MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-271G19
Chromosome	6 (Build37)
Map Location	44,079,979 - 44,081,167
singlet/doublet	singlet
Overlap gene	none
Upstream gene	GA_x5J8B7W6337-1221999-1222591, Olfr438, Olfr437, Olfr13, GA_x5J8B7W6337-1270568-1271367, Olfr435, Olfr434, LOC665745, Olfr47, Arhgef5, Nobox, Tpk1, LOC665747, LOC546897, LOC665779
Downstream gene	LOC100040210, Cntnap2
Link	Open Mouse BAC browser

Click to get alignment info.

name	GA_x5J8B7W6337-1221999-1222591 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:257779
definition	note : olfactory receptor GA_x5J8B7W6337-1221999-1222591 pseudo : _no_value

name	Olfr438 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258648 MGI:3030272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr437 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258293 MGI:3030271
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18310 MGI:104812
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	GA_x5J8B7W6337-1270568-1271367 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:257778
definition	note : olfactory receptor GA_x5J8B7W6337-1270568-1271367 pseudo : _no_value

name	Olfr435 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258647 MGI:3030269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr434 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258366 MGI:3030268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665745 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Olfr47 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18346 MGI:1333821
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arhgef5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54324 MGI:1858952
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 60 ESTs, 5 Proteins

name	Nobox (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18291 MGI:108011
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:29807 MGI:1352500
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665747 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins pseudo : _no_value

name	LOC546897 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546897
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC665779 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665779
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 600 ESTs, 10 Proteins pseudo : _no_value

name	LOC100040210 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040210
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Cntnap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66797 MGI:1914047
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Olfr438 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33238917 GeneID:258648 MGI:3030272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 438 transcript_id : NM_146654.1

name	Olfr437 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129692 GeneID:258293 MGI:3030271
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 437 transcript_id : NM_146296.1

name	Olfr13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22203790 GeneID:18310 MGI:104812
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 13 transcript_id : NM_146652.1

name	Olfr435 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33238911 GeneID:258647 MGI:3030269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 435 transcript_id : NM_146653.1

name	Olfr434 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129564 GeneID:258366 MGI:3030268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 434 transcript_id : NM_146369.1

name	Olfr47 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22203776 GeneID:18346 MGI:1333821
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 47 transcript_id : NM_146370.1

name	Arhgef5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255069 GeneID:54324 MGI:1858952
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 60 ESTs, 5 Proteins product : Rho guanine nucleotide exchange factor (GEF) 5 transcript_id : XM_001481282.1

name	Nobox (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351686 GeneID:18291 MGI:108011
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NOBOX oogenesis homeobox transcript_id : NM_130869.2

name	Tpk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365527 GeneID:29807 MGI:1352500
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thiamine pyrophosphokinase transcript_id : NM_013861.2

name	Cntnap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52138537 GeneID:66797 MGI:1914047
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : contactin associated protein-like 2 transcript_id : NM_001004357.1

name	Olfr438 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33238918 CCDS:CCDS20087.1 GeneID:258648 MGI:3030272
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2P3E9-4404793-4403861; olfactory receptor MOR261-4 product : olfactory receptor 438 protein_id : NP_666865.1

name	Olfr437 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129693 CCDS:CCDS20088.1 GeneID:258293 MGI:3030271
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2P3E9-4391088-4390156; olfactory receptor MOR261-11 product : olfactory receptor 437 protein_id : NP_666408.1

name	Olfr13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22203791 CCDS:CCDS20089.1 GeneID:18310 MGI:104812
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : olfactory receptor MOR261-6; GA_x6K02T2P3E9-4384160-4383228; odorant receptor product : olfactory receptor 13 protein_id : NP_666863.1

name	Olfr435 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33238912 CCDS:CCDS20090.1 GeneID:258647 MGI:3030269
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2P3E9-4356476-4355535; olfactory receptor MOR261-5 product : olfactory receptor 435 protein_id : NP_666864.1

