MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-271A23
Chromosome	6 (Build37)
Map Location	65,540,183 - 65,541,315
singlet/doublet	singlet
Overlap gene	9030611K07Rik
Upstream gene	Grid2, Atoh1, LOC100041833, LOC667115, Smarcad1, Ptgds2, LOC100042741, LOC100041858, LOC634745, EG667141, C130060K24Rik
Downstream gene	A930038C07Rik, LOC667160, Prdm5, 4930544G11Rik, Ppia-ps6_651.1, LOC100041916, Tpm3-rs3, LOC627751, Mad2l1, V1rc15, LOC100041941, Aurkb-ps
Link	Open Mouse BAC browser

Click to get alignment info.

name	Grid2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14804 MGI:95813
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atoh1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11921 MGI:104654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041833 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041833
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC667115 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667115
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Smarcad1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13990 MGI:95453
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ptgds2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54486 MGI:1859384
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042741 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042741
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 176 ESTs, 4 Proteins pseudo : _no_value

name	LOC100041858 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041858
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC634745 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:634745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	EG667141 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667141 MGI:3647865
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein pseudo : _no_value

name	C130060K24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243407 MGI:2441881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9030611K07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:414084 MGI:3041165
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A930038C07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68169 MGI:1915419
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667160 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667160
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 Proteins pseudo : _no_value

name	Prdm5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70779 MGI:1918029
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930544G11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67653 MGI:1914903
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Ppia-ps6_651.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545843
definition	note : peptidyl-prolyl cis-trans isomerase A pseudogene 6_651.1 pseudo : _no_value

name	LOC100041916 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041916
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Tpm3-rs3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110376 MGI:99709
definition	note : tropomyosin 3, related sequence 3 pseudo : _no_value

name	LOC627751 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Mad2l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56150 MGI:1860374
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	V1rc15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171188 MGI:2159451
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041941 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041941
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Aurkb-ps (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384398
definition	note : aurora kinase B pseudogene pseudo : _no_value

name	Grid2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130886 GeneID:14804 MGI:95813
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, delta 2 transcript_id : NM_008167.2

name	Atoh1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349947 GeneID:11921 MGI:104654
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : atonal homolog 1 (Drosophila) transcript_id : NM_007500.3

name	Smarcad1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62543564 GeneID:13990 MGI:95453
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1` transcript_id : NM_007958.1

name	Ptgds2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382100 GeneID:54486 MGI:1859384
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prostaglandin D2 synthase 2, hematopoietic transcript_id : NM_019455.3

name	LOC634745 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255170 GeneID:634745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : similar to zinc finger protein 533 transcript_id : XM_001477139.1

name	C130060K24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380917 GeneID:243407 MGI:2441881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C130060K24 gene transcript_id : NM_175524.3

name	9030611K07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110665743 GeneID:414084 MGI:3041165
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9030611K07 gene transcript_id : NM_001001495.2

name	A930038C07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802440 GeneID:68169 MGI:1915419
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A930038C07 gene transcript_id : NM_172399.2

name	Prdm5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286827 GeneID:70779 MGI:1918029
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PR domain containing 5 transcript_id : NM_027547.2

name	LOC100041916 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255172 GeneID:100041916
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041916 transcript_id : XM_001477206.1

name	Mad2l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369937 GeneID:56150 MGI:1860374
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD2 (mitotic arrest deficient, homolog)-like 1 (yeast) transcript_id : NM_019499.3

name	V1rc15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381477 GeneID:171188 MGI:2159451
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, C15 transcript_id : NM_134170.3

name	LOC100041941 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255174 GeneID:100041941
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041941 transcript_id : XM_001477238.1

name	Grid2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680091 CCDS:CCDS20202.1 GeneID:14804 MGI:95813
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA]; GO:0019717 - synaptosome [Evidence IDA] GO_function : GO:0005234 - glutamate-gated ion channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : creeper; hotfoot; lurcher; minisatellite 10ac detected by probe MMS10 product : glutamate receptor, ionotropic, delta 2 protein_id : NP_032193.1

