BAC Information

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BAC

Clone NameB6Ng01-270A24
Chromosome6 (Build37)
Map Location 35,288,272 - 35,475,047
singlet/doubletdoublet
Overlap geneMtpn
Upstream geneAkr1b8, LOC664942, 2310005E10Rik, Akr1b7, Bpgm, LOC100039184, Cald1, Agbl3, Tmem140, 3110062M04Rik, 9530020G05Rik, Stra8, 2010107G12Rik, Cnot4, Nup205, 1810058I24Rik, Slc13a4, BC064033, 1700065J11Rik
Downstream geneLOC100039312, LOC100039327, 9330158H04Rik, Chrm2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270A24.bB6Ng01-270A24.g
ACCGA072501GA072502
length447737
definitionB6Ng01-270A24.b B6Ng01-270A24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,474,595 - 35,475,047)(35,288,272 - 35,289,003)
sequence
aaggccagtttgagctacatgaaaccctgtctcattaattaatggatagg
ctagaaaaacaggtgggcaaacagacagatgggttaaaccaacagcagtg
gtccataaaaatgatagttaacctttattaaatgtcttgctctattaaga
actatgcagcatactcatttgtcatcgtagttgaattttaaacaggttgg
agggtacagacagtcttattctatcttatcactaaggaatctaagattta
gcaagtgagtagtctctggtcttgtaacatgaaaaagttggaacactacc
cattctcctccagggttcttaaaatacatatctttataagtgtatatttt
aagtatctattttaacagatgtcaccattaggtatcacatgctccattgg
agaacagattttatatatatatgtgtgtgtgtgtgtgtgtgtgtgtg
gaattctgcagggcttccctgcggtgtcacagccagggatagacagagaa
gagaggtaggatgtggtgatgagccaccatatttagcccgtgagaatata
ggacacgccaatttgagtttgagatgagtggtggatcatttaaaaaaaat
atctaaccatgtgatagttaagatacactcccaacaagtcattagtcctc
atttggaattcaagttggactgaaagttctgtgttttgtctggcagttct
taggattctcagcagcaaagaagtctccaagcttgatggtagtgactctg
agggtgtggtgttcctctccttccaagtgaaagatgtcttctctcatctg
cttggggtctccaggagacagagatgctaatgtctttggggaggaaggag
agagaggctttcccaggtcaccgtggctgtagctaaattccctcccctgt
ttccttttgtgttgttctagagagaggaactactttaaggattgagggca
gaagggaagcggacagataaagccagctcacactgcagcttgtgtcctgg
ggagataatagccctgaacctgctaaaataaatggcctgctttgttcttg
aataataatcagttggcagctttgtttctgtctttcccagcagctggagg
aggagattttgatttcagatgaaaaaataatttgaccccaggctgaccat
atgggtcagaggagaagggaaattttaccaccactgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_35474595_35475047
seq2: B6Ng01-270A24.b_49_501 (reverse)

seq1  CACACACACACACACACACACACACATATATATATAAAATCTGTTCTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACATATATATATAAAATCTGTTCTCCA  50

seq1  ATGGAGCATGTGATACCTAATGGTGACATCTGTTAAAATAGATACTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGCATGTGATACCTAATGGTGACATCTGTTAAAATAGATACTTAAA  100

seq1  ATATACACTTATAAAGATATGTATTTTAAGAACCCTGGAGGAGAATGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACACTTATAAAGATATGTATTTTAAGAACCCTGGAGGAGAATGGGT  150

seq1  AGTGTTCCAACTTTTTCATGTTACAAGACCAGAGACTACTCACTTGCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCCAACTTTTTCATGTTACAAGACCAGAGACTACTCACTTGCTAA  200

seq1  ATCTTAGATTCCTTAGTGATAAGATAGAATAAGACTGTCTGTACCCTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGATTCCTTAGTGATAAGATAGAATAAGACTGTCTGTACCCTCCA  250

seq1  ACCTGTTTAAAATTCAACTACGATGACAAATGAGTATGCTGCATAGTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTTTAAAATTCAACTACGATGACAAATGAGTATGCTGCATAGTTCT  300

seq1  TAATAGAGCAAGACATTTAATAAAGGTTAACTATCATTTTTATGGACCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGAGCAAGACATTTAATAAAGGTTAACTATCATTTTTATGGACCAC  350