name	Olfr434 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129565 CCDS:CCDS20091.1 GeneID:258366 MGI:3030268
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2P3E9-4341246-4340281; olfactory receptor MOR261-10 product : olfactory receptor 434 protein_id : NP_666481.1

name	Olfr47 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22203777 CCDS:CCDS20092.1 GeneID:18346 MGI:1333821
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2P3E9-4322325-4321360; olfactory receptor MOR261-9 product : olfactory receptor 47 protein_id : NP_666482.1

name	Arhgef5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255070 GeneID:54324 MGI:1858952
definition	codon_start : 1 exception : unclassified translation discrepancy note : overriding stop codons product : Rho guanine nucleotide exchange factor (GEF) 5 protein_id : XP_001481332.1 transl_except : (pos:43222314..43222316,aa:OTHER) transl_except : (pos:43222365..43222367,aa:OTHER) transl_except : (pos:43222374..43222376,aa:OTHER) transl_except : (pos:43222398..43222400,aa:OTHER) transl_except : (pos:43222485..43222487,aa:OTHER) transl_except : (pos:43222488..43222490,aa:OTHER) transl_except : (pos:43222506..43222508,aa:OTHER) transl_except : (pos:43222635..43222637,aa:OTHER) transl_except : (pos:43222671..43222673,aa:OTHER) transl_except : (pos:43222716..43222718,aa:OTHER) transl_except : (pos:43222734..43222736,aa:OTHER) transl_except : (pos:43222779..43222781,aa:OTHER) transl_except : (pos:43223025..43223027,aa:OTHER) transl_except : (pos:43223049..43223051,aa:OTHER) transl_except : (pos:43223202..43223204,aa:OTHER) transl_except : (pos:43223211..43223213,aa:OTHER) transl_except : (pos:43223262..43223264,aa:OTHER) transl_except : (pos:43223322..43223324,aa:OTHER) transl_except : (pos:43223352..43223354,aa:OTHER) transl_except : (pos:43223355..43223357,aa:OTHER) transl_except : (pos:43223373..43223375,aa:OTHER) transl_except : (pos:43223412..43223414,aa:OTHER) transl_except : (pos:43223421..43223423,aa:OTHER) transl_except : (pos:43223442..43223444,aa:OTHER) transl_except : (pos:43223550..43223552,aa:OTHER) transl_except : (pos:43223649..43223651,aa:OTHER) transl_except : (pos:43223778..43223780,aa:OTHER) transl_except : (pos:43224081..43224083,aa:OTHER) transl_except : (pos:43224207..43224209,aa:OTHER) transl_except : (pos:43224279..43224281,aa:OTHER) transl_except : (pos:43224378..43224380,aa:OTHER) transl_except : (pos:43224426..43224428,aa:OTHER) transl_except : (pos:43224486..43224488,aa:OTHER) transl_except : (pos:43224516..43224518,aa:OTHER) transl_except : (pos:43224528..43224530,aa:OTHER) transl_except : (pos:43224555..43224557,aa:OTHER) transl_except : (pos:43224561..43224563,aa:OTHER) transl_except : (pos:43224603..43224605,aa:OTHER) transl_except : (pos:43224696..43224698,aa:OTHER) transl_except : (pos:43224810..43224812,aa:OTHER) transl_except : (pos:43225056..43225058,aa:OTHER) transl_except : (pos:43225164..43225166,aa:OTHER) transl_except : (pos:43225227..43225229,aa:OTHER) transl_except : (pos:43226839..43226841,aa:OTHER) transl_except : (pos:43227028..43227030,aa:OTHER) transl_except : (pos:43229455..43229457,aa:OTHER) transl_except : (pos:43229488..43229490,aa:OTHER) transl_except : (pos:43229494..43229496,aa:OTHER) transl_except : (pos:43230174..43230176,aa:OTHER) transl_except : (pos:43230228..43230230,aa:OTHER) transl_except : (pos:43230309..43230311,aa:OTHER) transl_except : (pos:43230312,aa:OTHER) transl_except : (pos:43230597..43230598,aa:OTHER) transl_except : (pos:43230635..43230637,aa:OTHER) transl_except : (pos:43230680..43230682,aa:OTHER) transl_except : (pos:43230957..43230959,aa:OTHER) transl_except : (pos:43231017..43231019,aa:OTHER) transl_except : (pos:43231423..43231425,aa:OTHER) transl_except : (pos:43231483..43231485,aa:OTHER) transl_except : (pos:43233207..43233209,aa:OTHER) transl_except : (pos:43233222..43233224,aa:OTHER) transl_except : (pos:43233255..43233257,aa:OTHER) transl_except : (pos:43233267..43233269,aa:OTHER) transl_except : (pos:43233957..43233959,aa:OTHER) transl_except : (pos:43237599..43237601,aa:OTHER) transl_except : (pos:43237617..43237619,aa:OTHER) transl_except : (pos:43238628..43238630,aa:OTHER) transl_except : (pos:43238673..43238675,aa:OTHER) transl_except : (pos:43238754..43238756,aa:OTHER)