name	Atoh1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680742 CCDS:CCDS20203.1 GeneID:11921 MGI:104654
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0031490 - chromatin DNA binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IMP]; GO:0042491 - auditory receptor cell differentiation [Evidence IDA] [Evidence IMP]; GO:0042668 - auditory receptor cell fate determination [Evidence IDA]; GO:0007411 - axon guidance [Evidence IMP]; GO:0007420 - brain development [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IMP]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0030182 - neuron differentiation [Evidence IMP]; GO:0001764 - neuron migration [Evidence IMP]; GO:0045609 - positive regulation of auditory receptor cell differentiation [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IMP]; GO:0045664 - regulation of neuron differentiation [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : atonal homolog 1 protein_id : NP_031526.1

name	Smarcad1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62543565 CCDS:CCDS20204.1 GeneID:13990 MGI:95453
definition	GO_component : GO:0016363 - nuclear matrix [Evidence ISS]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0016568 - chromatin modification [Evidence ISS]; GO:0009117 - nucleotide metabolism [Evidence ISS]; GO:0045941 - positive regulation of transcription [Evidence ISS]; GO:0051260 - protein homooligomerization [Evidence ISS]; GO:0000018 - regulation of DNA recombination [Evidence ISS] codon_start : 1 note : enhancer trap locus 1 product : SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1` protein_id : NP_031984.1

name	Ptgds2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980908 CCDS:CCDS20205.1 GeneID:54486 MGI:1859384
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004364 - glutathione transferase activity [Evidence ISS]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0004667 - prostaglandin-D synthase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006633 - fatty acid biosynthesis [Evidence IEA]; GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0001516 - prostaglandin biosynthesis [Evidence IEA]; GO:0006693 - prostaglandin metabolism [Evidence IDA] codon_start : 1 exception : mismatches in translation product : prostaglandin D2 synthase 2, hematopoietic protein_id : NP_062328.2

name	LOC634745 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255171 GeneID:634745
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477189.1

name	C130060K24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425292 CCDS:CCDS20206.1 GeneID:243407 MGI:2441881
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : hypothetical protein LOC243407 protein_id : NP_780733.1

name	9030611K07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110665744 GeneID:414084 MGI:3041165
definition	codon_start : 1 note : TNFAIP3 interacting protein 3; TNFAIP3-interacting protein 3 product : RIKEN cDNA 9030611K07 protein_id : NP_001001495.2

name	A930038C07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369491 CCDS:CCDS20207.1 GeneID:68169 MGI:1915419
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC68169 protein_id : NP_765987.1

name	Prdm5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124286828 CCDS:CCDS20208.1 GeneID:70779 MGI:1918029
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : PR domain containing 5 protein_id : NP_081823.2

name	LOC100041916 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255173 GeneID:100041916
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477256.1

name	Mad2l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543218 CCDS:CCDS20210.1 GeneID:56150 MGI:1860374
definition	GO_component : GO:0000775 - chromosome, pericentric region [Evidence IDA]; GO:0000776 - kinetochore [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005816 - spindle pole body [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0000070 - mitotic sister chromatid segregation [Evidence IMP]; GO:0007094 - mitotic spindle checkpoint [Evidence ISS] [Evidence IMP]; GO:0045841 - negative regulation of mitotic metaphase/anaphase transition [Evidence TAS] codon_start : 1 product : MAD2 (mitotic arrest deficient, homolog)-like 1 protein_id : NP_062372.2

name	V1rc15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21717661 CCDS:CCDS20211.1 GeneID:171188 MGI:2159451
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005550 - pheromone binding [Evidence ISS]; GO:0016503 - pheromone receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0019236 - response to pheromone [Evidence ISS] codon_start : 1 product : vomeronasal 1 receptor, C15 protein_id : NP_598931.1

name	LOC100041941 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255175 GeneID:100041941
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477288.1

name	LOC100041833 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041833
definition	number : 1 pseudo : _no_value

name	LOC100041833 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041833
definition	number : 2 pseudo : _no_value

name	LOC100041833 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041833
definition	number : 3 pseudo : _no_value

name	LOC100041833 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041833
definition	number : 4 pseudo : _no_value

name	LOC100041833 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041833
definition	number : 5 pseudo : _no_value

name	LOC100041833 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041833
definition	number : 6 pseudo : _no_value

name	LOC100041833 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041833
definition	number : 7 pseudo : _no_value

name	LOC100041833 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041833
definition	number : 8 pseudo : _no_value

name	LOC667115 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667115
definition	number : 1 pseudo : _no_value

