BAC Information

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BAC

Clone NameB6Ng01-264N21
Chromosome6 (Build37)
Map Location 22,408,458 - 22,409,645
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnd2, Tspan12, LOC100041358, Ing3, A430107O13Rik, LOC667307, Wnt16, D6Wsu176e, LOC100040948
Downstream geneLOC100040959, LOC668018, LOC668022, Ptprz1, Aass, EG668044, EG546894, EG668053, EG384356, Fezf1, Cadps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264N21.bB6Ng01-264N21.g
ACCGA068664GA068665
length1,1691,178
definitionB6Ng01-264N21.b B6Ng01-264N21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagcaaaggaaacagtgcacacttgccattctctcttagtattg
atgactcaaggagataatgtttttgggtaattcaggatgaagcctcggac
aatggactgaagcacacagaatgaaaaccacaaacaccgtgcctccagat
caagaaaggaatatcttctccattttgttcttaacaatttcatagaaaat
atgttgattcaaatcctgctcagtgttttggaacataactagtgggagga
ggtcggtttaaataacacagtttctagtacccggttctgtctttcaggta
ccagacatgttatagttaataaatctcacatgtaactttaaactattttc
aattgtatttcatgcctcatcttatttttctgagggtaatggaaatgcat
gggtcttaattagtctgacgttgtgtttacacgtttccacagttaggtca
caaactctacttttttttcctttgatggaggacaattactttaagggaca
aagctgaatacttgtaaaatagcaattaaacaattgtcacatttgtgatt
caacctaaaaaagtaagaaagaaagagagagagagagagagagagagaga
gagaaggaaagaaagagagagagaaagaaggaaagagagaaagaagggga
gaaaagcggtaaaaactttgtcttactgtgcaccaaatatttttaaaagt
gtatttgttggttaaatcttcaaagagtctacaaagtagatactgctatt
atccttaatttgcagatgaagaccagacaggagacgaattgccaggtcag
ggatttgggctggcagtgggaccccagagcctcctaatcactgcttggat
ggactcaaagagcccagttgcctgacagaacatgtctaaagagcattagg
actagttaagtgggaatttttgccacagaccctccatctttctttccagt
ggtttgctgtgtgtgaggggcatagaaagccataccctaaatagtgttta
gaaagcccagttactttgaagttaaaggagtctgaaaaccaaaaagctgt
ttctgacaggatgctatgactcgccttttcaacaaccatccgtcactcag
gaatcgctgttctggaagtcgacctatctgcctagctgactgctgaaaag
gaccactgcttcagttctt
gaattccagaagattaagacagggagatctctgagttcaaggtcatctgg
aaataaaggtgtggtggcaccttctgctggagacatacataaggacattg
gaagaaggaaggctctctctctctctccctcaactgcttgccgtgttgga
ctgggcaactgctagatccttggacttccattcacagttgctactgacca
ttgttgggagttagactgcagactgtaagtcatcaacaagttcctttact
atatagagactactcataagttctgtgactctagagaacactgactaata
caataattgagagttttgctgggtatagtagcctgggctggcatttatgt
tcccttagagtctgtatgacatctgtccaggatcttctaactttcatagt
ctctgttaagaagtctggtggaattcttataggtttgcctttatatttta
cttgaccttttccccttactgcttttaaaaatctttctttgtttagtgca
tttagtgttttgattattatatgatgggagaaatttcttttatggtccag
tctatttggacttctgtagatttcttgtatgttcatgggcatctctttct
ttaggtttgggaagttttcttctataattttgttgaagatatttactggc
cctttagtttgggaatctttcttcttctatacctattatccttagctttc
atctcctcattgtgtcctggatttcctggatattttgtgttaggagcttt
ttgctttttgcattttctttgttgtgtcaatgttttctatggtatcttct
gcactcttctatctcttgtactctgttggtgatgcttgcatctatgactc
ctgatctctttcctaggttttctaactccagggttgtctcctttgtgatt
tctttattgtttctgttttcatttttagatcttggatggttttgtttatt
tcctttgcctgttgattgtgtttttctgtatttcttaaggatttttgtgt
ttctctttaagcttctattctgtttacctgtgctttcctgtatttcttta
agaagaagttaattaattgtctttcgttaaagttcttctattccaccaat
catggaagtgatttagatctgatctgcttctgatgtgatggttattcaga
ctgtatatgggggaatactatggggtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_22408458_22409645
seq2: B6Ng01-264N21.b_45_1213

seq1  GAATTCTAGCAAAGGAAACAGTGCACACTTGCCATTCTCTCTTAGTATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGCAAAGGAAACAGTGCACACTTGCCATTCTCTCTTAGTATTG  50

seq1  ATGACTCAAGGAGATAATGTTTTTGGGTAATTCAGGATGAAGCCTCGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCAAGGAGATAATGTTTTTGGGTAATTCAGGATGAAGCCTCGGAC  100

seq1  AATGGACTGAAGCACACAGAATGAAAACCACAAACACCGTGCCTCCAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGACTGAAGCACACAGAATGAAAACCACAAACACCGTGCCTCCAGAT  150

