BAC Information

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BAC

Clone NameB6Ng01-269J08
Chromosome6 (Build37)
Map Location 130,072,867 - 130,219,862
singlet/doubletdoublet
Overlap geneLOC100038894, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10
Upstream geneClec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038895, Klra4, LOC667769
Downstream geneKlra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558, LOC625566, EG636947, LOC625628, EG625648, LOC667830, EG434094, Klra2, LOC434095
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269J08.bB6Ng01-269J08.g
ACCGA072141GA072142
length1,1631,149
definitionB6Ng01-269J08.b B6Ng01-269J08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(130,072,867 - 130,074,034)(130,218,710 - 130,219,862)
sequence
gaattctagatatgcagtaatgtattgggcccacacttgtctatacactt
gtatgcccttagcattgtgccaagatctgtgataagtgatattaccttaa
cagaaataagagacatcaaatgccgggtggggtggcaaatgcctttattc
taagccctttggaggcacaggcaggcagatttctgagttcgggccagcct
ggtcgagaaagtgagttccagtacagctaaggctacacagagaaaccctg
tctcaaaaaaccaaagagagagagagaaagagagagagagagagagagag
agagagagagagagagagagagagagagagagagaaagaaagagagaaac
aagagaggttttggtgttgaaagtctgttctcttgattatgctgattcca
tcagtgttgtgcccacatgtgcaaatgtttaaaatcgaatacatgaaaat
gtgtgcagtttgttttgcaagatcctctcaatatgaatgttttatttaga
tagttgctgggaatgtccatgctctattaggtaagtttatttcctaccaa
tacttttctgtgaagaggtaccaatgtgtagctcaggctggacttgaaat
ttctgggatgaccttatattacttaagttataatcctcctccctcaaact
cagaatcataggaattacaacattatgctgtcctagacagctaattaagt
tattttaaagtaatggcacaacgtctcttctatagtttggaatactacaa
agattgatttggagcttttttctttgtttgtttcctgtcacaaattgtaa
tttattcatttttacatctttttattagatattttcttcatttacatttc
aaatataattaccaaagtcccttataccctttccccctccctgcttccca
actcacccactgcttcctggccctggcattcccctgttttggggcaatat
tatcttcgcaagatcaagggcctctcctcccatagatggccaactaggcc
atcctctctacatatgcagctagatacaacagttttgtggggtactgggt
agttcatattgtgaatcctccaataggttcctggactcgttttcctccat
gttactttctctagcttcgttccataaggactggttccatcaatagagtg
actatgagcatcc
gaattcagtagattactatgagtctctgaagacccgttagctatggggtg
cttaggaataaagggaaacaatgcaaaaatattagttacaagcactcatc
tgtgactatatttcaaatatgccctttctccttaaaacacaaacctataa
aaccttgttttgtatgccaaacacatctgctttactattgtcctagcatt
cttattgacaaaatataaatgggaaagcaagattggtaaaataattcttt
gaaaatattgaaaatcagatttaaccactgattaaacacttgtgagtgtg
aaatgtgatgtagagttttggtgtgataagagaccatttctttataataa
acttagtagaaaatattttcatgatgaacttaggctaaacttaggctata
tattctgtatactttggccaatagaatttttaaaatcatgatttttttca
gtgaatgttcaaaatttactagttgcccactcttgtctttgctcttcagt
gacatgaaaataaggaaaatgaactttaagtctagaggatgtgtattttt
atctaaagcaagaatagaagatactgactgtaatattccctactactgta
tttgttggaagaaactggataaattccctgattaactttccaaccagagt
taaaggtaaaaatggaatgagttgatccttattcgtttcttgtaataatt
catgacaccaacaatcaagtattttgactacagaacaaagtctgctgtga
agagaaacaaagctgcttatgtaagctcaagacttacaatcatacaagtg
tatgaatttgtgggcagcccaggcttcataatatgtatgatgtcaacgtg
tgctacagagttagattctatgtcttaggaagcctaataataatggtgtt
aatgataataatactaaagctgtctagaacagaaatactttcaagggtga
agcaatatcttgggtagcatcctactaagcctcaattattcaatatgtat
ctagtatagttttagtccataacccacattatcgcatggttagtgtctgg
gatcgtatccacttatcaatatattctttaaatcagattcatacagtgat
cacatgtaatgtccatagcttgtgaatagcttggctcattgcttgtctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_130072867_130074034
seq2: B6Ng01-269J08.b_43_1205