name	LOC667115 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667115
definition	number : 2 pseudo : _no_value

name	LOC100041858 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041858
definition	number : 1 pseudo : _no_value

name	LOC100041858 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041858
definition	number : 2 pseudo : _no_value

name	LOC667160 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667160
definition	number : 1 pseudo : _no_value

name	LOC627751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627751
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:142630
definition	standard_name : D6Rck365

name	(CDS detail)
type	STS
link
xref	UniSTS:143255
definition	standard_name : Grid2

name	(CDS detail)
type	STS
link
xref	UniSTS:143256
definition	standard_name : Grid2

name	(CDS detail)
type	STS
link
xref	UniSTS:207969
definition	standard_name : AI450142

name	(CDS detail)
type	STS
link
xref	UniSTS:124832
definition	standard_name : D43694

name	(CDS detail)
type	STS
link
xref	UniSTS:207968
definition	standard_name : BB385668

name	(CDS detail)
type	STS
link
xref	UniSTS:130849
definition	standard_name : D6Mit299

name	(CDS detail)
type	STS
link
xref	UniSTS:179384
definition	standard_name : AU016938

name	(CDS detail)
type	STS
link
xref	UniSTS:142612
definition	standard_name : D6Rck330

name	(CDS detail)
type	STS
link
xref	UniSTS:36573
definition	standard_name : A003A21

name	(CDS detail)
type	STS
link
xref	UniSTS:498357
definition	standard_name : Snx10

name	(CDS detail)
type	STS
link
xref	UniSTS:130719
definition	standard_name : D6Mit175

name	(CDS detail)
type	STS
link
xref	UniSTS:145243
definition	standard_name : AU048793

name	(CDS detail)
type	STS
link
xref	UniSTS:124470
definition	standard_name : 42.MMHAP62FLF6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:235460
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179383
definition	standard_name : AW226546

name	(CDS detail)
type	STS
link
xref	UniSTS:142613
definition	standard_name : D6Rck333

name	(CDS detail)
type	STS
link
xref	UniSTS:130718
definition	standard_name : D6Mit174

name	(CDS detail)
type	STS
link
xref	UniSTS:674
definition	standard_name : SHGC-76423

name	(CDS detail)
type	STS
link
xref	UniSTS:130871
definition	standard_name : D6Mit318

name	(CDS detail)
type	STS
link
xref	UniSTS:124439
definition	standard_name : 41.MMHAP87FRF11.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130666
definition	standard_name : D6Mit125

name	(CDS detail)
type	STS
link
xref	UniSTS:210373
definition	standard_name : RH136383

name	(CDS detail)
type	STS
link
xref	UniSTS:231622
definition	standard_name : RH142375

name	(CDS detail)
type	STS
link
xref	UniSTS:144847
definition	standard_name : Dnajc2

name	(CDS detail)
type	STS
link
xref	UniSTS:116609
definition	standard_name : D6Mit162

name	(CDS detail)
type	STS
link
xref	UniSTS:130707
definition	standard_name : D6Mit162.1

name	(CDS detail)
type	STS
link
xref	UniSTS:123473
definition	standard_name : 20.MMHAP44FLG2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:142615
definition	standard_name : D6Rck337

name	(CDS detail)
type	STS
link
xref	UniSTS:209952
definition	standard_name : RH135956

name	(CDS detail)
type	STS
link
xref	UniSTS:207971
definition	standard_name : BE335543

name	(CDS detail)
type	STS
link
xref	UniSTS:124157
definition	standard_name : 35.MMHAP81FLD5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:490600
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:207970
definition	standard_name : BE634783

name	(CDS detail)
type	STS
link
xref	UniSTS:144963
definition	standard_name : AU048513

name	(CDS detail)
type	STS
link
xref	UniSTS:123582
definition	standard_name : 22.MMHAP97FRH7.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130998
definition	standard_name : D6Mit95

name	(CDS detail)
type	STS
link
xref	UniSTS:123398
definition	standard_name : 18.MMHAP79FRF9.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:225980
definition	standard_name : Mad2l1

name	(CDS detail)
type	STS
link
xref	UniSTS:144520
definition	standard_name : Stk5

name	(CDS detail)
type	STS
link
xref	UniSTS:78798
definition	standard_name : Z72355

