BAC Information

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BAC

Clone NameB6Ng01-264H21
Chromosome6 (Build37)
Map Location 119,746,342 - 119,901,017
singlet/doubletdoublet
Overlap geneErc1, LOC666887, Rad52, Wnk1
Upstream geneCacna1c, Dcp1b, Cacna2d4, Lrtm2, Adipor2, Wnt5b, Fbxl14
Downstream geneEG406236, Ninj2, B4galnt3, Ccdc77, Jarid1a, Il17ra, Cecr6, Cecr5, 1700072O05Rik, Cecr2, Slc25a18, Atp6v1e1, Bcl2l13, Bid
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264H21.bB6Ng01-264H21.g
ACCGA068382GA068383
length1,0381,162
definitionB6Ng01-264H21.b B6Ng01-264H21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,899,990 - 119,901,017)(119,746,342 - 119,747,500)
sequence
gaattccacattttcccatagtatttggtcttaaatacatgttctaggca
accatgcattattttgtcatccactttcattctgacaataaattttaatt
catgttctaaaactagcatacccaaccatgattctatgatttagagatgg
cttttgtctaagatgtagctgtgtatatgttcagggtcttataaaggaaa
gtagtattttaaataccaagtacatagtacagctgatgtacagactaaag
tcataaaaataaaatggtaattgaatgacttaaagcttaaaaaagtacta
ataagattgatatcacgtttcttataggtgaacaatgactttattctagc
aatagagagagagtcttttgtggctcaagtgcgggaaattattgaaaagg
ctgatgaaatgttaagtgaggatgtcagtgtggagcctgagggtgaccag
ggattggagagtctgcaaggaaaggatgactatggcttcccaggttctca
ggtaggttcaccatacttttagttagttctgtttatttaaaatagttctg
tactgcttaatctgccaaacagaatatccactgataaaataatgcccttg
tgtctgagaatgaacatttatgttctcatcaaatgacaatatgctttgca
taatcatggaggttgcatttgagaagagttttacttttgcttattgtaga
aattagaaggagagttcaagcaaccaattgctgtatcttccatgccacaa
caaataggtaagcttttcttttttttatttgacaaggagttgtatgtgct
aataacgaactctcaagggtttattcatatataacaatatatatgaattt
caatgatttgttttgttcaggtgttcctaccagttctttaacgcaagttg
ttcattctgctggaagacggtttatagtgagtcctgtaacctgaaagtag
gttacgagaatcaaaagtttttcaaccagtgacattatcagaatccaggg
taagaatgattccagcccatgcctttagtaaatcttac
gaattcttccttaatgctttcttaaaatgtcattgccacagaaagtgagg
tctaatcacacaggccagtttgagtctttcatataaaatcatgtgtctct
acataactccttctggctacacgccttgatttttaacacatatctttcac
aacaagacaaccgtttccagggaaaccagaggagacacccattactgctt
gagtgctgcaggcatgggtgagcagaggtgactggttactagtagtttgt
aattgagcgcctgactctggttttgctgttctgtctctacgaacaaacag
aagcgagtaacaaactgaaacaaccctgtatcccctcagtcactcaggaa
cccctaagaatctcatgcagggtgacaggggtgaggctgttattgagtaa
catatatgccaggtgatgcattctgttcaagaaaaaaaatcaaaaaggaa
atcactgaagtgctgaaacacaagagacaaaattcctatccagcagcaca
gcagagcacataaatttatctagggcaagattctgattagtaagggaaaa
agacaatcaggaactaaaaaggtagtcactcacctctctcaacatattat
tctctttttccttctgctccaaaagactctcgaggtggtggacgtgcatc
tccgcctctgcgagccgtcgcgttctctcatggtcttcctctgtagcttt
ggcagaaagtcctttgctctggagcatctccagaagcttcttgatggact
catcccgagcatttagggtctgcttctgagtctcaatcctcagctccatt
tcctccagggtcttccgcagaagaaacagctctttggcttgcctctcgtg
ctcagcatgcagcctctggaagttctcctctgtgagctctgccacgcaag
gctccccagtccctactgctgctatcttgctgaaacagctgattcaagtc
cctcttggatccgcagctcatcctggagagcctggattgtcatctgcatg
tgctgagaacaacacaaaaagaaaaaccaaaatcagcttccccctcaatt
agccaaagaacagagcagctttgcagcagctaaaaattagctgtaggatc
tcagaaaattatctcagaatagatcctctttattcgctttgaattcaagc
tttttaaaacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_119899990_119901017
seq2: B6Ng01-264H21.b_47_1084 (reverse)

seq1  GTAAGATTTACTAAA-GCAT-GGCT-GAATCATTCTTA-CCTGGA-TCTG  45
      ||||||||||||||| |||| |||| |||||||||||| |||||| ||||
seq2  GTAAGATTTACTAAAGGCATGGGCTGGAATCATTCTTACCCTGGATTCTG  50

seq1  AT-ATGTCACTGGT--GAAAACTTTTGATTCTCGTAACCTACTTTCAGG-  91
      || |||||||||||   |||||||||||||||||||||||||||||||| 
seq2  ATAATGTCACTGGTTGAAAAACTTTTGATTCTCGTAACCTACTTTCAGGT  100