seq1  GAATTCTAGATATGCAGTAATGTATTGGGCCCACACTTGTCTATACACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGATATGCAGTAATGTATTGGGCCCACACTTGTCTATACACTT  50

seq1  GTATGCCCTTAGCATTGTGCCAAGATCTGTGATAAGTGATATTACCTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCCCTTAGCATTGTGCCAAGATCTGTGATAAGTGATATTACCTTAA  100

seq1  CAGAAATAAGAGACATCAAATGCCGGGTGGGGTGGCAAATGCCTTTATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATAAGAGACATCAAATGCCGGGTGGGGTGGCAAATGCCTTTATTC  150

seq1  TAAGCCCTTTGGAGGCACAGGCAGGCAGATTTCTGAGTTCGGGCCAGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCCTTTGGAGGCACAGGCAGGCAGATTTCTGAGTTCGGGCCAGCCT  200

seq1  GGTCGAGAAAGTGAGTTCCAGTACAGCTAAGGCTACACAGAGAAACCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCGAGAAAGTGAGTTCCAGTACAGCTAAGGCTACACAGAGAAACCCTG  250

seq1  TCTCAAAAAACCAAAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAG  300
      ||||||||||||||||||||||||||||    ||||||||||||||||||
seq2  TCTCAAAAAACCAAAGAGAGAGAGAGAA----AGAGAGAGAGAGAGAGAG  296

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAGAG  346

seq1  AAACAAGAGAGGTTTTGGTGTTGAAAGTCTGTTCTCTTGATTATGCTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGAGAGGTTTTGGTGTTGAAAGTCTGTTCTCTTGATTATGCTGAT  396

seq1  TCCATCAGTGTTGTGCCCACATGTGCAAATGTTTAAAATCGAATACATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCAGTGTTGTGCCCACATGTGCAAATGTTTAAAATCGAATACATGA  446

seq1  AAATGTGTGCAGTTTGTTTTGCAAGATCCTCTCAATATGAATGTTTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTGCAGTTTGTTTTGCAAGATCCTCTCAATATGAATGTTTTATT  496

seq1  TAGATAGTTGCTGGGAATGTCCATGCTCTATTAGGTAAGTTTATTTCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGTTGCTGGGAATGTCCATGCTCTATTAGGTAAGTTTATTTCCTA  546

seq1  CCAATACTTTTCTGTGAAGAGGTACCAATGTGTAGCTCAGGCTGGACTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATACTTTTCTGTGAAGAGGTACCAATGTGTAGCTCAGGCTGGACTTG  596

seq1  AAATTTCTGGGATGACCTTATATTACTTAAGTTATAATCCTCCTCCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTGGGATGACCTTATATTACTTAAGTTATAATCCTCCTCCCTCA  646

seq1  AACTCAGAATCATAGGAATTACAACATTATGCTGTCCTAGACAGCTAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGAATCATAGGAATTACAACATTATGCTGTCCTAGACAGCTAATT  696

seq1  AAGTTATTTTAAAGTAATGGCACAACGTCTCTTCTATAGTTTGGAATACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATTTTAAAGTAATGGCACAACGTCTCTTCTATAGTTTGGAATACT  746

seq1  ACAAAGATTGATTTGGAGCTTTTTTCTTTGTTTGTTTCCTGTCACAAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGATTGATTTGGAGCTTTTTTCTTTGTTTGTTTCCTGTCACAAATT  796