name	Nobox (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21536236 CCDS:CCDS20093.1 GeneID:18291 MGI:108011
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0001541 - ovarian follicle development [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : newborn ovary homeobox product : OG2 homeobox protein_id : NP_570939.1

name	Tpk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305589 GeneID:29807 MGI:1352500
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004788 - thiamin diphosphokinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0009229 - thiamin diphosphate biosynthesis [Evidence IEA]; GO:0006772 - thiamin metabolism [Evidence IDA] codon_start : 1 product : thiamin pyrophosphokinase protein_id : NP_038889.1

name	Cntnap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52138538 GeneID:66797 MGI:1914047
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform a is encoded by transcript variant 1 product : contactin associated protein-like 2 isoform a protein_id : NP_001004357.1

name	LOC665745 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665745
definition	number : 1 pseudo : _no_value

name	LOC665745 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665745
definition	number : 2 pseudo : _no_value

name	LOC546897 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546897
definition	number : 4 pseudo : _no_value

name	LOC546897 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546897
definition	number : 3 pseudo : _no_value

name	LOC546897 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546897
definition	number : 2 pseudo : _no_value

name	LOC546897 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546897
definition	number : 1 pseudo : _no_value

name	LOC100040210 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040210
definition	number : 1 pseudo : _no_value

name	LOC100040210 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040210
definition	number : 2 pseudo : _no_value

name	LOC100040210 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040210
definition	number : 3 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:492945
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:492929
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:492687
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:489402
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:494966
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:495340
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179367
definition	standard_name : AW495314

name	(CDS detail)
type	STS
link
xref	UniSTS:235430
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130901
definition	standard_name : D6Mit350

name	(CDS detail)
type	STS
link
xref	UniSTS:130978
definition	standard_name : D6Mit76

name	(CDS detail)
type	STS
link
xref	UniSTS:224372
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130750
definition	standard_name : D6Mit207

name	LOC665747 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255080 GeneID:665747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : similar to 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase pseudo : _no_value transcript_id : XR_032342.1

name	LOC665779 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255081 GeneID:665779
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 600 ESTs, 10 Proteins product : similar to 60S ribosomal protein L7a (Surfeit locus protein 3) pseudo : _no_value transcript_id : XR_032354.1

