BAC Information

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BAC

Clone NameB6Ng01-266A18
Chromosome6 (Build37)
Map Location 81,742,634 - 81,743,751
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042991
Downstream geneLOC232143, 1700009C05Rik, AW146020, Mrpl19, Tmem166, EG622198, Tacr1, Pole4, LOC100043412, Hk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266A18.bB6Ng01-266A18.g
ACCGA069541GA069542
length1,1181,161
definitionB6Ng01-266A18.b B6Ng01-266A18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggcaactgagagaaactgttacagaaaccaaggtggaatgtg
agggtaatatactaccacaatacaatatgtacatgtatgataatgtcata
atgaaatctattgctctgcatattatgtatattgttattaatatatgcta
ataaataatatgtgctaatctaaatggtgactgaggaatgacaccaaagg
ttgcctctgacctctaaatgagtgtgcacacatgtatacacacacacaca
cacacagagctatttgagagtcctgtttgggctgagccccacctctgcat
taggagcaccaccggaggtctctgagcagcaggattagcccaaactagta
gttgcaaagtactgatggttgcagataatgatgcaatcaatcagcagata
tctggtacatgagactgttcacagcaatacatgtgtgatattgtttttcc
cctgaataaaataacctcattgcattaaaaattatcactatagacctgct
ttgaagcacatatgagtagtggaaatacacattttcttttgtgactttat
aataaataataataaagtacaacttcaaagaaagctgatatttcagggta
ggggagttctgaaaatttctcaccaagtccccaagctaactttctttctc
tgaaagaagtgcaaacttgaaatctaaagactttagaacttcagggctca
tgtgtcatgtgactgttcctcgcccccttattttactctgcgcacgatat
tctttaagtcctcgttttttaaggacccatgcatattttatgaattgagc
ctaaatgtctcatcatcacacatcccagagactctctgcccagaaactga
tcattagcgggttcattttgtatgctagtggttgtcaaaggccgttctga
agtgttacattgagttttgacattaatttgatgaacacttaagctcatca
ataactctgctgagattcggagcagcagaaattagaaagatgaatctcag
gagatgattccattgaaaaggatgtgactcgcagtcattactgctcaatg
cctgggacttcgtgacagccacacagaatgcagttaaaggctcccaagct
ggtgtcagctgaatgctc

gaattcagtagttgttgagtccatgaggctgaatgtctcaagctggtctt
tagtattagctggactcctgaagaaggaggtttcaatgccagtgaaaaaa
tggatttgctagggaaagtaagagcaaggaggcaaagatagcaaacttcc
ttctccaatgtcctttctatatgctctcagccgaaggtgtgatacaaatt
aaaggtggatcttcccacctcaagagatctgtattaaaggtgtatgggtc
ttctcagttcaaatgatttaatttagaagtagtttctcacaggtgtacct
agtcacatgggctttagttaattccagatatagtcaagttgacaaccaag
aatagcaatcacaacctctaactaaggaagtgaaagacctgtataataaa
aacttaacgacattgaagaaggcattagaagttggaagatcactcatgct
cacacattagtaggattgtcttgaaaaaccaaaaaaaaaaaaaaaaaaaa
aagattgtgaaaatggctatccaaaaacaatctacaggatcagtacaatc
ccaatcaaaatgccaacactattccttacagaaattggagatatcacact
cccagattgatttgaatcggttctacagagagctatgatactgaaacagg
atgggattggtgtaaggacaaatacactaatcagtgaaacaaaacaaaaa
acctagacataacttcatactgacagacacatgattttgacaaagaagca
aacaaaacaagacaaaggaaaaaagaaccactggagagaagacatcatct
tcaacttcctggccatactaaatacctgcatctagaagaatgaaaatata
tccacatctatcatcctgagcaaaacaactccagatggatcaagatctga
aacttaagaccatatactgtgatgtgatagaaaagatagtaaggaatagg
cttgaactcattggcacaggagactttctgaatgggaccttggtggaggc
aggtataggattacatgagtaatgggaactctgagacggaaaatttctgt
acagcaaggaaacatcatttggagtgagaggcagccttacaataggtagg
actgaaggctaagctactcactggcctgctcacttaaacctacataatct
acacctatact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_81742634_81743751
seq2: B6Ng01-266A18.b_48_1165

seq1  GAATTCCAGGCAACTGAGAGAAACTGTTACAGAAACCAAGGTGGAATGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCAACTGAGAGAAACTGTTACAGAAACCAAGGTGGAATGTG  50

seq1  AGGGTAATATACTACCACAATACAATATGTACATGTATGATAATGTCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAATATACTACCACAATACAATATGTACATGTATGATAATGTCATA  100