seq1  GTAATTTATTCATTTTTACATCTTTTTATTAGATATTTTCTTCATTTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTATTCATTTTTACATCTTTTTATTAGATATTTTCTTCATTTACA  846

seq1  TTTCAAATATAATTACCAAAGTCCCTTATACCC-TTCCCCCTCCCTGCTT  899
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTCAAATATAATTACCAAAGTCCCTTATACCCTTTCCCCCTCCCTGCTT  896

seq1  CCCAACTCACCCACTGCTTCCTGGCCCTGGCATTCCCCTGTTTTGGGGC-  948
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCCAACTCACCCACTGCTTCCTGGCCCTGGCATTCCCCTGTTTTGGGGCA  946

seq1  ATATTATCTTCGCAAGATCAAGGGCCTCTCCTCCCATAGATGGCCAACTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATCTTCGCAAGATCAAGGGCCTCTCCTCCCATAGATGGCCAACTA  996

seq1  GGCCATCCTCTTCTACATATGCAGCTAGATAC-ACAGTTTTGTGGGGTAC  1047
      |||||||||| ||||||||||||||||||||| |||||||||||||||||
seq2  GGCCATCCTC-TCTACATATGCAGCTAGATACAACAGTTTTGTGGGGTAC  1045

seq1  TGGTTAGTTCATATTGTTGATCCTCCTATAGGGTTCCT-GACTCCTTTTT  1096
      ||| |||||||||||||  ||||||| ||| ||||||| ||||| |||| 
seq2  TGGGTAGTTCATATTGTGAATCCTCCAATA-GGTTCCTGGACTCGTTTTC  1094

seq1  CTCCTTGGTTACTTTCTCTAGC-TCCTTCATTAGGGGAACTGTGTTCCAT  1145
      |||| | ||||||||||||||| || |||  || ||  |||| |||||||
seq2  CTCCAT-GTTACTTTCTCTAGCTTCGTTCCATAAGG--ACTG-GTTCCAT  1140

seq1  CCAATAGA-TGACTATGAGCATCC  1168
       ||||||| |||||||||||||||
seq2  -CAATAGAGTGACTATGAGCATCC  1163

seq1: chr6_130218710_130219862
seq2: B6Ng01-269J08.g_64_1212 (reverse)

seq1  CAGACAAACAATGAGCCAAACTATTTCACAACTTAAGGACATTACATGTG  50
      ||||||| ||||||||||| ||| |||||||  || ||||||||||||||
seq2  CAGACAAGCAATGAGCCAAGCTA-TTCACAAGCTATGGACATTACATGTG  49

seq1  AACCACTGTATGATTCTGAATTTAAAG-ATATATTGAT-AGT-GATACGA  97
       | |||||||||| |||| |||||||| |||||||||| ||| |||||||
seq2  -ATCACTGTATGAATCTG-ATTTAAAGAATATATTGATAAGTGGATACGA  97

seq1  TCCAGAACACTAACCATTGCGAATAATGTGGGTTATGGACTAAAACTTAT  147
      |||   |||||||||| |||| |||||||||||||||||||||||||   
seq2  TCCCAGACACTAACCA-TGCG-ATAATGTGGGTTATGGACTAAAACT--A  143

seq1  TACTAGATACATATTGAATAATTGAGGCTTAGTAGGATGCTACCCAAGAT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGATACATATTGAATAATTGAGGCTTAGTAGGATGCTACCCAAGAT  193

seq1  ATTGCTTCACCCTTGAAAGTATTTCTGTTCTAGACAGCTTTAGTATTATT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTCACCCTTGAAAGTATTTCTGTTCTAGACAGCTTTAGTATTATT  243

seq1  ATCATTAACACCATTATTATTAGGCTTCCTAAGACATAGAATCTAACTCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTAACACCATTATTATTAGGCTTCCTAAGACATAGAATCTAACTCT  293