seq1  CAAGAAAGGAATATCTTCTCCATTTTGTTCTTAACAATTTCATAGAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAGGAATATCTTCTCCATTTTGTTCTTAACAATTTCATAGAAAAT  200

seq1  ATGTTGATTCAAATCCTGCTCAGTGTTTTGGAACATAACTAGTGGGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGATTCAAATCCTGCTCAGTGTTTTGGAACATAACTAGTGGGAGGA  250

seq1  GGTCGGTTTAAATAACACAGTTTCTAGTACCCGGTTCTGTCTTTCAGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCGGTTTAAATAACACAGTTTCTAGTACCCGGTTCTGTCTTTCAGGTA  300

seq1  CCAGACATGTTATAGTTAATAAATCTCACATGTAACTTTAAACTATTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACATGTTATAGTTAATAAATCTCACATGTAACTTTAAACTATTTTC  350

seq1  AATTGTATTTCATGCCTCATCTTATTTTTCTGAGGGTAATGGAAATGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTATTTCATGCCTCATCTTATTTTTCTGAGGGTAATGGAAATGCAT  400

seq1  GGGTCTTAATTAGTCTGACGTTGTGTTTACACGTTTCCACAGTTAGGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTAATTAGTCTGACGTTGTGTTTACACGTTTCCACAGTTAGGTCA  450

seq1  CAAACTCTACTTTTTTTTCCTTTGATGGAGGACAATTACTTTAAGGGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCTACTTTTTTTTCCTTTGATGGAGGACAATTACTTTAAGGGACA  500

seq1  AAGCTGAATACTTGTAAAATAGCAATTAAACAATTGTCACATTTGTGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAATACTTGTAAAATAGCAATTAAACAATTGTCACATTTGTGATT  550

seq1  CAACCTAAAAAAGTAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTAAAAAAGTAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGA  600

seq1  GAGAAGGAAAGAAAGAGAGAGAGAAAGAAGGAAAGAGAGAAAGAAGGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGAAAGAAAGAGAGAGAGAAAGAAGGAAAGAGAGAAAGAAGGGGA  650

seq1  GAAAAGCGGTAAAAACTTTGTCTTACTGTGCACCAAATATTTTTAAAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCGGTAAAAACTTTGTCTTACTGTGCACCAAATATTTTTAAAAGT  700

seq1  GTATTTGTTGGTTAAATCTTCAAAGAGTCTACAAAGTAGATACTGCTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGTTGGTTAAATCTTCAAAGAGTCTACAAAGTAGATACTGCTATT  750

seq1  ATCCTTAATTTGCAGATGAAGACCAGACAGGAGACGAATTGCCAGGTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTAATTTGCAGATGAAGACCAGACAGGAGACGAATTGCCAGGTCAG  800

seq1  GGATTTGGGCTGGCAGTGGGACCCCAGAGCCTCCTAATCACTGCTTGGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGGGCTGGCAGTGGGACCCCAGAGCCTCCTAATCACTGCTTGGAT  850

seq1  GGACTCAAAGAGCCCAGTTGCCTGACAGAACATGTCTAAAAGAGCATTAG  900
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGACTCAAAGAGCCCAGTTGCCTGACAGAACATGTCT-AAAGAGCATTAG  899

seq1  GACTAGTTAAGTGGGAATTTTTGCCACAGACCCTCCATC-TTCCTTCCAG  949
      ||||||||||||||||||||||||||||||||||||||| ||| ||||||
seq2  GACTAGTTAAGTGGGAATTTTTGCCACAGACCCTCCATCTTTCTTTCCAG  949

seq1  TGG-TTGCTGTGTGTTGAGGGCATAGAAAGCCATACCCTAAATAGTGTTT  998
      ||| |||||||||||   ||||||||||||||||||||||||||||||||
seq2  TGGTTTGCTGTGTGTGAGGGGCATAGAAAGCCATACCCTAAATAGTGTTT  999

seq1  AAGAAAGCCAAG-TACTTTGAAGTAAAGGAAGTCTGAAAACCAAAAAAGC  1047
       |||||||| || ||||||||||| || | |||||||||||| |||||||
seq2  -AGAAAGCCCAGTTACTTTGAAGTTAAAGGAGTCTGAAAACC-AAAAAGC  1047

seq1  TGTTTCTGAACCAAGATGGCTATGACTTCGCCCTTTTCAACCCACCCATC  1097
      |||||||||  || ||| |||||||| ||| |||||||||  || |||||
seq2  TGTTTCTGA--CAGGAT-GCTATGAC-TCG-CCTTTTCAA--CAACCATC  1090

seq1  CGGTCACTCAGGGAAACGCTTGTTCTTGAAGTCGACTTATCTGCGTAAAG  1147
      | |||||||| |||| ||| |||||| ||||||||| ||||||| ||   
seq2  C-GTCACTCA-GGAATCGC-TGTTCTGGAAGTCGACCTATCTGCCTA---  1134

seq1  GCAGACCTGCTGAAAAAGGGAACAAACTGCCTTCAGTTCTT  1188
      || || ||||||||||  ||| |  |||| |||||||||||
seq2  GCTGA-CTGCTGAAAA--GGACC--ACTG-CTTCAGTTCTT  1169