clone name	MSMg01-233M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362F11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-520P20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-302A15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-497A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448C05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-237O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429E11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-187K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531C15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-178L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152E05
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-271G19.b	B6Ng01-271G19.g
ACC	GA073510	GA073511
length	984	1,155
definition	B6Ng01-271G19.b	B6Ng01-271G19.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattccagtttggacaacaaaggcaaaagatgattttagaacatataag tatgtcacataggagctaagtgtatgtacaacacacacacatatacatgc catgcacatgtgcacacacactcatgcatgcacattcataggcacacatg cacacattatgctactttgatcaagtggccaaggtaagtcctctagattc catgaacccttgatgtgactagggggacatgttgactctgcagcttcatt cctccccaaaattcaaaacctgaggaaaatatcagacaaatctaagtgga tttgtgcaaaataactaaatagtacttctcaaagctttgtatatcactca aacctaggatatgcttaagaaatggcagagtaaagagcatgctgatgaga catgaaaactaagtcgagcatggcacctgtataagattctagaacagata aattacagaaggtaaaaattaaggacatcagaataagtatggactacaca gtaacttatcattagtggttgactcattgtaatgaatcgtccatacaaac ataaaacatgaacaaatatggaactggtgtgtactttgaacaagaattgc ttactgacaggagcctgatatagctggatactgagaggctttccagagtg acaaatacagaggcagatgcttgcagccaaccattggactgagcacggag gccccagtggaggagttagagaaagggctgagctgaaggagtttgcaacc ccataaaaagaacaacaatatcaaccaaccagacccaccccccagagctc ccagggactaagccaccaaccaaagagtacacatggagagacccatggag gttccagctgcatatgtagcagaggatggccttgacaagcatcaatgaga ggataggcccttggtcctgtgaaggcttgatgccccagtgtagggaatta cggggcagggaggtaggagtagatagggtgggtg	gaattcactagttcatcaggggcattcatagtttatacaagaacctggtg aactgagacctttgaaatatctctgttcctttaatcagacttcaatagca aacatacatttgctcccaccgagctcctagtgaaatgctatgtttttctc aaaaaaaaacaaaaacaaaaaaaaaaacaaaaaacaaaaaacacaaaaca aaaaaaacaaacaaaaaaaccccaccaacctgacatttctgaaatatttt ggtttgaactaggatgctgtagaaagtagttggatacccacagctttata tggagcagtgttcttcatgtgcagtgttttattgaggtcttagagtgtca tccaagcaattttggcttcctttgatgacactgtgattatgtgtctttgg aacatttgatgcttttcttttttacagaaagaaaagaaaaaaaaaaaaaa gaaagaattttatcttacatgaatgaacttcctccacctctgagataaag tttacaaatttcatattcactcagagaaacaaggagagtgtatcattacc tcccagaccttataaactgaatcatgcacaacagaagatgtgcacagtaa cagtctttaagggtgcctgacacttttctctgtttgtttaattaccactg tttgtcctttagacatatgagatatttaatatttatcaaagaccagattt gaaatgagccccagttttccatgttagtgccatttaattcaaagaggtgt tctgttttgcttctcagttcacctgtattagatttactttgccaagaagc agaacattttaactctaacagtagtgagaccttgaccaatgagggaaaat gtttactttttttactgaatgaactcccatggatgacgatcaactttgac aataaacacaagaattttataagaggaatttaaaaataaaatttgctttt atgaaaggctagtacattggcatgtgacacagcatcagatagatgatgag catgagtccactcatacttttattcatccatatagatatatcatcatata tattgatcttgctacctgagatagttatgtagacacaaggatcttatgga acttgaattaggccagtaatctcgaattgggttgatgattgcagtaattt caacc
quality values	Open. Hide. 62 41 30 33 62 62 39 21 62 62 62 62 62 62 44 35 41 62 44 44 62 62 62 62 62 62 62 62 62 62 59 49 62 39 30 34 27 25 21 18 27 27 39 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 59 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 56 34 49 34 28 31 28 28 28 38 39 59 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 59 59 62 62 59 62 54 59 62 59 62 62 62 62 62 62 62 54 42 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 59 62 62 62 62 59 59 62 62 62 62 54 54 54 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 54 62 62 62 62 54 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 54 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 42 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 52 58 58 58 54 58 58 58 58 58 54 58 58 58 58 58 58 54 58 54 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 54 44 58 58 58 54 58 58 48 49 58 54 58 41 42 58 58 58 58 58 54 54 58 58 58 51 50 54 58 58 50 58 58 58 58 51 46 52 51 51 51 58 58 58 58 42 41 51 49 58 58 45 34 45 37 49 35 58 58 54 50 50 50 53 58 32 49 58 44 42 46 58 58 53 51 50 53 52 