BAC Information

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BAC

Clone NameB6Ng01-263P17
Chromosome6 (Build37)
Map Location 119,674,597 - 119,771,527
singlet/doubletdoublet
Overlap geneErc1
Upstream geneCacna1c, Dcp1b, Cacna2d4, Lrtm2, Adipor2, Wnt5b, Fbxl14
Downstream geneLOC666887, Rad52, Wnk1, EG406236, Ninj2, B4galnt3, Ccdc77, Jarid1a, Il17ra, Cecr6, Cecr5, 1700072O05Rik, Cecr2, Slc25a18, Atp6v1e1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263P17.bB6Ng01-263P17.g
ACCGA068008GA068009
length468925
definitionB6Ng01-263P17.b B6Ng01-263P17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,674,597 - 119,675,070)(119,770,607 - 119,771,527)
sequence
cgtaacaataagcagtaccttcttttgtttcaaaatactccctacaaagc
aaagagattctctcaaactaaaaaactggtccatgtcaaataatagagtt
aagagaatcttatagacagaaaggcagaaaatatttgcaaaccagaaaac
aagccggataaggagttaatatacaatttagtgaaaaacagttcatttca
ctaagagaaaaaaagtaaagaatggggaaaggatatcggacgattgcata
cacgtgctagcttcatggaggctgaagtctaaaaatgatgtgagtacaag
accagtccaaacaatatacaaaagcaaccaacttaaagaaggtggggttg
gaggttggaggtgtgtggtaaaatgaacaaaagacttaacattttataga
aaatgcagctgggcagcggtggcacacacctttagtccaagcacttcaga
agcaggcagatttctgag
gaattctctgtgcttggatttagttgtatgcttattttaaggataattat
tttatggctgaggagatggctcagttgttaaaatgcaagtgaggacctga
gtttgatccctatgtaacagctgggcatggtgatatgcacctgtgattct
agcccacaaggagacaggaggacccatccctgcagctgctggccagctag
tcttgtggcatcctcaagtcctaggtgtaaacagagatgaagaatgaatc
tggaagtcatctgacatcaagatttagcttctacatgaacacacagctat
aagcgtgcatatttgcatgttcacaaagctgtacattcatgtatacacat
gaacgtatacagatatacacacagtaaataattattttaatgctctttca
ctaaaattttgtttgaatagaatattctgtttgatattgtaggatggcaa
gtgaactgcctttaatttttttctttttctttttggtggttagattgtat
ttgtgtgtgtgtgtttggatgtgcctgtgctgtggtgcgtgtgtggaggt
cagatgatagcttttgggaacaggtttgcttccatggtgtgtcctgagga
tcaccctcaggctccggagataaattcttttgcctcttgaaccatctcac
tagctctgatgttttctttttgcttagaatatttattctttttggaattg
gctgcttctcttttctgttgaggtgctgaagattgaacctaaggttttat
acctgataaacaaatgctctaccactaaactataccttctaacctagggt
tttaatttttatttattagcccttttgcatgaatagaaatatataattga
atatgagacatttcttcttgagaagttacatttatttacttgcaatgtag
tgggatagtttgaaaataattcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_119674597_119675070
seq2: B6Ng01-263P17.b_50_523

seq1  GAATTCCGTAACAATAAGCAGTACCTTCTTTTGTTTCAAAATACTCCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCGTAACAATAAGCAGTACCTTCTTTTGTTTCAAAATACTCCCTA  50

seq1  CAAAGCAAAGAGATTCTCTCAAACTAAAAAACTGGTCCATGTCAAATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAAAGAGATTCTCTCAAACTAAAAAACTGGTCCATGTCAAATAAT  100

seq1  AGAGTTAAGAGAATCTTATAGACAGAAAGGCAGAAAATATTTGCAAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTAAGAGAATCTTATAGACAGAAAGGCAGAAAATATTTGCAAACCA  150

seq1  GAAAACAAGCCGGATAAGGAGTTAATATACAATTTAGTGAAAAACAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAAGCCGGATAAGGAGTTAATATACAATTTAGTGAAAAACAGTTC  200

seq1  ATTTCACTAAGAGAAAAAAAGTAAAGAATGGGGAAAGGATATCGGACGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACTAAGAGAAAAAAAGTAAAGAATGGGGAAAGGATATCGGACGAT  250

seq1  TGCATACACGTGCTAGCTTCATGGAGGCTGAAGTCTAAAAATGATGTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATACACGTGCTAGCTTCATGGAGGCTGAAGTCTAAAAATGATGTGAG  300

seq1  TACAAGACCAGTCCAAACAATATACAAAAGCAACCAACTTAAAGAAGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGACCAGTCCAAACAATATACAAAAGCAACCAACTTAAAGAAGGTG  350

seq1  GGGTTGGAGGTTGGAGGTGTGTGGTAAAATGAACAAAAGACTTAACATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGGAGGTTGGAGGTGTGTGGTAAAATGAACAAAAGACTTAACATTT  400

