BAC Information

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BAC

Clone NameB6Ng01-262M05
Chromosome6 (Build37)
Map Location 131,864,677 - 131,865,438
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC625628, EG625648, LOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114
Downstream geneLOC639802, EG114600, Prb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262M05.bB6Ng01-262M05.g
ACCGA067094GA067095
length1,220762
definitionB6Ng01-262M05.b B6Ng01-262M05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggggtacagcttcttgtcatatttaaaatacattatctagtag
ataaccttttccttgggcccttatagtctttctcctctgtcttccacaat
gttttctgagccttagatgtaggtgacagctgttttgtaaaagtataaaa
tggcttaggcaccccatgaccatttgttctctggaatttgaatagtagaa
tatttttatattctccatgtcttttacaaaaaggaagttctttgatgaag
gtggaaaattatactttctgtaggtataagatttcaagtatttgaaatac
agttagaaagtatactgatttaggaaatattcagtagtaggttcattttt
ttacttaccattttgctcaggacttttaaatactatggtaccaggttcca
ggaaggagaattcaagcattgttcaaggatagcttctccaatgcctgtct
ccaagtgtgtagagtcaactattatagagttctgccttcattgtgtggaa
ggcaaccaaagatagtggcaatatcctgtattcttttgggtgtcttctgg
accaggagagcaaagggaagtttctcagatttgatactgagatatataac
agggagtctatgcttctttggggcattagaatagaatatgtaaacagtat
aaagaaataaaaaaaccaaagtataaagtatctcaaataaatatgcatta
ggtatttaaacagaatttaaaggaagaaaattattaacacacttccatat
tagagtttagtattcttcaaagttagaaaatttcaaattgaaagtgcttc
aatattttatctcactctagtcagtctgaccaagttcaagaaaccagatg
actatacttgcactaggacatatagtgaaaggagaagcctcacttatggt
ttttggatttgtaaactggaacatttagtctgaaaatagggtagagaact
ctaaaaacttaaaaatatttttttcttacaacccagcttaaccactctaa
tcatatgcccaaagacttaacatttctatttgcacagatagtctattcag
ccaattttaaggtctccttcaaaatgcataggactgtcatcatcccagtg
tctacaatttgaatagattgaaaattgaataggatgaatttggttcatac
aaggtcgatgttacttggccttagagaaacaatagtttccatgtgctcct
gtggttcaacgggggaaatc
gaattctatagccaattaacacaggttcattgtaataggtttctgaagga
caaatgtctcaggaattgactgaaaccaaaaacaaaagaggaaagttctt
gaaaaatttgatcatgataaaatttcctaatgtgaaagagaggtgggaac
tactaatgtgagagaggtgggaacatacattcttcttcctctattacctt
ccttccttccttccttccttccttccttccttccttcctttcctttcctt
tcctattttcttgggtttactcttgtcagacacagattagcaattagaat
tcacctcttaattataaaataaaagtgaataaaggaatgaattgatcgtt
catccattgcttgtgattcaaaatactccagaagatatgtccaaagatgt
tcactgtgatacattgtcattgggtgaaaaagtgaaactagactaaatgt
ctatccacagaagtagatgtaagaagattatgacagagcatttataaatg
atagtatattatcttagtctccagaagaacccgagtacacaaagaacaaa
ataaagacaagaatgttggcaaaaaaataccgttgggagatccatgaact
tgtttgaagcaaagaagttttgtctctagctgcatatgtatcaaaagatg
gcctaataggccatcacttgaaagagagacccattggacttgcaaacttt
atatgccccagtacaggggaacaccagggccaaaaagtgggagtgggtgg
gtaggggagtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_131864677_131865438
seq2: B6Ng01-262M05.g_64_825 (reverse)

seq1  ACACTCCCCTACCCACCCACTCCCACTTTTTGGCCCTGGTGTTCCCCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCCCCTACCCACCCACTCCCACTTTTTGGCCCTGGTGTTCCCCTGT  50

seq1  ACTGGGGCATATAAAGTTTGCAAGTCCAATGGGTCTCTCTTTCAAGTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGGCATATAAAGTTTGCAAGTCCAATGGGTCTCTCTTTCAAGTGAT  100

seq1  GGCCTATTAGGCCATCTTTTGATACATATGCAGCTAGAGACAAAACTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTATTAGGCCATCTTTTGATACATATGCAGCTAGAGACAAAACTTCT  150

seq1  TTGCTTCAAACAAGTTCATGGATCTCCCAACGGTATTTTTTTGCCAACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCAAACAAGTTCATGGATCTCCCAACGGTATTTTTTTGCCAACAT  200

seq1  TCTTGTCTTTATTTTGTTCTTTGTGTACTCGGGTTCTTCTGGAGACTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTCTTTATTTTGTTCTTTGTGTACTCGGGTTCTTCTGGAGACTAAG  250

seq1  ATAATATACTATCATTTATAAATGCTCTGTCATAATCTTCTTACATCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATACTATCATTTATAAATGCTCTGTCATAATCTTCTTACATCTAC  300

seq1  TTCTGTGGATAGACATTTAGTCTAGTTTCACTTTTTCACCCAATGACAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGGATAGACATTTAGTCTAGTTTCACTTTTTCACCCAATGACAAT  350

seq1  GTATCACAGTGAACATCTTTGGACATATCTTCTGGAGTATTTTGAATCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCACAGTGAACATCTTTGGACATATCTTCTGGAGTATTTTGAATCAC  400

seq1  AAGCAATGGATGAACGATCAATTCATTCCTTTATTCACTTTTATTTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATGGATGAACGATCAATTCATTCCTTTATTCACTTTTATTTTATA  450

seq1  ATTAAGAGGTGAATTCTAATTGCTAATCTGTGTCTGACAAGAGTAAACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAGGTGAATTCTAATTGCTAATCTGTGTCTGACAAGAGTAAACCC  500

seq1  AAGAAAATAGGAAAGGAAAGGAAAGGAAGGAAGGAAGGAAGGAAGGAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATAGGAAAGGAAAGGAAAGGAAGGAAGGAAGGAAGGAAGGAAGG  550

seq1  AAGGAAGGAAGGAAGGTAATAGAGGAAGAAGAATGTATGTTCCCACCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGTAATAGAGGAAGAAGAATGTATGTTCCCACCTCT  600

seq1  CTCACATTAGTAGTTCCCACCTCTCTTTCACATTAGGAAATTTTATCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACATTAGTAGTTCCCACCTCTCTTTCACATTAGGAAATTTTATCATG  650

seq1  ATCAAATTTTTCAAGAACTTTCCTCTTTTGTTTTTGGTTTCAGTCAATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATTTTTCAAGAACTTTCCTCTTTTGTTTTTGGTTTCAGTCAATTC  700

seq1  CTGAGACATTTGTCCTTCAGAAACCTATTACAATGAACCTGTGTTAATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACATTTGTCCTTCAGAAACCTATTACAATGAACCTGTGTTAATTG  750

seq1  GCTATAGAATTC  762
      ||||||||||||
seq2  GCTATAGAATTC  762