44 35 54 50 53 53 58 32 51 50 58 58 58 54 42 39 53 49 32 51 44 43 35 51 49 41 44 54 28 51 58 54 31 51 50 50 49 58 26 15 44 40 58 58 58 41 42 49 44 44 44 18 49 49 13 54 52 52 39 53 39 54 54 39 37 54 49 37 53 50 51 11 54 51 36 29 50 11 49 51 24 51 51 33 32 44 32 37 40 42 39 42 32 47 24 54 54 54 54 40 53 41 38 34 27 27 14 46 44 38 41 41 42 45 37 33 40 51 35 32 29 34 25 12 46 47 29 36 40 40 40 40 36 32 34 39 18 36 53 29 52 46 32 22 53 49 20 26 40 28 41 31 45 45 33 30 51 30 42 30 34 29 51 51 31 38 21 31 36 31 31 40 31 42 31 46 28 23 51 26 24 15 46 37 25 30 28 42 32 15 36 28 43 34 33 31 29 31 32 32 38 25 31 27 31 42 32 31 31 34 41 17 46 9 28 25 24 31 39 27 36 31 31 29 19 16 29 37 24 31 31 34 33 30 31 31 32 37 19 39 16 26 22 19 31 36 36 18 33 29 24 31 31 35 26 31 31 32 42 27 27 36 27 25 16 11 22 29 26 30 26 32 31 28 24 29 28 16 27 31 35 26 28 47 38 19 25 19 25 27 9 4 23 43 26 22 32 10 48 24 4 4 17 23 29 15 16 24 14 12 8 14 23 13 13 11 34 14 23 14 43 19 15 10	Open. Hide. 62 47 44 47 62 47 59 59 59 59 59 62 62 47 39 62 62 46 56 62 59 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 54 62 59 62 59 59 54 59 59 62 49 54 54 59 59 62 62 62 62 62 62 49 49 54 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 59 59 62 54 62 62 42 62 59 54 62 59 62 62 62 62 62 54 59 62 54 54 54 49 49 62 62 62 62 59 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 54 62 62 62 54 56 59 56 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 54 54 62 62 62 62 62 62 62 54 54 54 54 54 62 62 62 62 62 62 62 54 54 62 54 54 62 62 62 62 54 59 59 56 62 62 56 56 59 54 56 56 62 59 62 56 56 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 54 54 62 62 62 62 59 59 48 54 62 59 62 62 62 56 62 62 62 62 54 62 62 62 62 62 59 62 59 59 46 49 62 62 59 62 59 62 62 62 62 59 59 59 51 50 62 59 62 62 62 49 62 59 59 62 59 62 59 56 56 50 62 59 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 51 49 56 56 62 59 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 49 49 62 62 62 62 44 62 62 62 62 56 62 62 62 44 47 47 62 62 46 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 56 62 45 56 62 56 56 56 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 56 62 62 56 56 62 62 47 62 62 62 62 62 62 62 62 52 52 47 52 44 48 52 48 47 62 52 52 46 47 62 52 52 62 43 43 54 54 52 52 50 52 45 33 36 47 52 52 54 54 52 52 43 52 52 47 46 52 54 46 46 48 48 52 52 52 47 45 37 52 52 52 32 26 54 30 52 47 43 54 43 52 54 58 48 40 44 52 37 47 42 52 54 52 52 48 48 50 48 52 52 52 52 42 47 34 41 35 52 52 52 54 52 52 52 52 52 52 54 54 49 48 49 37 47 47 47 47 47 49 58 51 51 47 41 47 50 51 34 48 50 58 58 47 50 53 53 47 51 48 49 48 51 54 53 58 50 46 42 42 30 58 28 39 52 51 51 50 58 44 32 32 47 49 58 58 37 42 40 52 50 58 46 51 49 51 50 58 31 50 48 50 49 37 49 40 27 51 48 58 44 54 39 44 40 41 42 50 58 50 46 30 51 37 31 50 41 49 53 58 32 47 31 31 47 58 35 40 43 35 35 43 58 40 38 50 50 35 58 50 39 45 38 41 39 37 39 25 49 44 35 52 54 32 31 41 53 35 51 51 54 40 32 37 54 36 33 29 40 28 21 29 51 39 33 41 32 35 44 40 38 25 44 54 35 40 24 22 51 31 33 51 44 33 45 31 42 25 51 32 42 45 31 52 27 54 54 32 37 37 37 42 45 40 36 32 33 47 32 36 35 32 34 32 51 26 35 39 29 41 24 33 18 53 37 29 32 28 52 32 39 34 33 28 39 34 53 42 31 31 31 16 42 33 18 17 25 51 51 39 32 30 35 43 39 39 26 24 25 32 31 33 39 32 36 39 31 34 34 13 15 23 31 31 26 27 27 29 31 24 43 42 33 48 31 37 48 48 31 30 43 33 48 26 31 34 46 48 46 46 46 47 18 23 31 34 36 25 31 32 37 29 20 29 31 36 48 31 29 30 42 42 30 23 29 31 13 18 37 33 34 25 29 31 37 48 31 32 36 22 18 21 19 33 41 22 17 16 27 19 28 28 24 12 20 44 43 24 26 16 22 22 8 35 21 18 22 22 21 47 26 15 48 43 43 27 27 22 43 43 15 13 43 15 15 22 37 48 48 22 21 19 18 20 47 17 24 20 21 34 32 22 11 29 6 17 29 23 10 25 12 18 27 20 11 23 27 24 17 18 17 13 14 27 6 11 5 3 4 5 27 11 29 13 22 21 17 28 29 20 26 14 27 5 4 7 7 17 9 8 10 30 10 15 13 14 20 23 38 38 9 16 8 21 21 9 18 16 24 5 4 5 23 5 5 18 5 13 3 5 5 16 12 13 23 5 12 4 3 2 1 3 3 7 11 21 16 21 6 11 4 2 1 2 5 6 3 1 5 3 3 5 2 1 3 18 13 6 8 3 2 5 22 5 5 14 7 14 5 15 15 11 8 16 23 9 6 11 17 6 7 6 14 15 7 6 6 9 21 6 24 23 5 7 22 2 3 1 4 6 10 4 2 1 3 5 4 5 14 30 4 13 6 5 2 4 5 2 2 2 6 6 6 8 2 3 6 13 30 17 5 6 6 4 12

