BAC Information

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BAC

Clone NameB6Ng01-272H24
Chromosome6 (Build37)
Map Location 11,757,896 - 11,758,908
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667650, AA545190
Downstream geneNdufa4, Phf14, LOC100040844, EG625347, LOC435879, Thsd7a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272H24.bB6Ng01-272H24.g
ACCGA074311GA074312
length1,1891,026
definitionB6Ng01-272H24.b B6Ng01-272H24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacacccgtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgcccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc
aatggaggagctagagaaagtacccaaggagctaaagggatctcacccta
taggtggacacatatgactaacagtacccctgagctctgactctagctgc
atatgtatcaaagatggctagtcggcatcactgaagagaggtcatggaca
cgcagacttgtgtgcccgttacaggggactcagctacgggggaagtgaaa
ggctagccactctctaagcgtcagtacgtgagtacgtac
gaattcagacttagttgtggttaagtttgcaggaaatttttttatgtcca
ataaatgtgatcttagtctagaaagacctgtgactgcttgagacttagtt
gacttttaaaatcttcttcctactggaagtaagtagagataaagttactt
ggcctccaaggatggaacactcttcggtgacaaatgcagatggaatcaag
aggagcactgcaaaagaagggcagcattcagagtggaggatgagagagcc
acgctgagcacaattctctatatactggagttcagatctgtcctattcaa
agcactctctgactcaaatggagggaacacttgcaatatggacaaatgtc
atagtgtatatattactataaatcgtcatttctgtatgataaagcctatc
agggtttgtttgtccatggtttaccatgatgttagtatgtgggatgaaga
taattgattaccttctattaattaattctatgagtaaaaagaagttacat
ttagacttccccaacaccaccccaataaggtcatctctggagataaattt
tgtttaggtcacgaagaagagtctaaatctgatccagtgtctgggatctg
tgtgacacatcaccggatttcccagtctgtttaggttcatgaatgtgtgg
tagccatccctgattgcctttatctctctgtgtatctgtgtcttagtcac
tgttctattgcagtgaggagataccatgaccacagcaatgcttctaacag
agggcttgcttacaatttcataggttagtccattcctgtggtacagagca
tgacagcacatagcagacctgatgctggagaagaagctaaaagttctaca
ttctgatccacaggcagcagaaagagaaagagacctggtctggagtctgg
gcatggggcttttgaaacctcaaggaccacccccagtgacacactttctc
caacaaggccatacctactagtccttctcaattaatgggtactccctggg
tgactaagcatttacatggtaaggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_11757896_11758908
seq2: B6Ng01-272H24.g_64_1081

seq1  GAATTCAGACTTAGTTGTGGTTAAGTTTGCAGGAAATTTTTTTATGTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACTTAGTTGTGGTTAAGTTTGCAGGAAATTTTTTTATGTCCA  50

seq1  ATAAATGTGATCTTAGTCTAGAAAGACCTGTGACTGCTTGAGACTTAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGTGATCTTAGTCTAGAAAGACCTGTGACTGCTTGAGACTTAGTT  100

seq1  GACTTTTAAAATCTTCTTCCTACTGGAAGTAAGTAGAGATAAAGTTACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTAAAATCTTCTTCCTACTGGAAGTAAGTAGAGATAAAGTTACTT  150

seq1  GGCCTCCAAGGATGGAACACTCTTCGGTGACAAATGCAGATGGAATCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCCAAGGATGGAACACTCTTCGGTGACAAATGCAGATGGAATCAAG  200

seq1  AGGAGCACTGCAAAAGAAGGGCAGCATTCAGAGTGGAGGATGAGAGAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCACTGCAAAAGAAGGGCAGCATTCAGAGTGGAGGATGAGAGAGCC  250

seq1  ACGCTGAGCACAATTCTCTATATACTGGAGTTCAGATCTGTCCTATTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTGAGCACAATTCTCTATATACTGGAGTTCAGATCTGTCCTATTCAA  300

seq1  AGCACTCTCTGACTCAAATGGAGGGAACACTTGCAATATGGACAAATGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCTCTGACTCAAATGGAGGGAACACTTGCAATATGGACAAATGTC  350

seq1  ATAGTGTATATATTACTATAAATCGTCATTTCTGTATGATAAAGCCTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTATATATTACTATAAATCGTCATTTCTGTATGATAAAGCCTATC  400

seq1  AGGGTTTGTTTGTCCATGGTTTACCATGATGTTAGTATGTGGGATGAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTGTTTGTCCATGGTTTACCATGATGTTAGTATGTGGGATGAAGA  450

seq1  TAATTGATTACCTTCTATTAATTAATTCTATGAGTAAAAAGAAGTTACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGATTACCTTCTATTAATTAATTCTATGAGTAAAAAGAAGTTACAT  500

seq1  TTAGACTTCCCCAACACCACCCCAATAAGGTCATCTCTGGAGATAAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACTTCCCCAACACCACCCCAATAAGGTCATCTCTGGAGATAAATTT  550

seq1  TGTTTAGGTCACGAAGAAGAGTCTAAATCTGATCCAGTGTCTGGGATCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGGTCACGAAGAAGAGTCTAAATCTGATCCAGTGTCTGGGATCTG  600

seq1  TGTGACACATCACCGGATTTCCCAGTCTGTTTAGGTTCATGAATGTGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACACATCACCGGATTTCCCAGTCTGTTTAGGTTCATGAATGTGTGG  650

seq1  TAGCCATCCCTGATTGCCTTTATCTCTCTGTGTATCTGTGTCTTAGTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCATCCCTGATTGCCTTTATCTCTCTGTGTATCTGTGTCTTAGTCAC  700

seq1  TGTTCTATTGCAGTGAGGAGATACCATGACCACAGCAATGCTTCTAACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTATTGCAGTGAGGAGATACCATGACCACAGCAATGCTTCTAACAG  750

seq1  AGGGCTTGCTTACAATTTCATAGGTTAGTCCATTCCTGTGGTACAGAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTTGCTTACAATTTCATAGGTTAGTCCATTCCTGTGGTACAGAGCA  800

seq1  TGACAGCACATAGCAGACCTGATGCTGGAGAAGAAGCTAAAAGTTCTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCACATAGCAGACCTGATGCTGGAGAAGAAGCTAAAAGTTCTACA  850

seq1  TTCTGATCCACAGGCAGCAGAAAGAGAAAGAGACCTGGTCT-GAGTCT-G  898
      ||||||||||||||||||||||||||||||||||||||||| |||||| |
seq2  TTCTGATCCACAGGCAGCAGAAAGAGAAAGAGACCTGGTCTGGAGTCTGG  900

seq1  GCAT-GGGCTTTTGAAACCTCAAAGACCACCCCCAGTGACACACTTTCTC  947
      |||| |||||||||||||||||| ||||||||||||||||||||||||||
seq2  GCATGGGGCTTTTGAAACCTCAAGGACCACCCCCAGTGACACACTTTCTC  950

seq1  CAACAAGGCCATACCTACTAGTCCTTCTCAATTAAT-GGTACTCCCT-GG  995
      |||||||||||||||||||||||||||||||||||| |||||||||| ||
seq2  CAACAAGGCCATACCTACTAGTCCTTCTCAATTAATGGGTACTCCCTGGG  1000

seq1  TGACTAAGCATTTACATG  1013
      ||||||||||||||||||
seq2  TGACTAAGCATTTACATG  1018