seq1  TACAGGACTCACTATAAACCGTCTTCCAGCAGAATGAACAACTTGCGTTA  141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGACTCACTATAAACCGTCTTCCAGCAGAATGAACAACTTGCGTTA  150

seq1  AAGAACTGGTAGGAACACCTGAACAAAACAAATCATTGAAATTCATATAT  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTGGTAGGAACACCTGAACAAAACAAATCATTGAAATTCATATAT  200

seq1  ATTGTTATATATGAATAAACCCTTGAGAGTTCGTTATTAGCACATACAAC  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTATATATGAATAAACCCTTGAGAGTTCGTTATTAGCACATACAAC  250

seq1  TCCTTGTCAAAT-AAAAAAAGAAAAGCTTACCTATTTGTTGTGGCATGGA  290
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTCAAATAAAAAAAAGAAAAGCTTACCTATTTGTTGTGGCATGGA  300

seq1  AGATACAGCAATTGGTTGCTTGAACTCTCCTTCTAATTTCTACAATAAGC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACAGCAATTGGTTGCTTGAACTCTCCTTCTAATTTCTACAATAAGC  350

seq1  AAAAGTAAAACTCTTCTCAAATGCAACCTCCATGATTATGCAAAGCATAT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAAAACTCTTCTCAAATGCAACCTCCATGATTATGCAAAGCATAT  400

seq1  TGTCATTTGATGAGAACATAAATGTTCATTCTCAGACACAAGGGCATTAT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTGATGAGAACATAAATGTTCATTCTCAGACACAAGGGCATTAT  450

seq1  TTTATCAGTGGATATTCTGTTTGGCAGATTAAGCAGTACAGAACTATTTT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAGTGGATATTCTGTTTGGCAGATTAAGCAGTACAGAACTATTTT  500

seq1  AAATAAACAGAACTAACTAAAAGTATGGTGAACCTACCTGAGAACCTGGG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACAGAACTAACTAAAAGTATGGTGAACCTACCTGAGAACCTGGG  550

seq1  AAGCCATAGTCATCCTTTCCTTGCAGACTCTCCAATCCCTGGTCACCCTC  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATAGTCATCCTTTCCTTGCAGACTCTCCAATCCCTGGTCACCCTC  600

seq1  AGGCTCCACACTGACATCCTCACTTAACATTTCATCAGCCTTTTCAATAA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCCACACTGACATCCTCACTTAACATTTCATCAGCCTTTTCAATAA  650

seq1  TTTCCCGCACTTGAGCCACAAAAGACTCTCTCTCTATTGCTAGAATAAAG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCGCACTTGAGCCACAAAAGACTCTCTCTCTATTGCTAGAATAAAG  700

seq1  TCATTGTTCACCTATAAGAAACGTGATATCAATCTTATTAGTACTTTTTT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTTCACCTATAAGAAACGTGATATCAATCTTATTAGTACTTTTTT  750

seq1  AAGCTTTAAGTCATTCAATTACCATTTTATTTTTATGACTTTAGTCTGTA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTAAGTCATTCAATTACCATTTTATTTTTATGACTTTAGTCTGTA  800

seq1  CATCAGCTGTACTATGTACTTGGTATTTAAAATACTACTTTCCTTTATAA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGCTGTACTATGTACTTGGTATTTAAAATACTACTTTCCTTTATAA  850

seq1  GACCCTGAACATATACACAGCTACATCTTAGACAAAAGCCATCTCTAAAT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGAACATATACACAGCTACATCTTAGACAAAAGCCATCTCTAAAT  900

seq1  CATAGAATCATGGTTGGGTATGCTAGTTTTAGAACATGAATTAAAATTTA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAATCATGGTTGGGTATGCTAGTTTTAGAACATGAATTAAAATTTA  950

seq1  TTGTCAGAATGAAAGTGGATGACAAAATAATGCATGGTTGCCTAGAACAT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGAATGAAAGTGGATGACAAAATAATGCATGGTTGCCTAGAACAT  1000

seq1  GTATTTAAGACCAAATACTATGGGAAAATGTGGAATTC  1028
      ||||||||||||||||||||||||||||||||||||||
seq2  GTATTTAAGACCAAATACTATGGGAAAATGTGGAATTC  1038

seq1: chr6_119746342_119747500
seq2: B6Ng01-264H21.g_67_1228

seq1  GAATTCTTCCTTAATGCTTTCTTAAAATGTCATTGCCACAGAAAGTGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCTTAATGCTTTCTTAAAATGTCATTGCCACAGAAAGTGAGG  50

seq1  TCTAATCACACAGGCCAGTTTGAGTCTTTCATATAAAATCATGTGTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATCACACAGGCCAGTTTGAGTCTTTCATATAAAATCATGTGTCTCT  100

seq1  ACATAACTCCTTCTGGCTACACGCCTTGATTTTTAACACATATCTTTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACTCCTTCTGGCTACACGCCTTGATTTTTAACACATATCTTTCAC  150