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_44079979_44081167
seq2: B6Ng01-271G19.g_64_1218

seq1  GAATTCACTAGTTCATCAGGGGCATTCATAGTTTATACAAGAACCTGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAGTTCATCAGGGGCATTCATAGTTTATACAAGAACCTGGTG  50

seq1  AACTGAGACCTTTGAAATATCTCTGTTCCTTTAATCAGACTTCAATAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGACCTTTGAAATATCTCTGTTCCTTTAATCAGACTTCAATAGCA  100

seq1  AACATACATTTGCTCCCACCGAGCTCCTAGTGAAATGCTATGTTTTTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATACATTTGCTCCCACCGAGCTCCTAGTGAAATGCTATGTTTTTCTC  150

seq1  AAAAAAAAACAAAAACAAAAAAAAAAACAAAAAACAAAAAACACAAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAACAAAAACAAAAAAAAAAACAAAAAACAAAAAACACAAAACA  200

seq1  AAAAAAACAAACAAAAAAACCCCACCAACCTGACATTTCTGAAATATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACAAACAAAAAAACCCCACCAACCTGACATTTCTGAAATATTTT  250

seq1  GGTTTGAACTAGGATGCTGTAGAAAGTAGTTGGATACCCACAGCTTTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGAACTAGGATGCTGTAGAAAGTAGTTGGATACCCACAGCTTTATA  300

seq1  TGGAGCAGTGTTCTTCATGTGCAGTGTTTTATTGAGGTCTTAGAGTGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCAGTGTTCTTCATGTGCAGTGTTTTATTGAGGTCTTAGAGTGTCA  350

seq1  TCCAAGCAATTTTGGCTTCCTTTGATGACACTGTGATTATGTGTCTTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGCAATTTTGGCTTCCTTTGATGACACTGTGATTATGTGTCTTTGG  400