name	LOC100042741 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255206 GeneID:100042741
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 176 ESTs, 4 Proteins product : similar to zinc finger protein 706 pseudo : _no_value transcript_id : XR_033904.1

name	EG667141 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94377403 GeneID:667141 MGI:3647865
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein product : predicted gene, EG667141 pseudo : _no_value transcript_id : XR_001981.1

name	4930544G11Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149255100 GeneID:67653 MGI:1914903
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930544G11 gene pseudo : _no_value transcript_id : XR_035138.1

clone name	MSMg01-362A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315F07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-275A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070M01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-304G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535I19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-515F19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-372B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280O07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-448B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167L12
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-271A23.b	B6Ng01-271A23.g
ACC	GA073241	GA073242
length	1,133	1,157
definition	B6Ng01-271A23.b	B6Ng01-271A23.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattccacttagtttctcattatgtcttgggcaactctttaagaagact ttgagataatccagcaagttggcagagtgggtaattcacaggccactgag acaaataactgaatttgatctctgggacccacaccgtggaaggaaaggcc tatcattggcaggcagtcagtcttctggcctccacagtcactctgtggca tatgtgtatgcacacatttaaaataaatgaataaaaatatactaaaacta agaaagcataataatgaattcattgaaatagtgaatgttttttgtaatag ctgaaacaaattatagcaccagttgaatatattaatgttataagtctttt actgctaaatatcttatttctaatcacatctttacagtacatgttttaga ctttacactgaactaacttcttctacagaacaaaatcacataggaaaagg aaactgtgcagatgtggtcctgtcatttagtagaagcagcccaactcagt gagttcaaagccagtgacttttcatttgtcaaataatactggttcaaatt ctgagcaggtctcaattgaagaaggtggttcagctactgaagttctctac tctttgacccctctatcatcgtgttcttggctctgagtatagccacctta acctgacacatgctcttacctctgtgtgctccatgcaagctccagccgca ctcagtccagacatgtcctgggaagacaaggaagctgtttttctgagagt cttgtaaagcagaaggaaaaagagagaaagaaaagctcttatagtgcctt tcacgatgagaacgggcaagctttggaaaacctatgtctctgttgactcg cggtagaaaataataacaagttctccttagactccagcagaagtgactgt atgttaaccacacagaataaggatgcatgagaagtgtgattttaactttt attggcttccatgtaactgggatttcccaggatgtctcaagtaggcaggc agtgactagatgtgggggcagattggccttgctatgtaatataaattacc cttcttcctttaagagcagttctctactagaggaggaagtttctactcca cagaatgctggggcttaacctagctttcttctg	gaattctttgcttagctctgagtcccatattttaatggggttatttgatt ttctggtgtctaccgtcttgagttctttatatatgtgtgtatatatatat atattagatattagtcctctatctcatttgggataggtaaagatcctttc ccaatctgttggtggcctttttgtcttattgacagtgttttttgccttac agaagctttgcagtttcatgaggtcccatttgtcaattctcgatcttaca gcacaagcttctattcaggaatttttcccctgttccaatatctctgaggc tttttcccactttctcctctataagtttcagtgtctctggttttatgtgg agctccttgatctacttagatttgtccttagtgcaaggagataggaatgg atcaatgcacattcttctacatgctaaccaccagttgtgccagcaccatt ttgaaaatgctgtcttttttccactggatggttttagctcccttgtcgaa gatcaattgaccataggtgcgtggctccatttctggctcttcaattctat tccattggtctacttttcggtcgctatacaagtaccatgccgtttttatc acaattgctctgtagtaaagctttaggccaggcatggtgattccaccaga ggttttttttatccttgagaagagtttttgctatcctaacttttttgtta ttccagatgaatttgcagattgctctttctaattagttgaagaattgagt tggaattttgatggggattgcattgaatctgtagattgctttggtcaaga cagtcatttttacaatgttgatcttgccaatccatgagcatgggagatct ttccatcttctgagatcttctttaatttctttcttcagagacttgaagtt cttatcatacagacctttcatttccttagttagagttaggtattttatat tatttgtgactattgagaatggtgttgttccctaatttcttctcatccta ttattcttgtgtacagaaggccattgagcttgttgagtaagtttatatcc agctacttcacagaagcctgtatcaagtaggattctttgggggaacttag tccatatataggatcaatatcacatggaattgcactcgttgattgtatcc cccgcga
