BAC Information

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BAC

Clone NameB6Ng01-268O03
Chromosome6 (Build37)
Map Location 36,343,886 - 36,345,024
singlet/doubletsinglet
Overlap genenone
Upstream geneMtpn, LOC100039312, LOC100039327, 9330158H04Rik
Downstream geneChrm2, EG620863, LOC100039370, Ptn, LOC100039514, Dgki, EG665024, Creb3l2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268O03.bB6Ng01-268O03.g
ACCGA071627GA071628
length7141,139
definitionB6Ng01-268O03.b B6Ng01-268O03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgccttgctcttttcctgaaccacttcaaggctgattggtatg
aatgaagcttgctaaataagtctattttcctggctataataatacaaata
atatttaatctcttttcttttattttttagaatacccaagatacaagata
caatctgcaaaacacatgaaactcaacaagaatgaagaccaaagtgtgga
ccctttgccccttcttagaattgggaacaaaacacccatggaaggagtta
cacagacaaagtttggagctgagacgaaaaggtggaccatctagagactg
ccatacccggggatccatcccataatcagcctccaaacgctgacaccatt
gcatacactagcaagattttgctgaaaggaatcagatatagctgtctctt
gtgagactatgccagggcctagcaaacacagaagtggatgctcacagtca
gctattgaatggatcacagggtccccaatggaggagctagagaaattacc
caaggaaataacggtgtctgcaatcctataggtggaacaacaatatgaac
taaccagtacccctgagctcttgactctagctgcatatgtatcaaaagat
ggcctagtcggccatcattggaaagagaggcccattggtcttgcaaactt
tatatacctcagtacagggaatgccagggccaagaagtaggagtcggtgg
ggaggggagtgggt

gaattctttccccctcaacccttctccctccagccaagcttacacctaat
gatgccctctggtgttcagagacagaaagtgcactggtttgtttatgagg
cgctcatcattgtttaaagcttaggagacactttaatttcaattcgaaaa
taaaaatgactcagataaggattaattaacatagtttaaacaatgatata
ataaaaaagatttttctgttttctaagtatgttaaaggatgtctactgtg
cagagatctagaaagttctatgtatgtatgtaagtatttagacctataca
cccttttgcacttaatatgattgcgaaatgttttttatgagaggcagaga
aacttccaagaggagaatctagtagaatattctgtatgctttgatctgcg
gatttaaaagaaaatgaagtcttctgacttaatggggagacttccttgct
ggaaatgtctagacgttttactcttcgtctgcattaatgagcacattttt
attagtcactcataacccaacaaactgacacaaaactgatgtgctaagaa
caccttatctttctcactccaaattctacagcttcttctacgtaagtggc
aaagcaggccagtgctctctttggggcttctccagaacttctccccaaat
ctcccttgccagggggttttattatgatgtattgagctggtcctccactc
ttcagctttctgtactacacctccttctttcattccaagacatccttttc
ataatgcaaaactgaacttctatgttatcgacatgtaatagtactctttt
taaaaattctccagtgtttctcaagtggttgtaataaactcttccaacac
tgatgcagtgagactgtccagcactgatgcagtgagactgcccattacaa
atgcagtgagactgcccatcacagatgcagtgagactgcccatcactgat
tcagagactgcccattacaaatgcagtgagactgcccatcacagatgcag
tgagactgtcatcactgatcagaagactgcccatcactgatgcagtgaga
ctgtcatcactgaatgcagtgagactggtcatcactgatgcactgaaact
gttcatccactgattgcagtggaactgtccaatcacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_36343886_36345024
seq2: B6Ng01-268O03.g_66_1204

seq1  GAATTCTTTCCCCCTCAACCCTTCTCCCTCCAGCCAAGCTTACACCTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCCCCTCAACCCTTCTCCCTCCAGCCAAGCTTACACCTAAT  50

seq1  GATGCCCTCTGGTGTTCAGAGACAGAAAGTGCACTGGTTTGTTTATGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCCTCTGGTGTTCAGAGACAGAAAGTGCACTGGTTTGTTTATGAGG  100

seq1  CGCTCATCATTGTTTAAAGCTTAGGAGACACTTTAATTTCAATTCGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCATCATTGTTTAAAGCTTAGGAGACACTTTAATTTCAATTCGAAAA  150

seq1  TAAAAATGACTCAGATAAGGATTAATTAACATAGTTTAAACAATGATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGACTCAGATAAGGATTAATTAACATAGTTTAAACAATGATATA  200

