BAC Information

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BAC

Clone NameB6Ng01-264H13
Chromosome6 (Build37)
Map Location 25,662,166 - 25,663,344
singlet/doubletsinglet
Overlap genenone
Upstream gene4932701A20Rik, Hyal4, Spam1, Hyal5, 6332401O19Rik, LOC384358, Gpr37
Downstream genePot1a, EG626912, LOC100041210
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264H13.bB6Ng01-264H13.g
ACCGA068368GA068369
length1,1691,183
definitionB6Ng01-264H13.b B6Ng01-264H13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgttcacttctgagccccattttttaatggggttattcgatt
ttctgaagtccaccttcttgtgttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattggaattttaatggggattgcatttacaatcagattctt
acattaacacaatactacaaacatagtaatagacacaaatataatcatat
ttgattttatatgcatacacacatgcgtgtatgtgcatgaacaacttcat
cctaattaatttctgactacaatccaagcaaagaaaatgcactttcaaag
aaaccctgatgactctaccattttcttcagtcgtctattctctcagctag
ttaaatgaacttacaacccaagttagccctttcttcttcttatggatcaa
aatgatttatacatgggtgttacaatgtctagcagatcttattaataagg
cttccttatacagtgaaataaacagaaacaaaagaggtttttatcagaca
cacaaaattatctcccaatttgcaaataaaataaaataaaataaaagcct
attaaaatgaatataccaaacagtagaaatttttataagaaactttctgt
tcagttaaaaaaatgtaaaatactgtaactagaagcatcacagagaatat
tttgatttagggaagctagtgtgtctcttcacaataatctaaacatgtgt
ctttatctgttcccctcctatctaagcttacacatatggcagccacaaga
tgatatttttacttatggatcatcaacttttgtcagctaagtgttagtct
tatctaaaatttgcttgccatttttatttgtaaaatttaaagaaagtatt
ccagagaacatttggagcaattaatatgaagtttacatagagtgtcatat
atgaaaatgaaaatgtccaccctgtagatgagtctgacccattttgtttc
tttccttcatttcctttctctttttcttctgtacatctcttctctctctc
tgctgttttttatttttctacctcatagctacatttctgtaacaggcaag
cctgtatttctcaatggcagtcggttctcttaaatccaccaggcctgtct
cactgagccattagttggt
gaattctcacctgaggaatactgaatgggagagaagcacctaaaaaaatg
ttcaacatccttaatcatcagtgaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagatgaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaaacagtctggcggttcttca
gaaaattggacatagtactaccggaggatccagcaatacctctcctggac
atatatccagaagatgccccaactggtaagaaggacacatgctccattat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaatagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataagatacaatatgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagtaacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcataccctagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtgggatgctcacagttagctaatggatggatcacagggctccc
aatggaggagctaagagaaagtacccatggagctaatgggatctgcaacc
ttaatagtggacaccattatgacctaccagtaccccggagcttcttgact
ctagctgcatatgttatcaaaagatgcctagtcagcatcactggaagaga
ggcccaatgaacgctactttaatggccagttacgaacgcctagtctaatg
ggatgtgcttgcgttacgggcaaatctcgtcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_25662166_25663344
seq2: B6Ng01-264H13.b_41_1209 (reverse)

seq1  ACCAACTAATAGGGCCTCAGTGAGCCAGTGCTGTGTGATGT-AGAGACAG  49
      ||||||||||   | ||||||||| |||  |||   ||| | |||||   
seq2  ACCAACTAAT---GGCTCAGTGAGACAGGCCTGGTGGATTTAAGAGAACC  47

seq1  AAATTGCAATGAGAAATACA-GCCTGCTTGTTACAGAAATGTAGCTATGA  98
       | |  || ||||||||||| || ||| ||||||||||||||||||||||
seq2  GACTGCCATTGAGAAATACAGGCTTGCCTGTTACAGAAATGTAGCTATGA  97

seq1  AGTAGGAAAAATAAAAACAGGCAGAGAG-GAGAAGAAAGAGAATGTACAG  147
       ||| ||||||||||||   |||||||| |||||||      ||||||||
seq2  GGTA-GAAAAATAAAAAACAGCAGAGAGAGAGAAGA-----GATGTACAG  141

seq1  AAGGAAAAGAGAAAGGGAAATGAAGGAAAAGAAAACAAAATGGGTTCAGA  197
      ||| |||||||||| ||||||||||||||   |||||||||||| |||||
seq2  AAGAAAAAGAGAAA-GGAAATGAAGGAAA--GAAACAAAATGGG-TCAGA  187