seq1  AACAAGACAACCGTTTCCAGGGAAACCAGAGGAGACACCCATTACTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGACAACCGTTTCCAGGGAAACCAGAGGAGACACCCATTACTGCTT  200

seq1  GAGTGCTGCAGGCATGGGTGAGCAGAGGTGACTGGTTACTAGTAGTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTGCAGGCATGGGTGAGCAGAGGTGACTGGTTACTAGTAGTTTGT  250

seq1  AATTGAGCGCCTGACTCTGGTTTTGCTGTTCTGTCTCTACGAACAAACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGCGCCTGACTCTGGTTTTGCTGTTCTGTCTCTACGAACAAACAG  300

seq1  AAGCGAGTAACAAACTGAAACAACCCTGTATCCCCTCAGTCACTCAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGAGTAACAAACTGAAACAACCCTGTATCCCCTCAGTCACTCAGGAA  350

seq1  CCCCTAAGAATCTCATGCAGGGTGACAGGGGTGAGGCTGTTATTGAGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAAGAATCTCATGCAGGGTGACAGGGGTGAGGCTGTTATTGAGTAA  400

seq1  CATATATGCCAGGTGATGCATTCTGTTCAAGAAAAAAAATCAAAAAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATGCCAGGTGATGCATTCTGTTCAAGAAAAAAAATCAAAAAGGAA  450

seq1  ATCACTGAAGTGCTGAAACACAAGAGACAAAATTCCTATCCAGCAGCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGAAGTGCTGAAACACAAGAGACAAAATTCCTATCCAGCAGCACA  500

seq1  GCAGAGCACATAAATTTATCTAGGGCAAGATTCTGATTAGTAAGGGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCACATAAATTTATCTAGGGCAAGATTCTGATTAGTAAGGGAAAA  550

seq1  AGACAATCAGGAACTAAAAAGGTAGTCACTCACCTCTCTCAACATATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATCAGGAACTAAAAAGGTAGTCACTCACCTCTCTCAACATATTAT  600

seq1  TCTCTTTTTCCTTCTGCTCCAAAAGACTCTCGAGGTGGTGGACGTGCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTTCCTTCTGCTCCAAAAGACTCTCGAGGTGGTGGACGTGCATC  650

seq1  TCCGCCTCTGCGAGCCGTCGCGTTCTCTCATGGTCTTCCTCTGTAGCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCCTCTGCGAGCCGTCGCGTTCTCTCATGGTCTTCCTCTGTAGCTTT  700

seq1  GGCAGAAAGTCCTTTGCTCTGGAGCATCTCCAGAAGCTTCTTGATGGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAAAGTCCTTTGCTCTGGAGCATCTCCAGAAGCTTCTTGATGGACT  750

seq1  CATCCCGAGCATTTAGGGTCTGCTTCTGAGTCTCAATCCTCAGCTCCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCGAGCATTTAGGGTCTGCTTCTGAGTCTCAATCCTCAGCTCCATT  800

seq1  TCCTCCAGGGTCTTCCGCAGAAGAAACAGCTCTTTGGCTTGCCTCTCGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCAGGGTCTTCCGCAGAAGAAACAGCTCTTTGGCTTGCCTCTCGTG  850

seq1  CTCAGCATGCAGCCTCTGGAAGTTCTCCTCTGTGAGCTCTGCCACGCAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCATGCAGCCTCTGGAAGTTCTCCTCTGTGAGCTCTGCCACGCAAG  900

seq1  GCTCCCCAGT-CCTACTGCTGCTATCTTGCTGAAACAGCTGATTCAAGTC  949
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCAGTCCCTACTGCTGCTATCTTGCTGAAACAGCTGATTCAAGTC  950

seq1  CCTC-TGGATCCGCAGCTCATCCTGGAGAGCCTGGATTGTCATCTGCATG  998
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTGGATCCGCAGCTCATCCTGGAGAGCCTGGATTGTCATCTGCATG  1000

seq1  TGCTGAGAACAACACAAAAAGAAAAACCAAAATCAGCCTTCCCCTCAATT  1048
      ||||||||||||||||||||||||||||||||||||| | ||||||||||
seq2  TGCTGAGAACAACACAAAAAGAAAAACCAAAATCAGCTTCCCCCTCAATT  1050

seq1  AG-CAAAG-ACAGAGCAGC-TTGCAGGCAGCTAAAAA-TAGCTGTAAGGA  1094
      || ||||| |||||||||| ||||| ||||||||||| ||||||| ||||
seq2  AGCCAAAGAACAGAGCAGCTTTGCA-GCAGCTAAAAATTAGCTGT-AGGA  1098

seq1  TTCTCAGAAA--TATCCTCAGAAATAAAGATTCCTC-TTATTCTCTTTAA  1141
       |||||||||  ||| ||||||   | ||| ||||| |||||| |||| |
seq2  -TCTCAGAAAATTAT-CTCAGA---ATAGA-TCCTCTTTATTCGCTTTGA  1142

seq1  ATTCAAG--TTTTAAAACCA  1159
      |||||||  |||||||||||
seq2  ATTCAAGCTTTTTAAAACCA  1162