BAC Information

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BAC

Clone NameB6Ng01-265L04
Chromosome6 (Build37)
Map Location 128,257,521 - 128,380,931
singlet/doubletdoublet
Overlap geneLOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4
Upstream geneEG640703, LOC100043848, Parp11, Efcab4b, Prmt8, Tspan11, Tspan9, LOC100043853, LOC667560, Tead4
Downstream geneEG667598, Pzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265L04.bB6Ng01-265L04.g
ACCGA069280GA069281
length3861,091
definitionB6Ng01-265L04.b B6Ng01-265L04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,380,539 - 128,380,931)(128,257,521 - 128,258,603)
sequence
agcctctgcctcttgctcatcttacaggtgaaggcagaagtggcagcagg
agaccatcccactgatgctgagatgaagggtgagcggaacaatgtggccg
agaaccagtctcgggtggagacagaagcgtagcctgcctcttccgctgcc
cacctctgcagctgctccctgctcccttcttactccaccctgttagtttt
gtaaaaactgaagaattttgagtgaattagacctttatttttctatctgt
ttggatgatggctttgggggagaagggagaagagaaggctgagggtgaaa
tggggggtagttttagatggtgtcaccctacttttcttcccccgttacac
acaagtgtatatcctttcacacgtacatcagaatgt
gaattcaataaatgaaggatctttggaaacactgacatttgaaagcccca
agcttttcacagatttgctcattagccagagtgctcacttctactgctgc
taagccacagcttgtgagtctgaagttttcaaaccatttctccaaaacaa
gggctggcaagatggctgggggtggggtgaaggtgattgccaccaagcct
gatgaccacagatgatcatcttgcctaccctgtagtaggtttattatttc
atccccaaagaagacatagctggaggtttatcttagtgacagaggacttg
cctagcacacacaaagccctgggttccaacacacgcacacgcacacgcaa
aggtgagggtcactctcagcagaaggtacatattagtggtcttggatatg
cctagcttgttcaagaatgtgaataccacccccagaactgaaaataagta
aataaaattaataaactctgggcaaattacctctgtcgcctaatggttaa
attatatcccttccccgtgtttcaaaaagctaacctcctgccaggtgtgg
tggcgcacccctttaatcccagcactcaggaggctgaggcaggcagattt
ctgagttcgaggacagcctggtctacagagtgagttccaggacagccagg
gctacacagagaaaccctgtcttgaaaaaacaaaaacaaacaaacaaaca
aaaagctaacctcccatacctcacaaggtgacagtgtttggaggtaatgt
tcttttaaaaagcaattaaacaccagtcataatgactcatacctgcaatc
tcagtactgggaggctgaggcaggtggattgccatgagattgaggtcagc
gtgggctatataatgaatttcagaccagccttggggctgttaatgagacc
ctgtttcaagagagaaacagcatgggtctggagagatggctcagcagcca
agagcgccttgtttccttctcacagaggaacagaggctgagttcccagcc
tggttgccttacaacctcataaaacttcagttccaggaggaggccatgcc
gccctctttctggctctcttcggttttgcaggcacacagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128380539_128380931
seq2: B6Ng01-265L04.b_46_437 (reverse)

seq1  ACATTCTGATGTACGTGTGAAAGGATATACACTTGTGTGTAACGGGGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTGATGTACGTGTGAAAGGATATACACTTGTGTGTAACGGGGGAA  50

seq1  GAAAAGTAGGGTTGACACCATCTAAAACTACCCCCCATTTCACCCTCAGC  100
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTAGGG-TGACACCATCTAAAACTACCCCCCATTTCACCCTCAGC  99

seq1  CTTCTCTTCTCCCTTCTCCCCCAAAGCCATCATCCAAACAGATAGAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTTCTCCCTTCTCCCCCAAAGCCATCATCCAAACAGATAGAAAAA  149

seq1  TAAAGGTCTAATTCACTCAAAATTCTTCAGTTTTTACAAAACTAACAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTCTAATTCACTCAAAATTCTTCAGTTTTTACAAAACTAACAGGG  199

seq1  TGGAGTAAGAAGGGAGCAGGGAGCAGCTGCAGAGGTGGGCAGCGGAAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTAAGAAGGGAGCAGGGAGCAGCTGCAGAGGTGGGCAGCGGAAGAG  249

seq1  GCAGGCTACGCTTCTGTCTCCACCCGAGACTGGTTCTCGGCCACATTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTACGCTTCTGTCTCCACCCGAGACTGGTTCTCGGCCACATTGTT  299

seq1  CCGCTCACCCTTCATCTCAGCATCAGTGGGATGGTCTCCTGCTGCCACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTCACCCTTCATCTCAGCATCAGTGGGATGGTCTCCTGCTGCCACTT  349

seq1  CTGCCTTCACCTGTAAGATGAGCAAGAGGCAGAGGCTGAATTC  393
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTCACCTGTAAGATGAGCAAGAGGCAGAGGCTGAATTC  392

seq1: chr6_128257521_128258603
seq2: B6Ng01-265L04.g_66_1156

seq1  GAATTCAATAAATGAAGGATCTTTGGAAACACTGACATTTGAAAGCCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAAATGAAGGATCTTTGGAAACACTGACATTTGAAAGCCCCA  50