seq1  ATAAAAAAGATTTTTCTGTTTTCTAAGTATGTTAAAGGATGTCTACTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAGATTTTTCTGTTTTCTAAGTATGTTAAAGGATGTCTACTGTG  250

seq1  CAGAGATCTAGAAAGTTCTATGTATGTATGTAAGTATTTAGACCTATACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATCTAGAAAGTTCTATGTATGTATGTAAGTATTTAGACCTATACA  300

seq1  CCCTTTTGCACTTAATATGATTGCGAAATGTTTTTTATGAGAGGCAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTGCACTTAATATGATTGCGAAATGTTTTTTATGAGAGGCAGAGA  350

seq1  AACTTCCAAGAGGAGAATCTAGTAGAATATTCTGTATGCTTTGATCTGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCAAGAGGAGAATCTAGTAGAATATTCTGTATGCTTTGATCTGCG  400

seq1  GATTTAAAAGAAAATGAAGTCTTCTGACTTAATGGGGAGACTTCCTTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAAAAGAAAATGAAGTCTTCTGACTTAATGGGGAGACTTCCTTGCT  450

seq1  GGAAATGTCTAGACGTTTTACTCTTCGTCTGCATTAATGAGCACATTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGTCTAGACGTTTTACTCTTCGTCTGCATTAATGAGCACATTTTT  500

seq1  ATTAGTCACTCATAACCCAACAAACTGACACAAAACTGATGTGCTAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTCACTCATAACCCAACAAACTGACACAAAACTGATGTGCTAAGAA  550

seq1  CACCTTATCTTTCTCACTCCAAATTCTACAGCTTCTTCTACGTAAGTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTATCTTTCTCACTCCAAATTCTACAGCTTCTTCTACGTAAGTGGC  600

seq1  AAAGCAGGCCAGTGCTCTCTTTGGGGCTTCTCCAGAACTTCTCCCCAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGGCCAGTGCTCTCTTTGGGGCTTCTCCAGAACTTCTCCCCAAAT  650

seq1  CTCCCTTGCCAGGGGGTTTTATTATGATGTATTGAGCTGGTCCTCCACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTGCCAGGGGGTTTTATTATGATGTATTGAGCTGGTCCTCCACTC  700

seq1  TTCAGCTTTCTGTACTACACCTCCTTCTTTCATTCCAAGACATCCTTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTTTCTGTACTACACCTCCTTCTTTCATTCCAAGACATCCTTTTC  750

seq1  ATAATGCAAAACTGAACTTCTATGTTATCGACATGTAATAGTACTCTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCAAAACTGAACTTCTATGTTATCGACATGTAATAGTACTCTTTT  800

seq1  TAAAAATTCTCCAGTGTTTCTCAAGTGGTTGTAATAAACTCTTCCAACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTCTCCAGTGTTTCTCAAGTGGTTGTAATAAACTCTTCCAACAC  850

seq1  TGATGCAGTGAGACTGTCCAGCACTGATGCAGTGAGACTGCCCATTACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCAGTGAGACTGTCCAGCACTGATGCAGTGAGACTGCCCATTACAA  900

seq1  ATGCAGTGAGACTGCCCATCACAGATGCAGTGAGACTGCCCATCACTGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTGAGACTGCCCATCACAGATGCAGTGAGACTGCCCATCACTGAT  950

seq1  TCAGGAGACTGCCCATTACAAATGCAGTGAGACTGCCCATCACAGATGCA  1000
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCA-GAGACTGCCCATTACAAATGCAGTGAGACTGCCCATCACAGATGCA  999

seq1  GTGAGACTGTCCATCACTGATTCAGGAGACTGCCCATCACTGATGCAGTG  1050
      |||||||||| ||||||||| |||| ||||||||||||||||||||||||
seq2  GTGAGACTGT-CATCACTGA-TCAGAAGACTGCCCATCACTGATGCAGTG  1047

seq1  AGACTGTCCATCACTG-ATGCAGTGAGACTGTCCATCACTGATGCACTGA  1099
      ||||||| |||||||| ||||||||||||||  |||||||||||||||||
seq2  AGACTGT-CATCACTGAATGCAGTGAGACTGGTCATCACTGATGCACTGA  1096

seq1  GACTGTCCAT-CACTGA-TGCAGTGAGACTGTCC-ATCACAGA  1139
       ||||| ||| |||||| |||||||  ||||||| |||||| |
seq2  AACTGTTCATCCACTGATTGCAGTGGAACTGTCCAATCACACA  1139


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