quality values	Open. Hide. 58 26 27 38 58 58 28 18 45 62 54 62 62 62 62 62 62 62 47 31 62 47 62 54 62 62 62 62 62 62 62 51 51 50 34 44 59 56 38 46 59 62 62 62 62 62 62 59 43 62 62 62 59 59 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 59 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 59 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 59 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 59 59 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 58 58 58 58 45 54 58 58 58 58 58 58 58 58 58 58 58 54 52 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 44 58 58 41 58 54 58 58 54 52 58 58 58 58 58 58 52 58 58 42 54 32 58 54 54 58 54 53 53 58 54 52 58 54 58 58 54 52 58 58 51 58 58 46 49 51 58 54 58 58 58 54 46 39 58 58 58 58 51 51 51 58 53 53 58 58 51 49 58 51 51 58 51 54 58 58 41 58 51 58 58 39 29 49 49 50 58 49 54 51 50 58 58 58 51 58 50 47 58 51 58 46 50 50 51 51 51 58 58 58 54 51 49 35 37 58 58 58 58 58 51 58 58 58 49 51 51 54 40 51 58 50 40 58 52 58 58 51 50 32 41 58 58 51 51 40 37 51 51 37 33 41 41 50 50 30 41 32 34 47 51 51 40 49 40 34 42 49 54 41 39 46 31 34 38 23 54 26 39 32 49 52 51 49 54 54 49 37 42 39 37 54 30 39 22 37 41 53 41 54 38 44 54 51 40 39 53 37 44 34 24 47 40 54 54 54 45 28 54 31 54 31 41 54 52 40 53 54 54 47 32 39 45 52 45 45 52 32 45 31 42 37 24 40 31 51 31 31 35 32 26 40 29 31 46 23 51 34 29 29 49 36 32 32 41 25 32 42 52 31 31 43 39 51 51 30 20 42 31 32 30 45 31 34 31 43 37 33 28 31 31 34 24 40 30 31 37 40 31 24 45 29 46 46 46 42 32 30 31 31 43 28 41 32 31 33 30 42 31 30 32 34 28 31 43 29 35 28 31 31 43 25 31 32 36 24 36 28 17 32 30 25 24 31 39 21 26 25 27 24 27 25 31 26 12 25 38 32 38 32 31 31 25 25 21 12 9 11 25 18 32 32 21 26 30 29 20 36 37 31 31 29 22 29 26 24 44 43 31 21 26 26 30 48 48 31 31 23 27 20 30 30 37 29 19 28 22 27 30 13 17 21 23 21 23 43 28 14 21 48 26 22 43 28 27 21 23 17 14 29 22 33 31 27 19 20 34 31 19 17 21 27 14 19 19 19 27 17 18 28 26 28 14 28 16 16 10 17 7 5 30 40 47 21 15 22 10 27 11 13 8 19 5 13 8 10 24 20 9 18 20 26 18 18 7 5 8 11 9 29 22 3 8 22 20 40 21 19 13 11 13 25 10 15 15 13 9 5 7 9 26 20 21 12 4 9 7 15 11 23 7 8 11 13 15 5 7 5 22 13 6 22 11 16 7 22 30 16 13 16 10 19 8 23 7 7 6 3 4 6 24 6 6 7 5 16 28 23 14 6 7 7 15 11 6 11 17 20 9 8 3 3 12 10 4 7 6 6 3	Open. Hide. 62 47 42 39 62 62 62 62 62 62 56 56 25 30 27 38 56 62 62 62 59 44 59 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 59 62 62 62 54 62 59 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 43 43 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 47 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 38 62 62 62 62 46 34 38 47 62 62 54 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 62 62 62 62 62 62 62 62 52 62 58 58 58 58 58 58 58 46 46 58 54 58 54 58 54 58 58 37 54 41 54 58 58 58 58 58 54 54 58 49 54 54 54 58 58 58 58 58 58 58 58 54 58 54 43 52 58 58 58 54 58 58 58 50 58 58 58 58 54 42 54 54 58 58 52 54 58 58 58 48 42 58 54 58 58 54 58 54 54 58 58 58 58 58 54 51 58 47 51 50 54 54 51 53 51 50 36 58 58 46 52 58 58 50 49 58 52 58 50 52 58 58 58 47 50 47 46 50 49 46 58 54 58 58 51 51 53 53 58 50 53 40 46 58 58 51 50 50 50 58 53 50 33 44 41 41 41 51 58 53 50 40 58 58 40 58 38 31 50 52 47 25 50 50 37 49 39 27 58 25 58 58 58 58 58 58 40 50 47 49 50 49 41 49 41 28 46 50 39 58 32 50 58 58 58 50 41 41 52 52 42 50 50 50 53 51 41 40 54 54 54 54 25 50 29 42 37 49 35 37 44 25 32 51 30 45 54 40 42 54 50 49 45 35 25 41 25 39 46 29 41 53 39 51 53 38 29 31 47 37 38 42 34 46 42 37 53 53 34 44 45 30 53 39 46 32 39 28 29 35 39 42 23 54 53 51 42 35 32 45 49 49 40 41 17 42 39 32 29 45 34 45 35 37 32 45 31 47 31 45 28 39 29 31 52 31 31 51 35 45 45 30 42 29 34 31 45 31 33 30 26 36 32 34 51 51 46 28 30 26 25 23 31 51 31 33 37 31 25 26 29 31 31 42 31 22 24 31 32 30 28 31 32 42 23 31 31 31 38 47 31 42 32 33 24 32 36 48 33 27 31 27 34 37 25 32 23 25 30 38 32 31 32 31 20 30 31 25 46 31 15 27 29 46 39 32 24 48 36 31 25 17 25 17 10 38 23 31 18 38 29 30 22 30 21 31 32 32 9 26 22 31 33 24 29 26 31 21 22 34 17 13 8 26 32 16 15 30 43 28 14 22 17 17 32 27 29 23 31 16 32 27 22 17 15 18 8 6 14 33 48 47 22 21 21 24 11 30 12 10 40 8 15 17 26 28 20 10 16 9 24 27 21 8 7 16 9 22 18 5 18 21 6 6 7 12 3 29 20 19 15 22 7 32 5 13 21 24 7 7 21 21 26 10 18 13 28 8 18 5 4 5 17 6 19 9 5 7 4 6 11 5 7 6 18 9 17 7 13 20 11 15 13 4 3 3 6 10 5 3 2 5 11 4 3 2 6 4 28 28 17 9 5 10 7 14 5 6 16 21 10 11 11 5 19 9 10 14 4 4 8 24 4 6 6 4 6 9 1 4 6 5 3 3 3 3 2 3 3 2 4 15 9 25 10 7 10 11 8 3 2 2 2 3 9 2 4 3 2 6 4 5 2 3 6 6 9 5 21 8 12 16 5 5 9 1 1 2 6 4 3 3 3 5 11 3 3 7 5 4 5 12 16 4 5 6 10 6 3 3 7 5 4 5 7 22 17 28 8 5 4 4 3 2

