BAC Information

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BAC

Clone NameB6Ng01-272F23
Chromosome6 (Build37)
Map Location 4,391,224 - 4,392,341
singlet/doubletsinglet
Overlap genenone
Upstream geneAI987662, Ccdc132, Calcr, LOC100039942, Tfpi2, Gngt1, Gng11, 4930528H21Rik, Bet1, LOC667381, LOC100039965
Downstream geneCol1a2, Casd1, Sgce, Peg10, LOC100040018, Ppp1r9a, Pon1, Pon3, Pon2, Asb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272F23.bB6Ng01-272F23.g
ACCGA074217GA074218
length1,1991,119
definitionB6Ng01-272F23.b B6Ng01-272F23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacccaactcattttatgaagccactattactctgatacctaaa
ccacagaaagatccaacaaagatagagaacttcagaccaatttctcttat
gaacatcgatgcaaaaattcttaataaaattctcgctaaccgaatccaag
aacacattaaagcaatcatccatcctgaccaagtaggttttattccaggg
atgcagggatggtttaatatacgaaaatccatcaatgtaatccattatat
aaacaaactcaaagacaaaaaccacatgatcatctcgttagatgcagaaa
aagcatttgacaagatccaacacccattcatgataaaagtgttggaaaga
tcaggaattcaaggcccatacctaaacatgataaaagcaatctacagcaa
accagtagccaacatcaaagtaaatggagagaagctggaagcaatcccac
taaaatcagggactagacaaggctgcccactttctccctaccttttcaac
atagtacttgaagtattagccagagcaattcgacaacaaaaggagatcaa
ggggatacaaattggaaaagaggaagtcaaaatatcactttttgcagatg
atatgatagtatatataagtgaccctaaaaattccaccagagaactccta
aacctgataaacagcttcggtgaagtagctggatataaaattaactcaaa
caagtcaatggcctttctctacacaaagaataaacaggctgagaaagaaa
ttagggaaacaacacccttctcaatagccacaaataatataaaatatcta
ggcgtgactctaacgaaaggaagtgaaagatctgtatgataaaaacttca
agtccctgaagaaagaaattaaagaagatctcagaagatggaaagatctc
ccatgctcatggattggcaggaccaacattgtaaaaatggctatcttgcc
gaagcaatctacagattcaatgcaatccccattaaaattccactcattct
tcacgaattagaatgagcatttgcaaattcatctgaataacaaaaaccga
gatagcaaaactcttctcaaggataaagaactctggtggatcacatgccc
tgaactaagccttacctacgagagcactgtgataaacctgcattgtacct
ggctataggacgaccagtggacccacattgggaaatatagaaaagtgtg
gaattcctctgagcaaacagtttatgaaggcacacaccaggaaatgaaga
agtcaccaccatctgcccaggcagtggaattctgaacaccagggaatggg
taagcagaaagtgcttctcagaggggcaatagcagacactggcaaaagaa
cctgttgtgattggtggtggcagtgagatttatggaagaagtcccaggtt
ccctcggaggaactcttaaccttctccagtggtccatcttattacatatc
ctatacactagcttcaaagccctgatggtcctctactgggtctgcagttc
ctaccagagccaagcccagaactggagcctagggggtttgttaattgaac
gactgacacattgcagttcagtctgtcacactgggagtaggaaaggggaa
cacatgtcttctacagattgcttacccattgatgaaggtcactgctgaaa
ctgttttgatttctgctgtgcatgtttggatggtttatgtcttcgtaaat
cttgtttgtttttcctgcctcctcccacatgcctctctgtttttagttac
ctttcctgccaaacaaagtaagtccagcagctgctctcatctggattgta
gtttgtattgctttataagggctgcccccatttggattgttgtttgtatt
gttttataacctgcgcccttctcttttaagttgtgtcaaggttttttgaa
aaatttacacaatagcagggaagagtcaaatggttccatgttgcattttg
aagttaataccaacttaggagcggagtgacatgcaggttacagagactac
cggagcactgtcttagatcaggatctacttctgtgctgtcctgatgcagg
agtgaggccttgggccatataactgtctcttcactcccttcccacctgca
acatgatggagacacctctcaaaggaattgtcgatcatctcactagatgt
gagcttgttgataccttgttcagagattcttgctgggtatcacctcaaac
aaaaatatgctgaggtggaagtctttactcgatgccttactatactgtgg
atgaatacccaggctggcttcttcatgatttttcttagaaacgtgcccaa
tgtgccagtctctagtaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_4391224_4392341
seq2: B6Ng01-272F23.g_65_1183 (reverse)

seq1  TTTACTAGAACCTGCCAACATGGGCCACG-TTCTCAGAAAAATCATGAAG  49
      |||||||||  ||| | |||| || |||| |||| |||||||||||||||
seq2  TTTACTAGAGACTGGC-ACATTGGGCACGTTTCTAAGAAAAATCATGAAG  49

