BAC Information

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BAC

Clone NameB6Ng01-270J07
Chromosome6 (Build37)
Map Location 60,989,886 - 60,991,004
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434019, LOC671300, EG627178, LOC100041706, LOC100041717, A530053G22Rik, LOC667066, LOC100041726, Snca, ENSMUSG00000064018, Mmrn1
Downstream geneLOC100041756, LOC100041764, C130092O11Rik, LOC100042694
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270J07.bB6Ng01-270J07.g
ACCGA072883GA072884
length9971,103
definitionB6Ng01-270J07.b B6Ng01-270J07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagctctgagccccatttttaatggggttatttgaatt
tctggagtccagcttcttgagctctttgtatatgttggatattagtcccc
tatcagatttaggatttatacaaatcctttcccaatctgttggtggcctt
tttgtcttattgacagtatcttttgccttacagaagctttgcaattttat
gaggtcccatttgatcttacagcgcaagccattgctgttctgtttaggaa
tttttcccctgtgcccatatctttgaggcttttccctactttctcctcta
ttaatttcagtgtctctggtcttatgtggaggtctttgatccacttagac
ttgagctttgtacaagcagataagaatggatcaatttgcattcttctaca
tgataaccaccagttgtgccagcaccatttgttgaaaatgctgtcttttt
ctctcctggatggttttagctcccttgtcaaagatcaagtgaccatagct
gtgtggattcatttctgggtcttcaattctattccattgatctacctgtc
tgtcattgtatcagtaccatgcaggtttttatcacaattgcttaatgtca
ggcatggtgattccaccagaggttcttttatccttgagaagactttttgc
tatcctaggtttttttatttttccagatgactttgcaaattgccctttct
atctcagtgaaggattgatttggaattttgatggggattgcattgaatct
gtagattgcttttggcaggatagccatttttactatattaatcctgtcga
tcctatggaaattttttaagggaagaacctacccttctgtagataaccct
catctatgctttgtaaggatgcccaataaatttactggttctccagagtg
aacattagtagtactctatcccagtttgtcttggggacctcatgaagaag
gttgccctgtccttaccctgggagggaattttagcacatagagcttc
gaattcagtgcatgccaagcctttgtcccatactgtctcctgcctataac
accatttctctgtttttctcttctataaacacaagtgcgacagatgttaa
agcacccaggcccttttgggtcctgtggagaaaactttatgaataaggtg
ggaacacaccaaatgcccttgcccttcattattcaggatcatctgatcct
aaccactgccacattctagagtcactccttacccagacccattccctcac
ttaaagaatgaacagccccagcatggtctacaaagtgagttctaggacag
ccagggctacacagagaaaccctgtctcaaaaaaccaaaaccaaaaccaa
aacaaacaaacaacaaaaaagaatgaacagcttatgcctcatagcctaag
tcggatgtacctcattcctctacttcaactacatagcataggtcacatgt
taaaccttctgccttgtaggataaaactgcctcctttccctatgaaacct
aaaaagtaccccttttcttcaattttaggctagaaactctctactacaga
actctgctctgtgaccaagcttgttaaaggacttttgtccgaagacagtt
tttacctctctccaagcccctccccttctccttctctaaaacccaattaa
gaacaacaaaagatgttacaatgttaattactcaggaagggtagaagttg
ttttgtaaaaggccatctgaagttaatttggattagtatagatatacaca
aactctgtatgtctttcatacataccacacagcagactggatttccttag
acagttataacagatagtccataaagcaattatttgactgtttgctttag
ttgctctgaggaggtctttgcatatgaatattaagaaaacaattaaaagc
tttagtgacattaaatggttgtaacctttagaacactattttatctagct
ttctgttgctgtgatatgcatgtaccatatcaaaaagcaattagaaagga
aagggtttatttcatcttagaattccaagtgtgatctcactgagagagcc
agcgtagactttgagcagaaactggagatggactgagcagagatcaggaa
gag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_60989886_60991004
seq2: B6Ng01-270J07.g_65_1167

seq1  GAATTCAGTGCATGCCAAGCCTTTGTCCCATACTGTCTCCTGCCTATAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGCATGCCAAGCCTTTGTCCCATACTGTCTCCTGCCTATAAC  50

seq1  ACCATTTCTCTGTTTTTCTCTTCTATAAACACAAGTGCGACAGATGTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTCTCTGTTTTTCTCTTCTATAAACACAAGTGCGACAGATGTTAA  100

seq1  AGCACCCAGGCCCTTTTGGGTCCTGTGGAGAAAACTTTATGAATAAGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCCAGGCCCTTTTGGGTCCTGTGGAGAAAACTTTATGAATAAGGTG  150