seq1  CTCATCTACAGGGTGGACATTTTCATTTTCATATATGACACTCTATGTAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTACAGGGTGGACATTTTCATTTTCATATATGACACTCTATGTAA  237

seq1  ACTTCATATTAATTGCTCCAAATGTTCTCTGGAATACTTTCTTTAAATTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATATTAATTGCTCCAAATGTTCTCTGGAATACTTTCTTTAAATTT  287

seq1  TACAAATAAAAATGGCAAGCAAATTTTAGATAAGACTAACACTTAGCTGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATAAAAATGGCAAGCAAATTTTAGATAAGACTAACACTTAGCTGA  337

seq1  CAAAAGTTGATGATCCATAAGTAAAAATATCATCTTGTGGCTGCCATATG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTTGATGATCCATAAGTAAAAATATCATCTTGTGGCTGCCATATG  387

seq1  TGTAAGCTTAGATAGGAGGGGAACAGATAAAGACACATGTTTAGATTATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGCTTAGATAGGAGGGGAACAGATAAAGACACATGTTTAGATTATT  437

seq1  GTGAAGAGACACACTAGCTTCCCTAAATCAAAATATTCTCTGTGATGCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAGACACACTAGCTTCCCTAAATCAAAATATTCTCTGTGATGCTT  487

seq1  CTAGTTACAGTATTTTACATTTTTTTAACTGAACAGAAAGTTTCTTATAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTACAGTATTTTACATTTTTTTAACTGAACAGAAAGTTTCTTATAA  537

seq1  AAATTTCTACTGTTTGGTATATTCATTTTAATAGGCTTTTATTTTATTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTACTGTTTGGTATATTCATTTTAATAGGCTTTTATTTTATTTT  587

seq1  ATTTTATTTGCAAATTGGGAGATAATTTTGTGTGTCTGATAAAAACCTCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTGCAAATTGGGAGATAATTTTGTGTGTCTGATAAAAACCTCT  637

seq1  TTTGTTTCTGTTTATTTCACTGTATAAGGAAGCCTTATTAATAAGATCTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTCTGTTTATTTCACTGTATAAGGAAGCCTTATTAATAAGATCTG  687

seq1  CTAGACATTGTAACACCCATGTATAAATCATTTTGATCCATAAGAAGAAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACATTGTAACACCCATGTATAAATCATTTTGATCCATAAGAAGAAG  737

seq1  AAAGGGCTAACTTGGGTTGTAAGTTCATTTAACTAGCTGAGAGAATAGAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGCTAACTTGGGTTGTAAGTTCATTTAACTAGCTGAGAGAATAGAC  787

seq1  GACTGAAGAAAATGGTAGAGTCATCAGGGTTTCTTTGAAAGTGCATTTTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAAGAAAATGGTAGAGTCATCAGGGTTTCTTTGAAAGTGCATTTTC  837

seq1  TTTGCTTGGATTGTAGTCAGAAATTAATTAGGATGAAGTTGTTCATGCAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTGGATTGTAGTCAGAAATTAATTAGGATGAAGTTGTTCATGCAC  887

seq1  ATACACGCATGTGTGTATGCATATAAAATCAAATATGATTATATTTGTGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACGCATGTGTGTATGCATATAAAATCAAATATGATTATATTTGTGT  937

seq1  CTATTACTATGTTTGTAGTATTGTGTTAATGTAAGAATCTGATTGTAAAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTACTATGTTTGTAGTATTGTGTTAATGTAAGAATCTGATTGTAAAT  987

seq1  GCAATCCCCATTAAAATTCCAATAAGACAAAAAGACCACCAACAGATTGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCCCCATTAAAATTCCAATAAGACAAAAAGACCACCAACAGATTGG  1037

seq1  GAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACAT  1087

seq1  ATATAAAGAACACAAGAAGGTGGACTTCAGAAAATCGAATAACCCCATTA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAGAACACAAGAAGGTGGACTTCAGAAAATCGAATAACCCCATTA  1137

seq1  AAAAATGGGGCTCAGAAGTGAACAGAGAATTC  1179
      ||||||||||||||||||||||||||||||||
seq2  AAAAATGGGGCTCAGAAGTGAACAGAGAATTC  1169