seq1  ATGAAATCTATTGCTCTGCATATTATGTATATTGTTATTAATATATGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATCTATTGCTCTGCATATTATGTATATTGTTATTAATATATGCTA  150

seq1  ATAAATAATATGTGCTAATCTAAATGGTGACTGAGGAATGACACCAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAATATGTGCTAATCTAAATGGTGACTGAGGAATGACACCAAAGG  200

seq1  TTGCCTCTGACCTCTAAATGAGTGTGCACACATGTATACACACACACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCTGACCTCTAAATGAGTGTGCACACATGTATACACACACACACA  250

seq1  CACACAGAGCTATTTGAGAGTCCTGTTTGGGCTGAGCCCCACCTCTGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGAGCTATTTGAGAGTCCTGTTTGGGCTGAGCCCCACCTCTGCAT  300

seq1  TAGGAGCACCACCGGAGGTCTCTGAGCAGCAGGATTAGCCCAAACTAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGCACCACCGGAGGTCTCTGAGCAGCAGGATTAGCCCAAACTAGTA  350

seq1  GTTGCAAAGTACTGATGGTTGCAGATAATGATGCAATCAATCAGCAGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAAAGTACTGATGGTTGCAGATAATGATGCAATCAATCAGCAGATA  400

seq1  TCTGGTACATGAGACTGTTCACAGCAATACATGTGTGATATTGTTTTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTACATGAGACTGTTCACAGCAATACATGTGTGATATTGTTTTTCC  450

seq1  CCTGAATAAAATAACCTCATTGCATTAAAAATTATCACTATAGACCTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATAAAATAACCTCATTGCATTAAAAATTATCACTATAGACCTGCT  500

seq1  TTGAAGCACATATGAGTAGTGGAAATACACATTTTCTTTTGTGACTTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGCACATATGAGTAGTGGAAATACACATTTTCTTTTGTGACTTTAT  550

seq1  AATAAATAATAATAAAGTACAACTTCAAAGAAAGCTGATATTTCAGGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAATAATAAAGTACAACTTCAAAGAAAGCTGATATTTCAGGGTA  600

seq1  GGGGAGTTCTGAAAATTTCTCACCAAGTCCCCAAGCTAACTTTCTTTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGTTCTGAAAATTTCTCACCAAGTCCCCAAGCTAACTTTCTTTCTC  650

seq1  TGAAAGAAGTGCAAACTTGAAATCTAAAGACTTTAGAACTTCAGGGCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAAGTGCAAACTTGAAATCTAAAGACTTTAGAACTTCAGGGCTCA  700

seq1  TGTGTCATGTGACTGTTCCTCGCCCCCTTATTTTACTCTGCGCACGATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCATGTGACTGTTCCTCGCCCCCTTATTTTACTCTGCGCACGATAT  750

seq1  TCTTTAAGTCCTCGTTTTTTAAGGACCCATGCATATTTTATGAATTGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAGTCCTCGTTTTTTAAGGACCCATGCATATTTTATGAATTGAGC  800

seq1  CTAAATGTCTCATCATCACACATCCCAGAGACTCTCTGCCCAGAAACTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGTCTCATCATCACACATCCCAGAGACTCTCTGCCCAGAAACTGA  850

seq1  TCATTAGCGGGTTCATTTTGTATGCTAGTGGTTGTCAAAGGCCGTTCTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAGCGGGTTCATTTTGTATGCTAGTGGTTGTCAAAGGCCGTTCTGA  900

seq1  AGGTGTTACATTGAGTTTTGACATTAA-TTGATGAACACTTAAGCTCATC  949
      | ||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  A-GTGTTACATTGAGTTTTGACATTAATTTGATGAACACTTAAGCTCATC  949

seq1  -ATAACTCTGCTGAGATTCGGAGCAGCAGAAATTAGAAAGATGAATCTCA  998
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTCTGCTGAGATTCGGAGCAGCAGAAATTAGAAAGATGAATCTCA  999

seq1  GGAGATGAATCCATTGAAAAGGAATGTGACTCCGCAGTCATTACTGCTCA  1048
      |||||||| ||||||||||||| |||||||| ||||||||||||||||||
seq2  GGAGATGATTCCATTGAAAAGG-ATGTGACT-CGCAGTCATTACTGCTCA  1047

seq1  ATGCCTGGGACTTCGTGACAGCCACACAGAATGCAG-TAAAGGCTCCC-A  1096
      |||||||||||||||||||||||||||||||||||| ||||||||||| |
seq2  ATGCCTGGGACTTCGTGACAGCCACACAGAATGCAGTTAAAGGCTCCCAA  1097

seq1  GCTGGTGTCAGGCTGAAGGCTC  1118
      |||||||||| |||||| ||||
seq2  GCTGGTGTCA-GCTGAATGCTC  1118


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