BAC Information

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BAC

Clone NameB6Ng01-268A14
Chromosome6 (Build37)
Map Location 75,416,386 - 75,538,548
singlet/doubletdoublet
Overlap genenone
Upstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143
Downstream geneEG668145, EG546907, LOC100042952, LOC668153, EG668155
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268A14.bB6Ng01-268A14.g
ACCGA071005GA071006
length1,1831,051
definitionB6Ng01-268A14.b B6Ng01-268A14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,416,386 - 75,417,102)(75,537,466 - 75,538,548)
sequence
gaattcctaaaattttcatttctagtttttgctgagttcgggttctctgt
attgattttatttaaacatttagaatttggattgtttaattaattttatt
ccattgtgttgagtgttttcatatatttaagtgatttattcctttcttct
ttaagtaacagtatcacattcataaaggcgattttaaagtccttgtctta
agcttctgctatgtttcgattctctgcactgactctggtaaggttgttgg
actataatgaaaacacattctcttggttaatactaagtgtgtttttatgc
tgacatctggacatcttggttagtgaatactgtaattctggatactgatg
tctgctcttttctcttttggatgggtgttttgtccctttgtttctgatac
cttccctgcttcttaggaaagtttggtggctgtgtgttgcctggtaagaa
atttttctgggatatcccttggtgctagcactggggcttccaggtaaaat
gcattttaggtattgggaactgacatttagagagagatgggataaggagg
atgttggtgatccatgggaagacagaattccaggtgtttaactagaattt
tcttagtcccctgtgaatgaggcagaaattaaggagaggccacaacaggt
ggtttgatggaaaacagggaatgaacctggggatttgacttagaagaatg
gaagtattacctgtagttagcttcccagcttccctggttagttttatctg
aaggtgcctgctgagataaaggggtgcacactgaggagaaatgtcaaagg
gaaagatttgtatgatccaccagagaagaagacaggagttatggcagggc
acttcatgtggtcagctacagaacttgaagtaagactacggattgcagga
ttggatttcgagggacagaaagagaggtaaagttttcatctaccttatct
gcctttctggccacatcatagttatgagatagaaattagtaagcattgta
ttagtccatggtatcagaatttgacttggagaagtaaatttataacctca
catatcagccttcagggaacaaaatgtctatatgaacatggagtctgaag
aataaccctcttttggtttccttggtgccattgttttgttttgaaatccg
gaatcatccaatcatgggtgagagtgaacagaa
gaattccaggatagccagggctttacagagaaaccctgtctcaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaa
aaaagaaaaaaaaagaaaatagaaatagcagggaaagttttaggggtatt
ttaaagataacttaattaaaatgacagaaaaaattattttcatctctttt
gcttgatgctttgtgttgaacagtcaccaagttttcaacaatgatttttg
gaaactcacagaatataaaatatacattggcaatgtacagcacaacattt
ttattatagcatggtaatagtttggaaaatgagtaaagccatgttctttt
gtcatcttcccaaactcatatgagacaaaaagaaagagaaactgaaaaga
gttcaggagtttatgtctggctgggagattggattttggtttaatagcac
catggaagccatcgcaagataattaaaatgagtcccaaagcttgaatgtt
gtctctctttatgtaatacgttctacgaagtagtggcatttggcatacaa
aagagaaaaatgaaaaagagaggtccactatgcttaacattgagagaggt
agaaatatgtctattaacattattaagaagagtcccagtcacaaaatgaa
tcacacaagtcatttccatcaaaccatctccacattgatggaaagatgtg
agaaaaaaatcatctgaccttgtcctcaccaggactggaagaaataacgt
agaaaggaaatcttgctgtacattttatctttttaactatcctcattacc
tgaatctcatttcctttgggttcatgaagctacattaaggacctctgtgc
attccacagtattttcttcatgattaatgattacttttaattagccatgt
atatttgtagtgactttcctgaccttttactgcatgatcatcatataaca
cacatttgttgtcatatgttgatagtttttatttctttatgaattatgta
tttcatgtgtgagattcttcacagtctcatctactcaaccagtactgcac
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_75416386_75417102
seq2: B6Ng01-268A14.b_511_1228

seq1  CCCTTGGTGCTAGCACTGGGGCTTCCAGGTAAAATGCATTTTAGGTATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGTGCTAGCACTGGGGCTTCCAGGTAAAATGCATTTTAGGTATTG  50