seq1  AAGGCAGCCTGGGTTATCATCCACAAGTATAGTAA-GCATCGAGGTAAAG  98
      ||| ||||||||||  |||||||| |||||||||| ||||||| ||||||
seq2  AAGCCAGCCTGGGTATTCATCCAC-AGTATAGTAAGGCATCGA-GTAAAG  97

seq1  ACTTCCACCTCAGCATA-TTTTGTTTGAGGTGATACCCAGCAAGAATCTC  147
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACTTCCACCTCAGCATATTTTTGTTTGAGGTGATACCCAGCAAGAATCTC  147

seq1  TGAACAAGGTATCAACAAGCTCACATCTAGTGAGATGATCGACAATTCCT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAAGGTATCAACAAGCTCACATCTAGTGAGATGATCGACAATTCCT  197

seq1  TTGAGAGGTGTCTCCATCATGTTGCAGGTGGGAAGGGAGTGAAGAGACAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGGTGTCTCCATCATGTTGCAGGTGGGAAGGGAGTGAAGAGACAG  247

seq1  TTATATGG-CCAAGGCCTCACTCCTGCATCAGGACAGCACAGAAGTAGAT  296
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGGCCCAAGGCCTCACTCCTGCATCAGGACAGCACAGAAGTAGAT  297

seq1  CCTGATCTAAGACAGTGCTCCGGTAGTCTCTGTAACCTGCATGTCACTCC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATCTAAGACAGTGCTCCGGTAGTCTCTGTAACCTGCATGTCACTCC  347

seq1  GCTCCTAAGTTGGTATTAACTTCAAAATGCAACATGGAACCATTTGACTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTAAGTTGGTATTAACTTCAAAATGCAACATGGAACCATTTGACTC  397

seq1  TTCCCTGCTATTGTGTAAATTTTTCAAAAAACCTTGACACAACTTAAAAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGCTATTGTGTAAATTTTTCAAAAAACCTTGACACAACTTAAAAG  447

seq1  AGAAGGGCGCAGGTTATAAAACAATACAAACAACAATCCAAATGGGGGCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGCGCAGGTTATAAAACAATACAAACAACAATCCAAATGGGGGCA  497

seq1  GCCCTTATAAAGCAATACAAACTACAATCCAGATGAGAGCAGCTGCTGGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTATAAAGCAATACAAACTACAATCCAGATGAGAGCAGCTGCTGGA  547

seq1  CTTACTTTGTTTGGCAGGAAAGGTAACTAAAAACAGAGAGGCATGTGGGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTTGTTTGGCAGGAAAGGTAACTAAAAACAGAGAGGCATGTGGGA  597

seq1  GGAGGCAGGAAAAACAAACAAGATTTACGAAGACATAAACCATCCAAACA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAGGAAAAACAAACAAGATTTACGAAGACATAAACCATCCAAACA  647

seq1  TGCACAGCAGAAATCAAAACAGTTTCAGCAGTGACCTTCATCAATGGGTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGCAGAAATCAAAACAGTTTCAGCAGTGACCTTCATCAATGGGTA  697

seq1  AGCAATCTGTAGAAGACATGTGTTCCCCTTTCCTACTCCCAGTGTGACAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATCTGTAGAAGACATGTGTTCCCCTTTCCTACTCCCAGTGTGACAG  747

seq1  ACTGAACTGCAATGTGTCAGTCGTTCAATTAACAAACCCCCTAGGCTCCA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACTGCAATGTGTCAGTCGTTCAATTAACAAACCCCCTAGGCTCCA  797

seq1  GTTCTGGGCTTGGCTCTGGTAGGAACTGCAGACCCAGTAGAGGACCATCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGGCTTGGCTCTGGTAGGAACTGCAGACCCAGTAGAGGACCATCA  847

seq1  GGGCTTTGAAGCTAGTGTATAGGATATGTAATAAGATGGACCACTGGAGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTTGAAGCTAGTGTATAGGATATGTAATAAGATGGACCACTGGAGA  897

seq1  AGGTTAAGAGTTCCTCCGAGGGAACCTGGGACTTCTTCCATAAATCTCAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAAGAGTTCCTCCGAGGGAACCTGGGACTTCTTCCATAAATCTCAC  947

seq1  TGCCACCACCAATCACAACAGGTTCTTTTGCCAGTGTCTGCTATTGCCCC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACCACCAATCACAACAGGTTCTTTTGCCAGTGTCTGCTATTGCCCC  997

seq1  TCTGAGAAGCACTTTCTGCTTACCCATTCCCTGGTGTTCAGAATTCCACT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAAGCACTTTCTGCTTACCCATTCCCTGGTGTTCAGAATTCCACT  1047

seq1  GCCTGGGCAGATGGTGGTGACTTCTTCATTTCCTGGTGTGTGCCTTCATA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGGCAGATGGTGGTGACTTCTTCATTTCCTGGTGTGTGCCTTCATA  1097

seq1  AACTGTTTGCTCAGAGGAATTC  1118
      ||||||||||||||||||||||
seq2  AACTGTTTGCTCAGAGGAATTC  1119