seq1  GTAGCACACGTTGACATCATACATATTATGAAGCCTGGGCTGCCCACAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCACACGTTGACATCATACATATTATGAAGCCTGGGCTGCCCACAAA  343

seq1  TTCATACACTTGTATGATTGTAAGTCTTGAGCTTACATAAGCAGCTTTGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACACTTGTATGATTGTAAGTCTTGAGCTTACATAAGCAGCTTTGT  393

seq1  TTCTCTTCACAGCAGACTTTGTTCTGTAGTCAAAATACTTGATTGTTGGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCACAGCAGACTTTGTTCTGTAGTCAAAATACTTGATTGTTGGT  443

seq1  GTCATGAATTATTACAAGAAACGAATAAGGATCAACTCATTCCATTTTTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGAATTATTACAAGAAACGAATAAGGATCAACTCATTCCATTTTTA  493

seq1  CCTTTAACTCTGGTTGGAAAGTTAATCAGGGAATTTATCCAGTTTCTTCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAACTCTGGTTGGAAAGTTAATCAGGGAATTTATCCAGTTTCTTCC  543

seq1  AACAAATACAGTAGTAGGGAATATTACAGTCAGTATCTTCTATTCTTGCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATACAGTAGTAGGGAATATTACAGTCAGTATCTTCTATTCTTGCT  593

seq1  TTAGATAAAAATACACATCCTCTAGACTTAAAGTTCATTTTCCTTATTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATAAAAATACACATCCTCTAGACTTAAAGTTCATTTTCCTTATTTT  643

seq1  CATGTCACTGAAGAGCAAAGACAAGAGTGGGCAACTAGTAAATTTTGAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCACTGAAGAGCAAAGACAAGAGTGGGCAACTAGTAAATTTTGAAC  693

seq1  ATTCACTGAAAAAAATCATGATTTTAAAAATTCTATTGGCCAAAGTATAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTGAAAAAAATCATGATTTTAAAAATTCTATTGGCCAAAGTATAC  743

seq1  AGAATATATAGCCTAAGTTTAGCCTAAGTTCATCATGAAAATATTTTCTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATATAGCCTAAGTTTAGCCTAAGTTCATCATGAAAATATTTTCTA  793

seq1  CTAAGTTTATTATAAAGAAATGGTCTCTTATCACACCAAAACTCTACATC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTTTATTATAAAGAAATGGTCTCTTATCACACCAAAACTCTACATC  843

seq1  ACATTTCACACTCACAAGTGTTTAATCAGTGGTTAAATCTGATTTTCAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCACACTCACAAGTGTTTAATCAGTGGTTAAATCTGATTTTCAAT  893

seq1  ATTTTCAAAGAATTATTTTACCAATCTTGCTTTCCCATTTATATTTTGTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAAAGAATTATTTTACCAATCTTGCTTTCCCATTTATATTTTGTC  943

seq1  AATAAGAATGCTAGGACAATAGTAAAGCAGATGTGTTTGGCATACAAAAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGAATGCTAGGACAATAGTAAAGCAGATGTGTTTGGCATACAAAAC  993

seq1  AAGGTTTTATAGGTTTGTGTTTTAAGGAGAAAGGGCATATTTGAAATATA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTTATAGGTTTGTGTTTTAAGGAGAAAGGGCATATTTGAAATATA  1043

seq1  GTCACAGATGAGTGCTTGTAACTAATATTTTTGCATTGTTTCCCTTTATT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGATGAGTGCTTGTAACTAATATTTTTGCATTGTTTCCCTTTATT  1093

seq1  CCTAAGCACCCCATAGCTAACGGGTCTTCAGAGACTCATAGTAATCTACT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGCACCCCATAGCTAACGGGTCTTCAGAGACTCATAGTAATCTACT  1143

seq1  GAATTC  1153
      ||||||
seq2  GAATTC  1149