BAC Information

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BAC

Clone NameB6Ng01-272D22
Chromosome6 (Build37)
Map Location 73,370,284 - 73,371,401
singlet/doubletsinglet
Overlap geneOlfr210-ps1
Upstream geneGgcx, Mat2a, Sh2d6, Capg, Rbed1, Retsat, Tgoln1, LOC100038890, Tcf3, Kcmf1, Tmsb10, Dnahc6, Suclg1
Downstream gene4931417E11Rik, LOC100043338
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272D22.bB6Ng01-272D22.g
ACCGA074121GA074122
length1,1891,122
definitionB6Ng01-272D22.b B6Ng01-272D22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atttatccagaagatgccccaactggtatgaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataaggtacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccgtaatc
agcatccaaacgctgacaccattgcataccctagcaagattttattgaaa
ggacccagatgtagctatctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atgggaggagctagagaaagaacccaaaggagctaaagggatctgcaacc
atataggtggaacacattatgactacagtacccggagctctgactctagc
tgcatatgtaacaaagatggcctatcgcatcactggaaagagaggccatg
gacacgtaaacttgtatgccagtacaggggacgctagctaaggggaatga
tggttaggggaatggctccgctgacgctagagtacactg
gaattctcctttagtctgaggtcatcattgaagaattacagtctttctgg
taatgtcattgaagctctttttcaactgtttatttctgaaagtgtaaatg
aataagtctagtaatggggcaactgaggtattgaggacagccatcccctt
gctgaggacaactcctcttgatgaaggctttatgcacataaagatgcagc
ttctgtaagagatggagatgacaagtgtgtgggaagaacaaaatgccttc
ttcctctgctatgcagaagggatctttggaatggtcctgatgctgcacat
gtaggagagtctccagcaccatggcgactctcaaggtcatgattactaag
aaaaagcaaatagctccatcagccttgtgctagaacaagctatttctata
agggtcccatagtcacagcaatgatgtttgagcacatttgatgcacagaa
atccagtgactggtcaggatgatgggcaagaagatgattaggaagcaact
cagacaagagcagggaatcagcagagtgcagaccctgttgctcattatgg
tggcatagtgtagggattgggaggtggcaatgtagtaatcacaggtcata
gaagtcagagtccaaatctcagaggttccaaagaaaatggcaatgaagca
gccaacaaagttgatggtcttaatttctgtagagatgctgaagagcagct
gaggaataaaagtggatgtgagggagatttccaggaaggagaagctcctg
aagacgaagtgcatgggaacctggaagtgggactcatgcaatgtgaaggc
atcggtgttctgattccccccaatgctgagcatgtatgtgaggactggga
aataggaaaactgttttgaagtccctgctcacttgtgagtcccagccaaa
caaatatatagcaatgacactttggccacatagcaccaaggaagagatga
taaaagacatggctctgatggctgtcgatggtagagagtggggaagagtt
ccgcttgttgatacacagaagaaggtaaatatgtgtacgacgaagttcca
tgtaattttagatggatttttatttccttgcagaattgccagcagtcctc
tcccccattcgtctttgctagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_73370284_73371401
seq2: B6Ng01-272D22.g_65_1186

seq1  GAATTCTCCTTTAGTCTGAGGTCATCATTGAAGAATTACAGTCTTTCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTTAGTCTGAGGTCATCATTGAAGAATTACAGTCTTTCTGG  50

seq1  TAATGTCATTGAAGCTCTTTTTCAACTGTTTATTTCTGAAAGTGTAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCATTGAAGCTCTTTTTCAACTGTTTATTTCTGAAAGTGTAAATG  100

seq1  AATAAGTCTAGTAATGGGGCAACTGAGGTATTGAGGACAGCCATCCCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTCTAGTAATGGGGCAACTGAGGTATTGAGGACAGCCATCCCCTT  150

seq1  GCTGAGGACAACTCCTCTTGATGAAGGCTTTATGCACATAAAGATGCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGACAACTCCTCTTGATGAAGGCTTTATGCACATAAAGATGCAGC  200

seq1  TTCTGTAAGAGATGGAGATGACAAGTGTGTGGGAAGAACAAAATGCCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAAGAGATGGAGATGACAAGTGTGTGGGAAGAACAAAATGCCTTC  250

seq1  TTCCTCTGCTATGCAGAAGGGATCTTTGGAATGGTCCTGATGCTGCACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTGCTATGCAGAAGGGATCTTTGGAATGGTCCTGATGCTGCACAT  300

