCAGCCAAGAAACCCAGACACTATTGCATACACTAACAAGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAATCAGCCAAGAAACCCAGACACTATTGCATACACTAACAAGATT  200

seq1  TTGCTGAAGGGACCCTGGTATAGCTGTCTCGTATGAGGCTATGCCAGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAAGGGACCCTGGTATAGCTGTCTCGTATGAGGCTATGCCAGTGC  250

seq1  CTGGCAAATAGAGAAGTGGATGCTCACAGTCAGCTATTGGATGGAACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAAATAGAGAAGTGGATGCTCACAGTCAGCTATTGGATGGAACACA  300

seq1  GGACCCCCAATGGAGGAGCTAGAGAAAGCAGCCAAGGAGCTGAAGGGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCCCAATGGAGGAGCTAGAGAAAGCAGCCAAGGAGCTGAAGGGGTT  350

seq1  TGCAACCCTATAGGTGGAACAACAATATGAACTAATATTTGGTTCTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACCCTATAGGTGGAACAACAATATGAACTAATATTTGGTTCTTTTC  400

seq1  TTGATGTGGAAAATTTTACAGATGTATGTGCCAATTTACATATTCTGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTGGAAAATTTTACAGATGTATGTGCCAATTTACATATTCTGCCT  450

seq1  TCAGAAATATTTCTGTTTTTTAGCTCATCTATAGTTTAAATTTTAATTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATATTTCTGTTTTTTAGCTCATCTATAGTTTAAATTTTAATTCA  500

seq1  TATAGCTATATGAATTC  517
      |||||||||||||||||
seq2  TATAGCTATATGAATTC  517


seq1: chr6_35923434_35924556
seq2: B6Ng01-262G09.g_64_1172

seq1  GAATTCCATCCCATCTTTGTTTCACCAAATAGTAATGTTAAGAGACAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCCCATCTTTGTTTCACCAAATAGTAATGTTAAGAGACAGAA  50

seq1  GGAAGAAATTTGAACAATTCATGAGAAATGTGGCAGATTCATGACAACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAATTTGAACAATTCATGAGAAATGTGGCAGATTCATGACAACTA  100

seq1  TAAAAGGAAATTTGCACAGCTGAGAGTCCTAGCAAATAGTGTGGGTCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGAAATTTGCACAGCTGAGAGTCCTAGCAAATAGTGTGGGTCTCA  150

seq1  GAGTAACAAAACAATCCCTGGGCCCTAAAGTGAGGACTGTTGTGACAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAACAAAACAATCCCTGGGCCCTAAAGTGAGGACTGTTGTGACAATG  200

seq1  GTACTCCCACAGAGGCTGCCTACCCCACCACACCAGTTAACAACACAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCCCACAGAGGCTGCCTACCCCACCACACCAGTTAACAACACAACA  250

seq1  GAAACTTTCCTTCCAGTGTCCTCTATAACAGGCTGTCTCTCCATATGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTTCCTTCCAGTGTCCTCTATAACAGGCTGTCTCTCCATATGAAG  300

seq1  TAAAGGAGAAATTCTTTCTGATTCTGAAAGCAGGTGAAGAGGAGACTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAGAAATTCTTTCTGATTCTGAAAGCAGGTGAAGAGGAGACTAGA  350

seq1  GTCTAATTTCATATGAAGAGTGAATATTAAATATTTCTCTGAAAGAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAATTTCATATGAAGAGTGAATATTAAATATTTCTCTGAAAGAGAGA  400

seq1  ATTGCTAAGATAATGAAATCTGTCATCTTGAATTTTGGAGAGAAGCAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTAAGATAATGAAATCTGTCATCTTGAATTTTGGAGAGAAGCAATT  450

seq1  AGATCTACCAGAAAGATATGAACAATGTTGGATACAAGCCTCCTTAGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTACCAGAAAGATATGAACAATGTTGGATACAAGCCTCCTTAGCTT  500

seq1  GCCAATGTCTGACCCTGTCTCTCTTACAAATTCCTATGTTAATATCCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATGTCTGACCCTGTCTCTCTTACAAATTCCTATGTTAATATCCTAG  550

seq1  TGCACTAGATGATGAAATAGAAAGTGAGACCTTGGAAGGTGATTAGGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTAGATGATGAAATAGAAAGTGAGACCTTGGAAGGTGATTAGGTCC  600

seq1  TAGCATGATCAGGTCCAAGCACAATGGAAGCAGAGACTTTTAATAGAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATGATCAGGTCCAAGCACAATGGAAGCAGAGACTTTTAATAGAATT  650

seq1  CTGAAAAAAAAAAAAAAAAAAAAAAAAAGCCCCAGCGTCTTGCTCAGTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAAAAAAAAAAAAAAAAAAAAAAAGCCCCAGCGTCTTGCTCAGTAC  700

seq1  TCCAGCCAACTTCAGTAAGGAGATCATTCTTCCACGAAGAAGTAAGTCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCAACTTCAGTAAGGAGATCATTCTTCCACGAAGAAGTAAGTCCC  750

seq1  CAGCAGATGACAGATCTGAAATCACTTTAACCATTGAGCTTCCTAGCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGATGACAGATCTGAAATCACTTTAACCATTGAGCTTCCTAGCCTT  800

seq1  TGGACCTGTGAGAAATGACTTTCTGCTGCTGGTTAGTTACTATGCTGGGG  850
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGGACCTGTGAG-AATGACTTTCTGCTGCTGGTTAGTTACTATGCTGGGG  849

seq1  TAGTTCATTATAGAAGCCCTTATTGTTTGCTTAGCATCTTTTCAATGGGA  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAGTTCATTATAGAAGCCCTTATTGTTTGCTTAGCATC-TTTCAATGGGA  898

seq1  AAATAGTCTTAGTGAGGGTGTTTTCAGCATAAGGGTAACCACTACTCTGT  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAATAGTCTTAGTGAGGGTGTTTTCAGCATAA-GGTAACCACTACTCTGT  947

seq1  GTGCAATTGGTAGCACATAAACAGGACACTAGTGCATATCTAATGACTTC  1000
      ||||||||||||||||||||||| ||||||||||||||||| ||||||||
seq2  GTGCAATTGGTAGCACATAAACA-GACACTAGTGCATATCT-ATGACTTC  995

seq1  TTTTGTGATTGGGTTACCTCACTAAGGATGATATCCTCCAGATACATCCA  1050
       |||||||||||  ||||||||| | ||||||||||||||||||||| ||
seq2  -TTTGTGATTGG--TACCTCACTTA-GATGATATCCTCCAGATACATTCA  1041

seq1  TTTGTCCATAAATCCATTGTTTTTAATAGCTGAGTAGTA-CTCCATTGTG  1099
       |||| ||||||| || || ||| ||||||||| ||||| ||||| ||||
seq2  -TTGT-CATAAATTCAATG-TTTGAATAGCTGA-TAGTACCTCCA-TGTG  1086

seq1  TAAATGTACCACATTTTCTGTATC  1123
      |||||||||| ||||| |||||||
seq2  TAAATGTACC-CATTTCCTGTATC  1109


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