seq1  TATAGAAAATGCAGCTGGGCAGCGGTGGCACACACCTTTAGTCCAAGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAAATGCAGCTGGGCAGCGGTGGCACACACCTTTAGTCCAAGCAC  450

seq1  TTCAGAAGCAGGCAGATTTCTGAG  474
      ||||||||||||||||||||||||
seq2  TTCAGAAGCAGGCAGATTTCTGAG  474

seq1: chr6_119770607_119771527
seq2: B6Ng01-263P17.g_68_992 (reverse)

seq1  ACTGAATTATTTTCCAACTATCCCACTACATTCCAAGTAAATAAATGTAA  50
      | |||||||||||| ||||||||||||||||| |||||||||||||||||
seq2  AATGAATTATTTTCAAACTATCCCACTACATTGCAAGTAAATAAATGTAA  50

seq1  CTCTACAAGAAGAAATGTCTCATATTCAATTATATATTTCTATTCATGC-  99
      ||   |||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTTCTCAAGAAGAAATGTCTCATATTCAATTATATATTTCTATTCATGCA  100

seq1  AAAGGCCTAATAAAT-AAAATTAAAACCCTAGGTTAG-AGGTATAGTTTA  147
      ||||| ||||||||| ||||||||||||||||||||| ||||||||||||
seq2  AAAGGGCTAATAAATAAAAATTAAAACCCTAGGTTAGAAGGTATAGTTTA  150

seq1  GTGGTAGAGCATTTGTTTATCAGGTATAAAACCTTAGGTTCAATCTTCAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAGAGCATTTGTTTATCAGGTATAAAACCTTAGGTTCAATCTTCAG  200

seq1  CACCTCAACAGAAAAGAGAAGCAGCCAATTCCAAAAAGAATAAATATTCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCAACAGAAAAGAGAAGCAGCCAATTCCAAAAAGAATAAATATTCT  250

seq1  AAGCAAAAAGAAAACATCAGAGCTAGTGAGATGGTTCAAGAGGCAAAAGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAAAGAAAACATCAGAGCTAGTGAGATGGTTCAAGAGGCAAAAGA  300

seq1  ATTTATCTCCGGAGCCTGAGGGTGATCCTCAGGACACACCATGGAAGCAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCTCCGGAGCCTGAGGGTGATCCTCAGGACACACCATGGAAGCAA  350

seq1  ACCTGTTCCCAAAAGCTATCATCTGACCTCCACACACGCACCACAGCACA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTTCCCAAAAGCTATCATCTGACCTCCACACACGCACCACAGCACA  400

seq1  GGCACATCCAAACACACACACACAAATACAATCTAACCACCAAAAAGAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACATCCAAACACACACACACAAATACAATCTAACCACCAAAAAGAAA  450

seq1  AAGAAAAAAATTAAAGGCAGTTCACTTGCCATCCTACAATATCAAACAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAAATTAAAGGCAGTTCACTTGCCATCCTACAATATCAAACAGA  500

seq1  ATATTCTATTCAAACAAAATTTTAGTGAAAGAGCATTAAAATAATTATTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTATTCAAACAAAATTTTAGTGAAAGAGCATTAAAATAATTATTT  550

seq1  ACTGTGTGTATATCTGTATACGTTCATGTGTATACATGAATGTACAGCTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTGTATATCTGTATACGTTCATGTGTATACATGAATGTACAGCTT  600

seq1  TGTGAACATGCAAATATGCACGCTTATAGCTGTGTGTTCATGTAGAAGCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACATGCAAATATGCACGCTTATAGCTGTGTGTTCATGTAGAAGCT  650

seq1  AAATCTTGATGTCAGATGACTTCCAGATTCATTCTTCATCTCTGTTTACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTGATGTCAGATGACTTCCAGATTCATTCTTCATCTCTGTTTACA  700

seq1  CCTAGGACTTGAGGATGCCACAAGACTAGCTGGCCAGCAGCTGCAGGGAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGACTTGAGGATGCCACAAGACTAGCTGGCCAGCAGCTGCAGGGAT  750

seq1  GGGTCCTCCTGTCTCCTTGTGGGCTAGAATCACAGGTGCATATCACCATG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCTCCTGTCTCCTTGTGGGCTAGAATCACAGGTGCATATCACCATG  800

seq1  CCCAGCTGTTACATAGGGATCAAACTCAGGTCCTCACTTGCATTTTAACA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCTGTTACATAGGGATCAAACTCAGGTCCTCACTTGCATTTTAACA  850

seq1  ACTGAGCCATCTCCTCAGCCATAAAATAATTATCCTTAAAATAAGCATAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCCATCTCCTCAGCCATAAAATAATTATCCTTAAAATAAGCATAC  900

seq1  AACTAAATCCAA-CACAGAGAATTC  921
      |||||||||||| ||||||||||||
seq2  AACTAAATCCAAGCACAGAGAATTC  925