BAC Information

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BAC

Clone NameB6Ng01-272J24
Chromosome6 (Build37)
Map Location 110,192,063 - 110,192,962
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043720
Downstream geneGrm7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272J24.bB6Ng01-272J24.g
ACCGA074404GA074405
length9111,161
definitionB6Ng01-272J24.b B6Ng01-272J24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacataccctacaagaaacaagccaggagaccacaagaccgaga
gacaaagaaattttatagccaaaatggttgaggttacataggactcaaag
gatctggggattagtaaaagtaagttcagaggctggggagattaaaggta
gatggcagggtatgccagccaggatggctctgtaataggaaccctacatc
tgagtggggactgaggaagattggtagctagaattaagtaataagccatt
tgtctcagttttttgagacctaatgtgtttttgtatatgtgcatgcatgt
atatagatatgctgtagttcttaataaaatacaacacatttaagtcagtg
acccacagaatgtagtgacctagagaaaataagagttatgcaacaatgaa
gaaacaaattcttattaccacttttatatgacatatcaaaaattttgttc
atgaatttgatgttaggtataaggtctacaatgcttcaggccacttagct
tcctaaacatgcatttctttagaaacatgctgtgatggtttgtatattct
tggaccagggagtggcaccatttggaggtgtggccttgtcagaataggtg
tgaactggtttgtcactgtggtatgtcactgtgggtgtgggatgaagatg
tttggatgaagatgtagaaactctcagctctgcctgtgccatgcctgcct
gatatactgccatactcccaccttgatgataatggactgaaacttctgaa
cctgtatgctagccccaatttaatgttgcttttataaaacttgcttttgg
tcatggtgtctgttcacagcagtaaaacccctaactatgacagaagttgg
gtaccaaggtgtggtatcaaaaatccttgtgttctagcagataacaagat
taagagagtgg

gaattctcacctatggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcgaaacaaaactgaggt
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacaga
agatgctggcaaggatgtcgagaaagaggaacactcctcaattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctta
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggatacatgctccactat
gtttatagcagccttatttatagtagccagaacctggaaagaacccagat
gcccctcaacaaaggaatggatacagaaaatgtgatacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaact
taggatacccaagatataagatacaatttgctaaacacatgaaattcaag
aggaatgaagaccaaagtggggacactgtgccccttcttagaattgggaa
caaaacacccatgggaggaattacagagacaaagtttggagcagtgacga
aaggatggaccatctagagactgccatatccagggatccaccccataatc
agcttccaaacgctgacaccattgcatacactagcaagattttgctgaaa
ggacccagatatagctgtctcatgtgagactatgcccgggccctagcaaa
cccagaagtggatgctcacagtcagctatcgatggattacagggctctca
atggaggagctaagcaagtacccagagctaaaggatctgcaccctatagt
gacacatatgactaccagtatccgagctctgactctagctgcatatgtat
caaaggatgctagtcgcatcactgtaaagagagtaagtgacctgcaacct
taaatgcccagtacagacgcaagctaaaaatggcaatgggtgtggcatat
ggataacgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_110192063_110192962
seq2: B6Ng01-272J24.b_45_955

seq1  GAATTCCACATACCCTACAAGAAACAAGCCAGGAGACCACAAGACCGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATACCCTACAAGAAACAAGCCAGGAGACCACAAGACCGAGA  50

seq1  GACAAAGAAATTTTATAGCCAAAATGGTTGAGGTTACATAGGACTCAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGAAATTTTATAGCCAAAATGGTTGAGGTTACATAGGACTCAAAG  100

seq1  GATCTGGGGATTAGTAAAAGTAAGTTCAGAGGCTGGGGAGATTAAAGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGGGGATTAGTAAAAGTAAGTTCAGAGGCTGGGGAGATTAAAGGTA  150

seq1  GATGGCAGGGTATGCCAGCCAGGATGGCTCTGTAATAGGAACCCTACATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCAGGGTATGCCAGCCAGGATGGCTCTGTAATAGGAACCCTACATC  200

seq1  TGAGTGGGGACTGAGGAAGATTGGTAGCTAGAATTAAGTAATAAGCCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGGGGACTGAGGAAGATTGGTAGCTAGAATTAAGTAATAAGCCATT  250

seq1  TGTCTCAGTTTTTTGAGACCTAATGTGTTTTTGTATATGTGCATGCATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAGTTTTTTGAGACCTAATGTGTTTTTGTATATGTGCATGCATGT  300

seq1  ATATAGATATGCTGTAGTTCTTAATAAAATACAACACATTTAAGTCAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGATATGCTGTAGTTCTTAATAAAATACAACACATTTAAGTCAGTG  350

seq1  ACCCACAGAATGTAGTGACCTAGAGAAAATAAGAGTTATGCAACAATGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACAGAATGTAGTGACCTAGAGAAAATAAGAGTTATGCAACAATGAA  400

seq1  GAAACAAATTCTTATTACCACTTTTATATGACATATCAAAAATTTTGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAATTCTTATTACCACTTTTATATGACATATCAAAAATTTTGTTC  450

seq1  ATGAATTTGATGTTAGGTATAAGGTCTACAATGCTTCAGGCCACTTAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTTGATGTTAGGTATAAGGTCTACAATGCTTCAGGCCACTTAGCT  500

seq1  TCCTAAACATGCATTTCTTTAGAAACATGCTGTGATGGTTTGTATATTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAACATGCATTTCTTTAGAAACATGCTGTGATGGTTTGTATATTCT  550

seq1  TGGACCAGGGAGTGGCACCATTTGGAGGTGTGGCCTTGTCAGAATAGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCAGGGAGTGGCACCATTTGGAGGTGTGGCCTTGTCAGAATAGGTG  600

seq1  TGAACTGGTTTGTCACTGTGGTATGTCACTGTGGGTGTGGGATGAAGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGGTTTGTCACTGTGGTATGTCACTGTGGGTGTGGGATGAAGATG  650

seq1  TTTGGATGAAGATGTAG-AACTCTCAGCTCTGCCTGTGCCATGCCTGCCT  699
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTTGGATGAAGATGTAGAAACTCTCAGCTCTGCCTGTGCCATGCCTGCCT  700

seq1  GA-ATACTGCCATACTCCCACCTTGATGATAATGGACTG-AACTTCTGAA  747
      || |||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GATATACTGCCATACTCCCACCTTGATGATAATGGACTGAAACTTCTGAA  750

seq1  CCTGTATGCTAGCCCCAATTAAATGTTGCTTTTATAAAACTTGC-TTTGG  796
      |||||||||||||||||||| ||||||||||||||||||||||| |||||
seq2  CCTGTATGCTAGCCCCAATTTAATGTTGCTTTTATAAAACTTGCTTTTGG  800

seq1  TCATGGTGTCTGTTCACAGCAGTAAAA-CCCTAACTATGACAGAAGTT-G  844
      ||||||||||||||||||||||||||| |||||||||||||||||||| |
seq2  TCATGGTGTCTGTTCACAGCAGTAAAACCCCTAACTATGACAGAAGTTGG  850

seq1  GTACC-AGGTG-GGTATC-AAAATCC-TGTGTTCTAGGAGATAGC-AGAT  889
      ||||| ||||| |||||| ||||||| |||||||||| ||||| | ||||
seq2  GTACCAAGGTGTGGTATCAAAAATCCTTGTGTTCTAGCAGATAACAAGAT  900

seq1  TAAGAGAGTGG  900
      |||||||||||
seq2  TAAGAGAGTGG  911


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