seq1  GTAGGAGAGTCTCCAGCACCATGGCGACTCTCAAGGTCATGATTACTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAGAGTCTCCAGCACCATGGCGACTCTCAAGGTCATGATTACTAAG  350

seq1  AAAAAGCAAATAGCTCCATCAGCCTTGTGCTAGAACAAGCTATTTCTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCAAATAGCTCCATCAGCCTTGTGCTAGAACAAGCTATTTCTATA  400

seq1  AGGGTCCCATAGTCACAGCAATGATGTTTGAGCACATTTGATGCACAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCCCATAGTCACAGCAATGATGTTTGAGCACATTTGATGCACAGAA  450

seq1  ATCCAGTGACTGGTCAGGATGATGGGCAAGAAGATGATTAGGAAGCAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTGACTGGTCAGGATGATGGGCAAGAAGATGATTAGGAAGCAACT  500

seq1  CAGACAAGAGCAGGGAATCAGCAGAGTGCAGACCCTGTTGCTCATTATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAAGAGCAGGGAATCAGCAGAGTGCAGACCCTGTTGCTCATTATGG  550

seq1  TGGCATAGTGTAGGGATTGGGAGGTGGCAATGTAGTAATCACAGGTCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATAGTGTAGGGATTGGGAGGTGGCAATGTAGTAATCACAGGTCATA  600

seq1  GAAGTCAGAGTCCAAATCTCAGAGGTTCCAAAGAAAATGGCAATGAAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAGAGTCCAAATCTCAGAGGTTCCAAAGAAAATGGCAATGAAGCA  650

seq1  GCCAACAAAGTTGATGGTCTTAATTTCTGTAGAGATGCTGAAGAGCAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACAAAGTTGATGGTCTTAATTTCTGTAGAGATGCTGAAGAGCAGCT  700

seq1  GAGGAATAAAAGTGGATGTGAGGGAGATTTCCAGGAAGGAGAAGCTCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAATAAAAGTGGATGTGAGGGAGATTTCCAGGAAGGAGAAGCTCCTG  750

seq1  AAGACGAAGTGCATGGGAACCTGGAAGTGGGACTCATGCAATGTGAAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACGAAGTGCATGGGAACCTGGAAGTGGGACTCATGCAATGTGAAGGC  800

seq1  ATCGGTGTTCTGATTCCCCCCAATGCTGAGCATGTATGTGAGGACT-GGA  849
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATCGGTGTTCTGATTCCCCCCAATGCTGAGCATGTATGTGAGGACTGGGA  850

seq1  AATAGGAAAACTGTTTTGAAGTCCCTGCTCACTTGTGAGTCCCAGCCAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGAAAACTGTTTTGAAGTCCCTGCTCACTTGTGAGTCCCAGCCAAA  900

seq1  CAAATATATAGCAATGACAC-TTGGCCACATAGCACCAAAGGAAGAGATG  948
      |||||||||||||||||||| |||||||||||||||| ||||||||||||
seq2  CAAATATATAGCAATGACACTTTGGCCACATAGCACC-AAGGAAGAGATG  949

seq1  ATAAAAGAACATGGCTCTGATGGCTGTCGGATGGTAGAAGAGGTGGGGAG  998
      ||||||| |||||||||||||||||||| |||||||| ||||  ||| ||
seq2  ATAAAAG-ACATGGCTCTGATGGCTGTC-GATGGTAG-AGAGTGGGGAAG  996

seq1  AGTTCGGCTTGTGAATACACAGAAG-AGGTAAATATGTGTAAGACAGAAG  1047
      ||||| ||||||  ||||||||||| ||||||||||||||| ||| ||||
seq2  AGTTCCGCTTGTTGATACACAGAAGAAGGTAAATATGTGTACGAC-GAAG  1045

seq1  TT-CAGGATATTTAAGATAGA-TTTTATT--CCTGCAGAATTG-CAGCAA  1092
      || || |  |||| |||| || |||||||  | |||||||||| |||| |
seq2  TTCCATGTAATTTTAGATGGATTTTTATTTCCTTGCAGAATTGCCAGC-A  1094

seq1  GTCCTC-CCCCAAATCGTC-TTGCTAGC  1118
      |||||| |||| | ||||| ||||||||
seq2  GTCCTCTCCCCCATTCGTCTTTGCTAGC  1122