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_65540183_65541315
seq2: B6Ng01-271A23.b_45_1177 (reverse)

seq1  CAGAAGAAAAGCTAGGTT-AGCCCCAGGCATTCTGTGG-GTAGAAACTTC  48
      |||||| ||||||||||| ||||||| ||||||||||| |||||||||||
seq2  CAGAAG-AAAGCTAGGTTAAGCCCCA-GCATTCTGTGGAGTAGAAACTTC  48

seq1  CTCCTCTAGTAGGAGAAACTGCTC-TAAAGGAAGAAGGGTAATTTATA-T  96
      ||||||||||| ||| |||||||| ||||||||||||||||||||||| |
seq2  CTCCTCTAGTA-GAG-AACTGCTCTTAAAGGAAGAAGGGTAATTTATATT  96

seq1  ACATAGCAAGGCCAATCTG-CCCCACATCTTAGTCACTGCCTGCCTACTT  145
      ||||||||||||||||||| ||||||||| ||||||||||||||||||||
seq2  ACATAGCAAGGCCAATCTGCCCCCACATC-TAGTCACTGCCTGCCTACTT  145

seq1  GAGACATCCTGGGAAATCCCAGTTACATGGAAGCCAATAAAAGTTAAAAT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATCCTGGGAAATCCCAGTTACATGGAAGCCAATAAAAGTTAAAAT  195