seq1  AACATTTGATGCTTTTCTTTTTTACAGAAAGAAAAGAAAAAAAAAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTGATGCTTTTCTTTTTTACAGAAAGAAAAGAAAAAAAAAAAAAA  450

seq1  GAAAGAATTTTATCTTACATGAATGAACTTCCTCCACCTCTGAGATAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATTTTATCTTACATGAATGAACTTCCTCCACCTCTGAGATAAAG  500

seq1  TTTACAAATTTCATATTCACTCAGAGAAACAAGGAGAGTGTATCATTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAATTTCATATTCACTCAGAGAAACAAGGAGAGTGTATCATTACC  550

seq1  TCCCAGACCTTATAAACTGAATCATGCACAACAGAAGATGTGCACAGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGACCTTATAAACTGAATCATGCACAACAGAAGATGTGCACAGTAA  600

seq1  CAGTCTTTAAGGGTGCCTGACACTTTTCTCTGTTTGTTTAATTACCACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTTAAGGGTGCCTGACACTTTTCTCTGTTTGTTTAATTACCACTG  650

seq1  TTTGTCCTTTAGACATATGAGATATTTAATATTTATCAAAGACCAGATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCTTTAGACATATGAGATATTTAATATTTATCAAAGACCAGATTT  700

seq1  GAAATGAGCCCCAGTTTTCCATGTTAGTGCCATTTAATTCAAAGAGGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAGCCCCAGTTTTCCATGTTAGTGCCATTTAATTCAAAGAGGTGT  750

seq1  TCTGTTTTGCTTCTCAGTTCACCTGTATTAGATTTACTTTGCCAAGAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTGCTTCTCAGTTCACCTGTATTAGATTTACTTTGCCAAGAAGC  800

seq1  AGAACATTTTAACTCTAACAGTAGTGAGACCTTGACCAATGAGGGAAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATTTTAACTCTAACAGTAGTGAGACCTTGACCAATGAGGGAAAAT  850

seq1  GTTTACTTTTTTTACTGAATGAACTCCCATGGATGACGATCAACTTTGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTTTTTTTACTGAATGAACTCCCATGGATGACGATCAACTTTGAC  900

seq1  AATAAACACAAGAAATTTTATAAGAGGAATTTAAAAATAAAATTTGCTTT  950
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AATAAACACAAG-AATTTTATAAGAGGAATTTAAAAATAAAATTTGCTTT  949

seq1  TATGAAAGGCTAGTAACATTGGCATGTGACACAGCAATCAGGATAAGATG  1000
      |||||||||||||| |||||||||||||||||||| |||| ||| |||||
seq2  TATGAAAGGCTAGT-ACATTGGCATGTGACACAGC-ATCA-GAT-AGATG  995

seq1  ATGAGCATTGAAGTCACTTCATACTTTTATTCATCCATATTAGATAATAT  1050
      ||||||||   ||||   ||||||||||||||||||||| ||||| ||||
seq2  ATGAGCAT--GAGTCCACTCATACTTTTATTCATCCATA-TAGAT-ATAT  1041

seq1  CATCATTAATTATAATGATCTTGTCTAACTTTAAGGATA-ATTTATGGTT  1099
      ||||||    |||| |||||||| ||| ||     || | | |||||   
seq2  CATCAT---ATATATTGATCTTG-CTACCT-----GAGATAGTTATG---  1079

seq1  AAGACACAAAGGATCTTATGGGACTTTGATATTAGGGCAAGTTTATATCT  1149
       |||||| ||||||||||||| || |||| |||| ||| |||    ||| 
seq2  TAGACAC-AAGGATCTTATGGAAC-TTGA-ATTA-GGCCAGT---AATC-  1121

seq1  TCAAATATGGTTGTGATGTAGTTGCCAGTAATTTTCAACC  1189
      || |||  |||  |||||   ||| |||||| ||||||||
seq2  TCGAATTGGGT--TGATG--ATTG-CAGTAA-TTTCAACC  1155

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information