BAC Information

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BAC

Clone NameB6Ng01-271O10
Chromosome6 (Build37)
Map Location 82,765,953 - 82,766,507
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC232143, 1700009C05Rik, AW146020, Mrpl19, Tmem166, EG622198, Tacr1, Pole4, LOC100043412, Hk2
Downstream geneEG622318, Sema4f, D6Mm5e, Dok1, Loxl3, Htra2, Aup1, Dqx1, Tlx2, Pcgf1, Lbx2, A230058J24Rik, Mrpl53, Gcs1, Wbp1, Znhit4, Rtkn, Wdr54, 1700003E16Rik, Dctn1, C330016K18Rik, Mthfd2, Mobk1b, Bola3, D230004J03Rik, Dguok, Actg2, Stambp, LOC664956, Clec4f, Cd207, Vax2os2, Vax2os1, Vax2, Atp6v1b1, 1700124L16Rik, Ankrd53, Tex261, LOC665004, Nagk, Paip2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271O10.bB6Ng01-271O10.g
ACCGA073862GA073863
length1,212551
definitionB6Ng01-271O10.b B6Ng01-271O10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttccttccttcctttctttcttcctttttctttctttctttctt
ctctctctctctctctctctctctctctttctttctttcttttttttttt
ttgagacagggcttctctgcgtagctctggctatcctggaactcactttg
tagaccaagatggcctcaaactcagatatctgcctgcttctgcctcctga
gtgctgggattaaaggtgtgcaccactaccacctggctatagatacacat
ttctaaccgatattattgtccttcttctcacccttctcaagtatgatttc
atacaaattgtagcttgatgaattatttcctcttaatactagatatttca
ttttatcatctttttattttgaatgattttgaagaagctgaatctaaccc
ttgctcctccctttcattcctgttagtcctcttcatttcatgagtcagtt
ttgttcttactttattactttatgtcatgtatgcatatgattttatatat
ctgtataaagtccaagacccacaaatgagaaaatgtgacttttgtccttc
tggatctgacttaattcacttagataatcttgtgatgcattcattttcct
aaaaatgatgcaataagaggttatcttgtctatggttgaacaaagttcca
ctgtgaacatatatcaccttgtcatgcatccttctgttgagagacatcta
gactgactccataatttagctactgtggataatgatgcaataagagttgg
tgtggaccatctccgtggtctgttgcttatttggatgctccttgacttca
cttagaagtatattaggagcttcttccatttattacacattcctctgatt
attcttttaactttttttttgtgtgtgcgatttcctctaatttctctttt
actgaatccctcactggagaactggcattttccagaggagtccattgcct
tgatttcttcatgtctcttgtattttcttcattgtacttgtgcatttagg
gttaacccattgggtggatttaaaaggtcagctgcattttccaggttgag
gtgttgaagctggagttgtcattcccttcccaccgggtgaagggggtgtt
gattcagtagctggaactccagtctgtggctagggtgtccgggaccattc
ctaactccacttcgaagatgagacttgtcacctggtaggaagtcactcac
gcacttatgtgc
ttcttgaagttgtctgggtgcagaagtgcacacccctgcaatcctagcac
ctgggagaccgaggcagaaagaacgggtatgttcaaggtcagcctgggct
acaaatccagacttgtcacaaaacaaacaaatgagttggagggaaacaga
ggaagctcaaacagttgttgcagctgagtcctggattcaggcttggttcc
tgtcattatatgagttgcttttatttgttgtttcttttcttttcttttct
cttcttttcttttctctctctttttttttatttcttttaaaacagaataa
ctagaataaaataaatctcttagacaggaaagaatggaatttctccaggt
cattttctctcttctgttcttacctctcttctctcctcttctttcctccc
ttcttccttcctttctttctctcttcctctctctctctttttgttttgtt
ttgttttgtttttcgagacagggtttctctgtgtacccctggctgtcctg
taactcactttgaagaccaggctggccttgaactcagaaatctagcctgc
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_82765953_82766507
seq2: B6Ng01-271O10.g_69_624

seq1  GAATTCTTCTTGAAGTTGTCTGGGTGCAGAAGTGCACACCCCTGCAATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTGAAGTTGTCTGGGTGCAGAAGTGCACACCCCTGCAATCC  50

seq1  TAGCACCTGGGAGACCGAGGCAGAAAGAACGGGTATGTTCAAGGTCAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACCTGGGAGACCGAGGCAGAAAGAACGGGTATGTTCAAGGTCAGCC  100

seq1  TGGGCTACAAATCCAGACTTGTCACAAAACAAACAAATGAGTTGGAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTACAAATCCAGACTTGTCACAAAACAAACAAATGAGTTGGAGGGA  150

seq1  AACAGAGGAAGCTCAAACAGTTGTTGCAGCTGAGTCCTGGATTCAGGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGGAAGCTCAAACAGTTGTTGCAGCTGAGTCCTGGATTCAGGCTT  200

seq1  GGTTCCTGTCATTATATGAGTTGCTTTTATTTGTTGTTTCTTTTCTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCTGTCATTATATGAGTTGCTTTTATTTGTTGTTTCTTTTCTTTTC  250

seq1  TTTTCTCTTCTTTTCTTTTCTCTCTCTTTTTTTTTATTTCTTTTAAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTTCTTTTCTTTTCTCTCTCTTTTTTTTTATTTCTTTTAAAACA  300

seq1  GAATAACTAGAATAAAATAAATCTCTTAGACAGGAAAGAATGGAATTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAACTAGAATAAAATAAATCTCTTAGACAGGAAAGAATGGAATTTCT  350

seq1  CCAGGTCATTTTCTCTCTTCTGTTCTTACCTCTCTTCTCTCCTCTTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTCATTTTCTCTCTTCTGTTCTTACCTCTCTTCTCTCCTCTTCTTT  400

seq1  CCTCCCTTCTTCCTTCCTTTCTTTCTCTCTTCCTCTCTCTCTCTTTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTTCTTCCTTCCTTTCTTTCTCTCTTCCTCTCTCTCTCTTTTTGT  450

seq1  TTTGTTTTGTTTTGTTTTTCGAGACAGGGTTTCTCTGTGTACCCCTGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTGTTTTGTTTTTCGAGACAGGGTTTCTCTGTGTACCCCTGGCT  500

seq1  GTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCT-  549
      |||||| ||||||||||| ||||||||||||||| |||||||||||||| 
seq2  GTCCTGTAACTCACTTTGAAGACCAGGCTGGCCTTGAACTCAGAAATCTA  550

seq1  GCCTGC  555
      ||||||
seq2  GCCTGC  556