seq1  TGCTGTTGGTTTAACCCATCTGTCTGTTTGCCCACCTGTTTTTCTAGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTGGTTTAACCCATCTGTCTGTTTGCCCACCTGTTTTTCTAGCCT  400

seq1  ATCCATTAATTAATGAGACAGGGTTTCATGTAGCTCAAACTGGCCTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTAATTAATGAGACAGGGTTTCATGTAGCTCAAACTGGCCTTGAA  450

seq1  TTC  453
      |||
seq2  TTC  453

seq1: chr6_35288272_35289003
seq2: B6Ng01-270A24.g_67_803

seq1  GAATTCTGCAGGGCTTCCCTGCGGTGTCACAGCCAGGGATAGACAGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCAGGGCTTCCCTGCGGTGTCACAGCCAGGGATAGACAGAGAA  50

seq1  GAGAGGTAGGATGTGGTGATGAGCCACCATATTTAGCCCGTGAGAATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGTAGGATGTGGTGATGAGCCACCATATTTAGCCCGTGAGAATATA  100

seq1  GGACACGCCAATTTGAGTTTGAGATGAGTGGTGGATCATTTAAAAAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACGCCAATTTGAGTTTGAGATGAGTGGTGGATCATTTAAAAAAAAT  150

seq1  ATCTAACCATGTGATAGTTAAGATACACTCCCAACAAGTCATTAGTCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAACCATGTGATAGTTAAGATACACTCCCAACAAGTCATTAGTCCTC  200

seq1  ATTTGGAATTCAAGTTGGACTGAAAGTTCTGTGTTTTGTCTGGCAGTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAATTCAAGTTGGACTGAAAGTTCTGTGTTTTGTCTGGCAGTTCT  250

seq1  TAGGATTCTCAGCAGCAAAGAAGTCTCCAAGCTTGATGGTAGTGACTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATTCTCAGCAGCAAAGAAGTCTCCAAGCTTGATGGTAGTGACTCTG  300

seq1  AGGGTGTGGTGTTCCTCTCCTTCCAAGTGAAAGATGTCTTCTCTCATCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGTGGTGTTCCTCTCCTTCCAAGTGAAAGATGTCTTCTCTCATCTG  350

seq1  CTTGGGGTCTCCAGGAGACAGAGATGCTAATGTCTTTGGGGAGGAAGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGGTCTCCAGGAGACAGAGATGCTAATGTCTTTGGGGAGGAAGGAG  400

seq1  AGAGAGGCTTTCCCAGGTCACCGTGGCTGTAGCTAAATTCCCTCCCCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGCTTTCCCAGGTCACCGTGGCTGTAGCTAAATTCCCTCCCCTGT  450

seq1  TTCCTTTTGTGTTGTTCTAGAGAGAGGAACTACTTTAAGGATTGAGGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTGTGTTGTTCTAGAGAGAGGAACTACTTTAAGGATTGAGGGCA  500

seq1  GAAGGGAAGCGGACAGATAAAGCCAGCTCACACTGCAGCTTGTGTCCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAAGCGGACAGATAAAGCCAGCTCACACTGCAGCTTGTGTCCTGG  550

seq1  GGAGATAATAGCCCTGAACCTGCTAAAATAAATGGCCTGCTTTGTTCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATAATAGCCCTGAACCTGCTAAAATAAATGGCCTGCTTTGTTCTTG  600

seq1  AATAATAATCAGTTGGCAGCTTTG-TTCTGTC-TTCCCAGCAGCTGGAGG  648
      |||||||||||||||||||||||| ||||||| |||||||||||||||||
seq2  AATAATAATCAGTTGGCAGCTTTGTTTCTGTCTTTCCCAGCAGCTGGAGG  650

seq1  AGGAGATTTTGATTTCAGA-GGAAAAATAA-TTGACCCCAGGCTGACCAT  696
      ||||||||||||||||||| | |||||||| |||||||||||||||||||
seq2  AGGAGATTTTGATTTCAGATGAAAAAATAATTTGACCCCAGGCTGACCAT  700

seq1  ATGGGTCAGAGGAGAAGGGAAA-TTTACCACCACTGG  732
      |||||||||||||||||||||| ||||||||||||||
seq2  ATGGGTCAGAGGAGAAGGGAAATTTTACCACCACTGG  737