seq1  CACACTTCTCATGCATCCTTATTCTGTGTGGTTAACATACAGTCACTTCT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTCTCATGCATCCTTATTCTGTGTGGTTAACATACAGTCACTTCT  245

seq1  GCTGGAGTCTAAGGAGAACTTGTTATTATTTTCTACCGCGAGTCAACAGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGTCTAAGGAGAACTTGTTATTATTTTCTACCGCGAGTCAACAGA  295

seq1  GACATAGGTTTTCCAAAGCTTGCCCGTTCTCATCGTGAAAGGCACTATAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGGTTTTCCAAAGCTTGCCCGTTCTCATCGTGAAAGGCACTATAA  345

seq1  GAGCTTTTCTTTCTCTCTTTTTCCTTCTGCTTTACAAGACTCTCAGAAAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTTTCTTTCTCTCTTTTTCCTTCTGCTTTACAAGACTCTCAGAAAA  395

seq1  ACAGCTTCCTTGTCTTCCCAGGACATGTCTGGACTGAGTGCGGCTGGAGC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTCCTTGTCTTCCCAGGACATGTCTGGACTGAGTGCGGCTGGAGC  445

seq1  TTGCATGGAGCACACAGAGGTAAGAGCATGTGTCAGGTTAAGGTGGCTAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGGAGCACACAGAGGTAAGAGCATGTGTCAGGTTAAGGTGGCTAT  495

seq1  ACTCAGAGCCAAGAACACGATGATAGAGGGGTCAAAGAGTAGAGAACTTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAGCCAAGAACACGATGATAGAGGGGTCAAAGAGTAGAGAACTTC  545

seq1  AGTAGCTGAACCACCTTCTTCAATTGAGACCTGCTCAGAATTTGAACCAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTGAACCACCTTCTTCAATTGAGACCTGCTCAGAATTTGAACCAG  595

seq1  TATTATTTGACAAATGAAAAGTCACTGGCTTTGAACTCACTGAGTTGGGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTGACAAATGAAAAGTCACTGGCTTTGAACTCACTGAGTTGGGC  645

seq1  TGCTTCTACTAAATGACAGGACCACATCTGCACAGTTTCCTTTTCCTATG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTACTAAATGACAGGACCACATCTGCACAGTTTCCTTTTCCTATG  695

seq1  TGATTTTGTTCTGTAGAAGAAGTTAGTTCAGTGTAAAGTCTAAAACATGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTGTTCTGTAGAAGAAGTTAGTTCAGTGTAAAGTCTAAAACATGT  745

seq1  ACTGTAAAGATGTGATTAGAAATAAGATATTTAGCAGTAAAAGACTTATA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAAAGATGTGATTAGAAATAAGATATTTAGCAGTAAAAGACTTATA  795

seq1  ACATTAATATATTCAACTGGTGCTATAATTTGTTTCAGCTATTACAAAAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAATATATTCAACTGGTGCTATAATTTGTTTCAGCTATTACAAAAA  845

seq1  ACATTCACTATTTCAATGAATTCATTATTATGCTTTCTTAGTTTTAGTAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCACTATTTCAATGAATTCATTATTATGCTTTCTTAGTTTTAGTAT  895

seq1  ATTTTTATTCATTTATTTTAAATGTGTGCATACACATATGCCACAGAGTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATTCATTTATTTTAAATGTGTGCATACACATATGCCACAGAGTG  945

seq1  ACTGTGGAGGCCAGAAGACTGACTGCCTGCCAATGATAGGCCTTTCCTTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGAGGCCAGAAGACTGACTGCCTGCCAATGATAGGCCTTTCCTTC  995

seq1  CACGGTGTGGGTCCCAGAGATCAAATTCAGTTATTTGTCTCAGTGGCCTG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTGTGGGTCCCAGAGATCAAATTCAGTTATTTGTCTCAGTGGCCTG  1045

seq1  TGAATTACCCACTCTGCCAACTTGCTGGATTATCTCAAAGTCTTCTTAAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTACCCACTCTGCCAACTTGCTGGATTATCTCAAAGTCTTCTTAAA  1095

seq1  GAGTTGCCCAAGACATAATGAGAAACTAAGTGGAATTC  1133
      ||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGCCCAAGACATAATGAGAAACTAAGTGGAATTC  1133

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information