seq1  AGCTTTTCACAGATTTGCTCATTAGCCAGAGTGCTCACTTCTACTGCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTCACAGATTTGCTCATTAGCCAGAGTGCTCACTTCTACTGCTGC  100

seq1  TAAGCCACAGCTTGTGAGTCTGAAGTTTTCAAACCATTTCTCCAAAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCACAGCTTGTGAGTCTGAAGTTTTCAAACCATTTCTCCAAAACAA  150

seq1  GGGCTGGCAAGATGGCTGGGGGTGGGGTGAAGGTGATTGCCACCAAGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGCAAGATGGCTGGGGGTGGGGTGAAGGTGATTGCCACCAAGCCT  200

seq1  GATGACCACAGATGATCATCTTGCCTACCCTGTAGTAGGTTTATTATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACCACAGATGATCATCTTGCCTACCCTGTAGTAGGTTTATTATTTC  250

seq1  ATCCCCAAAGAAGACATAGCTGGAGGTTTATCTTAGTGACAGAGGACTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCAAAGAAGACATAGCTGGAGGTTTATCTTAGTGACAGAGGACTTG  300

seq1  CCTAGCACACACAAAGCCCTGGGTTCCAACACACGCACACGCACACGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCACACACAAAGCCCTGGGTTCCAACACACGCACACGCACACGCAA  350

seq1  AGGTGAGGGTCACTCTCAGCAGAAGGTACATATTAGTGGTCTTGGATATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGGGTCACTCTCAGCAGAAGGTACATATTAGTGGTCTTGGATATG  400

seq1  CCTAGCTTGTTCAAGAATGTGAATACCACCCCCAGAACTGAAAATAAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTTGTTCAAGAATGTGAATACCACCCCCAGAACTGAAAATAAGTA  450

seq1  AATAAAATTAATAAACTCTGGGCAAATTACCTCTGTCGCCTAATGGTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATTAATAAACTCTGGGCAAATTACCTCTGTCGCCTAATGGTTAA  500

seq1  ATTATATCCCTTCCCCGTGTTTCAAAAAGCTAACCTCCTGCCAGGTGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATCCCTTCCCCGTGTTTCAAAAAGCTAACCTCCTGCCAGGTGTGG  550

seq1  TGGCGCACCCCTTTAATCCCAGCACTCAGGAGGCTGAGGCAGGCAGATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGCACCCCTTTAATCCCAGCACTCAGGAGGCTGAGGCAGGCAGATTT  600

seq1  CTGAGTTCGAGGACAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTCGAGGACAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGG  650

seq1  GCTACACAGAGAAACCCTGTCTTGAAAAAACAAAAACAAACAAACAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACACAGAGAAACCCTGTCTTGAAAAAACAAAAACAAACAAACAAACA  700

seq1  AAAAGCTAACCTCCCATACCTCACAAGGTGACAGTGTTTGGAGGTAATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTAACCTCCCATACCTCACAAGGTGACAGTGTTTGGAGGTAATGT  750

seq1  TCTTTTAAAAAGCAATTAAACACCAGTCATAATGACTCATACCTGCAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAAAAAGCAATTAAACACCAGTCATAATGACTCATACCTGCAATC  800

seq1  TCAGTACT-GGAGGCTGAGGCAGGTGGATTGCCATGAGATTGAGGTCAGC  849
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTACTGGGAGGCTGAGGCAGGTGGATTGCCATGAGATTGAGGTCAGC  850

seq1  GTGGGCTATATAATGAATTTCAGACCAGCCT--GGGCTGTTAATGAGACC  897
      |||||||||||||||||||||||||||||||  |||||||||||||||||
seq2  GTGGGCTATATAATGAATTTCAGACCAGCCTTGGGGCTGTTAATGAGACC  900

seq1  CTGTTTCAAAGAGAGAAACAGCAT-GGTCTGGAGAGATGGCTCAGCAGCC  946
      ||||||| |||||||||||||||| |||||||||||||||||||||||||
seq2  CTGTTTC-AAGAGAGAAACAGCATGGGTCTGGAGAGATGGCTCAGCAGCC  949

seq1  AAGAGCG-CTTGTT--CCTCTCACAGAGG-ACAGAGGCTGAGTTCCCAGC  992
      ||||||| ||||||  | ||||||||||| ||||||||||||||||||||
seq2  AAGAGCGCCTTGTTTCCTTCTCACAGAGGAACAGAGGCTGAGTTCCCAGC  999

seq1  CTGG-TGCCTTACAACCTCATAAAACTTCAGTTCCAGGAAGGAGGCCCAT  1041
      |||| ||||||||||||||||||||||||||||||||| |||||| ||||
seq2  CTGGTTGCCTTACAACCTCATAAAACTTCAGTTCCAGG-AGGAGG-CCAT  1047

seq1  G-CGCCCTC-TTCTGGCTCTCTTCGGTATTGCAGGCACACAGTG  1083
      | ||||||| ||||||||||||||||| ||||||||||||||||
seq2  GCCGCCCTCTTTCTGGCTCTCTTCGGTTTTGCAGGCACACAGTG  1091