seq1  GGAACTGACATTTAGAGAGAGATGGGATAAGGAGGATGTTGGTGATCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGACATTTAGAGAGAGATGGGATAAGGAGGATGTTGGTGATCCAT  100

seq1  GGGAAGACAGAATTCCAGGTGTTTAACTAGAATTTTCTTAGTCCCCTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGACAGAATTCCAGGTGTTTAACTAGAATTTTCTTAGTCCCCTGTG  150

seq1  AATGAGGCAGAAATTAAGGAGAGGCCACAACAGGTGGTTTGATGGAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGCAGAAATTAAGGAGAGGCCACAACAGGTGGTTTGATGGAAAAC  200

seq1  AGGGAATGAACCTGGGGATTTGACTTAGAAGAATGGAAGTATTACCTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAATGAACCTGGGGATTTGACTTAGAAGAATGGAAGTATTACCTGTA  250

seq1  GTTAGCTTCCCAGCTTCCCTGGTTAGTTTTATCTGAAGGTGCCTGCTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCTTCCCAGCTTCCCTGGTTAGTTTTATCTGAAGGTGCCTGCTGAG  300

seq1  ATAAAGGGGTGCACACTGAGGAGAAATGTCAAAGGGAAAGATTTGTATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGGGTGCACACTGAGGAGAAATGTCAAAGGGAAAGATTTGTATGA  350

seq1  TCCACCAGAGAAGAAGACAGGAGTTATGGCAGGGCACTTCATGTGGTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCAGAGAAGAAGACAGGAGTTATGGCAGGGCACTTCATGTGGTCAG  400

seq1  CTACAGAACTTGAAGTAAGACTACGGATTGCAGGATTGGATTTCGAGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGAACTTGAAGTAAGACTACGGATTGCAGGATTGGATTTCGAGGGA  450

seq1  CAGAAGGAGAGGTAAAGTTTTCATCTACCTTATCTGCCTTTCTGGCCACA  500
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAGAGGTAAAGTTTTCATCTACCTTATCTGCCTTTCTGGCCACA  500

seq1  TCATAGTTATGAGATAGAAATTAGTAAGCATTGTATTAGTCCATGGTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTTATGAGATAGAAATTAGTAAGCATTGTATTAGTCCATGGTATC  550

seq1  AGAA-TTGACTTGGAGAAGGTAAATTTATAAACTCACATATCAGCC-TCA  598
      |||| ||||||||||||| |||||||||||| |||||||||||||| |||
seq2  AGAATTTGACTTGGAGAA-GTAAATTTATAACCTCACATATCAGCCTTCA  599

seq1  GGGACAAAAATGTTCTAATATGAACAATGGAGTCTGAAGAATAAACCTCT  648
      ||||  |||||| ||| |||||||| |||||||||||||||||| |||||
seq2  GGGAACAAAATG-TCT-ATATGAAC-ATGGAGTCTGAAGAATAACCCTCT  646

seq1  TTT-GTTTCCTT-GTG-CATTGTTTTGTTTTAAAATCAGATTCCATCATA  695
      ||| |||||||| ||| |||||||||||||| ||||| |    ||||  |
seq2  TTTGGTTTCCTTGGTGCCATTGTTTTGTTTTGAAATCCGGAATCATCCAA  696

seq1  TCAATGGGT-AGAGTGAACAGAA  717
      || |||||| |||||||||||||
seq2  TC-ATGGGTGAGAGTGAACAGAA  718

seq1: chr6_75537466_75538548
seq2: B6Ng01-268A14.g_70_1120 (reverse)

seq1  TGTGCAGTACTTGGGTTGAGTAGGATGAAGAACTTGTAGAAGAAATTTCT  50
      |||||||||||  ||||||||| |||| |||   ||| ||||||   |||
seq2  TGTGCAGTACT--GGTTGAGTA-GATG-AGA--CTGT-GAAGAA---TCT  40

seq1  CAACCACATGAAATACATAATTTCATAAAGGAAAATAAAAACTTATTCAA  100
      ||  |||||||||||||||| |||||||||  |||||||||| |||   |
seq2  CA--CACATGAAATACATAA-TTCATAAAG--AAATAAAAAC-TAT--CA  82

seq1  ACATATTGACCAACAAATGTGTGTTATTATTGATGATTCATGCAGTAAAA  150
      ||||| ||| |||||||||||||||||   |||||| ||||||||| |||
seq2  ACATA-TGA-CAACAAATGTGTGTTAT--ATGATGA-TCATGCAGT-AAA  126