seq1  GGAACACACCAAATGCCCTTGCCCTTCATTATTCAGGATCATCTGATCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACACACCAAATGCCCTTGCCCTTCATTATTCAGGATCATCTGATCCT  200

seq1  AACCACTGCCACATTCTAGAGTCACTCCTTACCCAGACCCATTCCCTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTGCCACATTCTAGAGTCACTCCTTACCCAGACCCATTCCCTCAC  250

seq1  TTAAAGAATGAACAGCCCCAGCATGGTCTACAAAGTGAGTTCTAGGACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAATGAACAGCCCCAGCATGGTCTACAAAGTGAGTTCTAGGACAG  300

seq1  CCAGGGCTACACAGAGAAACCCTGTCTCAAAAAACCAAAACCAAAACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCTACACAGAGAAACCCTGTCTCAAAAAACCAAAACCAAAACCAA  350

seq1  AACAAACAAACAACAAAAAAGAATGAACAGCTTATGCCTCATAGCCTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAACAACAAAAAAGAATGAACAGCTTATGCCTCATAGCCTAAG  400

seq1  TCGGATGTACCTCATTCCTCTACTTCAACTACATAGCATAGGTCACATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGATGTACCTCATTCCTCTACTTCAACTACATAGCATAGGTCACATGT  450

seq1  TAAACCTTCTGCCTTGTAGGATAAAACTGCCTCCTTTCCCTATGAAACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTTCTGCCTTGTAGGATAAAACTGCCTCCTTTCCCTATGAAACCT  500

seq1  AAAAAGTACCCCTTTTCTTCAATTTTAGGCTAGAAACTCTCTACTACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTACCCCTTTTCTTCAATTTTAGGCTAGAAACTCTCTACTACAGA  550

seq1  ACTCTGCTCTGTGACCAAGCTTGTTAAAGGACTTTTGTCCGAAGACAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCTCTGTGACCAAGCTTGTTAAAGGACTTTTGTCCGAAGACAGTT  600

seq1  TTTACCTCTCTCCAAGCCCCTCCCCTTCTCCTTCTCTAAAACCCAATTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTCTCTCCAAGCCCCTCCCCTTCTCCTTCTCTAAAACCCAATTAA  650

seq1  GAACAACAAAAGATGTTACAATGTTAATTACTCAGGAAGGGTAGAAGTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAACAAAAGATGTTACAATGTTAATTACTCAGGAAGGGTAGAAGTTG  700

seq1  TTTTGTAAAAGGCCATCTGAAGTTAATTTGGATTAGTATAGATATACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTAAAAGGCCATCTGAAGTTAATTTGGATTAGTATAGATATACACA  750

seq1  AACTCTGTATGTCTTTCATACATACCACACAGCAGACTGGATTTCCTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGTATGTCTTTCATACATACCACACAGCAGACTGGATTTCCTTAG  800

seq1  ACAGTTATAACAGATAGTCCATAAAGCAATTATTTGACTGTTTGCTTTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTATAACAGATAGTCCATAAAGCAATTATTTGACTGTTTGCTTTAG  850

seq1  TTGCTCTGAGGAGGTCTTTGCATATGAATATTAAGAAAACAATTAAAAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTGAGGAGGTCTTTGCATATGAATATTAAGAAAACAATTAAAAGC  900

seq1  TTTAGGTGACATTAAATGGTTGTAACCTTTAGAACACTATTTTATCTAGC  950
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTA-GTGACATTAAATGGTTGTAACCTTTAGAACACTATTTTATCTAGC  949

seq1  TTTCTGTTGCTGTGATATGCATGTACCATTATCAAAAAGCAATTTAGAAA  1000
      |||||||||||||||||||||||||||| ||||||||||||| |||||||
seq2  TTTCTGTTGCTGTGATATGCATGTACCA-TATCAAAAAGCAA-TTAGAAA  997

seq1  GGAAAGGGTTTATTTCATCTTAGAATTCCAAAGGTGTGATCTTCCACTGA  1050
      |||||||||||||||||||||||||||||||  |||||||||  ||||||
seq2  GGAAAGGGTTTATTTCATCTTAGAATTCCAA--GTGTGATCT--CACTGA  1043

seq1  GAGAAGCCAGCGTAGGAACTTTGAGCAGAAACCTGGAGAAAGGAACTGAA  1100
      ||| |||||||||||  |||||||||||||| ||||||  | | |||| |
seq2  GAG-AGCCAGCGTAG--ACTTTGAGCAGAAA-CTGGAG--ATGGACTG-A  1086

seq1  GCAGAGATCAGGGAAAGAG  1119
      ||||||||||||  |||||
seq2  GCAGAGATCAGG--AAGAG  1103