seq1  AGGTCAGGAAAAGTCAACTACAAATATTAACATGGCTTAATTAAAAGTAA  200
      |||||||| |||||| |||||||||||  ||||||| |||||||||||||
seq2  AGGTCAGG-AAAGTC-ACTACAAATAT--ACATGGC-TAATTAAAAGTAA  171

seq1  TCATTAATTCATGAAG-AAATACTGTGGAATGCACAGAGGTTCCTTTAAT  249
      ||||||| |||||||| ||||||||||||||||||||||||  | |||||
seq2  TCATTAA-TCATGAAGAAAATACTGTGGAATGCACAGAGGT--CCTTAAT  218

seq1  GTAGCTTTCATGAACCCAAAGGAAATGAGATTCAGGTAATGAGGATAGTT  299
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGC-TTCATGAACCCAAAGGAAATGAGATTCAGGTAATGAGGATAGTT  267

seq1  AAAAAGATAAAATGTACAGCAAGATTTCCTTTCTACGTTATTTCTTCCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGATAAAATGTACAGCAAGATTTCCTTTCTACGTTATTTCTTCCAG  317

seq1  TCCTGGTGAGGACAAGGTCAGATGATTTTTTTCTCACATCTTTCCATCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGTGAGGACAAGGTCAGATGATTTTTTTCTCACATCTTTCCATCAA  367

seq1  TGTGGAGATGGTTTGATGGAAATGACTTGTGTGATTCATTTTGTGACTGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGATGGTTTGATGGAAATGACTTGTGTGATTCATTTTGTGACTGG  417

seq1  GACTCTTCTTAATAATGTTAATAGACATATTTCTACCTCTCTCAATGTTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTTCTTAATAATGTTAATAGACATATTTCTACCTCTCTCAATGTTA  467

seq1  AGCATAGTGGACCTCTCTTTTTCATTTTTCTCTTTTGTATGCCAAATGCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGTGGACCTCTCTTTTTCATTTTTCTCTTTTGTATGCCAAATGCC  517

seq1  ACTACTTCGTAGAACGTATTACATAAAGAGAGACAACATTCAAGCTTTGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTCGTAGAACGTATTACATAAAGAGAGACAACATTCAAGCTTTGG  567

seq1  GACTCATTTTAATTATCTTGCGATGGCTTCCATGGTGCTATTAAACCAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCATTTTAATTATCTTGCGATGGCTTCCATGGTGCTATTAAACCAAA  617

seq1  ATCCAATCTCCCAGCCAGACATAAACTCCTGAACTCTTTTCAGTTTCTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAATCTCCCAGCCAGACATAAACTCCTGAACTCTTTTCAGTTTCTCT  667

seq1  TTCTTTTTGTCTCATATGAGTTTGGGAAGATGACAAAAGAACATGGCTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTGTCTCATATGAGTTTGGGAAGATGACAAAAGAACATGGCTTT  717

seq1  ACTCATCTTCCAAACTATTACCATGCTATAATAAAAATGTTGTGCTGTAC  799
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTTTCCAAACTATTACCATGCTATAATAAAAATGTTGTGCTGTAC  767

seq1  ATTGCCAATGTATATTTTATATTCTGTGAGTTTCCAAAAATCATTGTTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCAATGTATATTTTATATTCTGTGAGTTTCCAAAAATCATTGTTGA  817

seq1  AAACTTGGTGACTGTTCAACACAAAGCATCAAGCAAAAGAGATGAAAATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGGTGACTGTTCAACACAAAGCATCAAGCAAAAGAGATGAAAATA  867

seq1  ATTTTTTCTGTCATCTTAATTAAGTTATCTTTAATATACCCCTAAAACTT  949
      |||||||||||||| ||||||||||||||||||| |||||||||||||||
seq2  ATTTTTTCTGTCATTTTAATTAAGTTATCTTTAAAATACCCCTAAAACTT  917

seq1  TCCTTGCTATTTCTATTTTCTTTTTTTTTCTTTTTTCTTTTTTTTTTTTT  999
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCTATTTCTATTTTCTTTTTTTTTCTTTTTTCTTTTTTTTTTTTT  967

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGG  1017

seq1  GTTTCTCTGTAAAGCCCTGGCTATCCTGGAATTC  1083
      ||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTGTAAAGCCCTGGCTATCCTGGAATTC  1051