BAC Information

Click to search

BAC

Clone NameB6Ng01-273D04
Chromosome6 (Build37)
Map Location 46,412,757 - 46,413,257
singlet/doubletsinglet
Overlap geneCntnap2
Upstream genenone
Downstream geneRbpsuh-rs3, LOC622745, LOC100041064, LOC100041078, A930035D04Rik, Cul1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273D04.bB6Ng01-273D04.g
ACCGA074831GA074832
length4951,160
definitionB6Ng01-273D04.b B6Ng01-273D04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aacaatgcttgtcctgtagctctggtcagatgatggtttctcttgttata
gccctggtatctcctgctccatcgttctgcatcctatgcttcctatggga
aatgaactttcaaattgtgcattctcagagccaagagatcaaataccagg
ataattgtgggctcctcagtgattgtgtgagtgtgaaaagcaatgtgaaa
agcaatgcaagggacacttagaacctagaatggaaaagcaggggattcta
tgcacatcaacagtatttaacatagccaatgcaccgttaatagcccttca
agcccctgtgtgtctagtatgtttttctaagtactttttttagtacttag
tatgtttactaagtggtgcctgcaggggaccactgtatataaacttttct
ctttggtaccctgtttaaatgcctctgagactctctctctctctctctct
ctctctctgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtg

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgcccgggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaggagctaaagggatctgccacctat
agtggaaccacattatgagctaaccagtacccggagctctgactctagct
gcatatatatcaaagatgctagtcggcatcacttgaaaggaagtccatga
cttgccaactaatgcctagtacaggcatacagtctaaaagggaattggct
gggtcagtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_46412757_46413257
seq2: B6Ng01-273D04.b_45_545

seq1  GAATTCAACAATGCTTGTCCTGTAGCTCTGGTCAGATGATGGTTTCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAATGCTTGTCCTGTAGCTCTGGTCAGATGATGGTTTCTCTT  50

seq1  GTTATAGCCCTGGTATCTCCTGCTCCATCGTTCTGCATCCTATGCTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAGCCCTGGTATCTCCTGCTCCATCGTTCTGCATCCTATGCTTCCT  100

seq1  ATGGGAAATGAACTTTCAAATTGTGCATTCTCAGAGCCAAGAGATCAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAATGAACTTTCAAATTGTGCATTCTCAGAGCCAAGAGATCAAAT  150

seq1  ACCAGGATAATTGTGGGCTCCTCAGTGATTGTGTGAGTGTGAAAAGCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGATAATTGTGGGCTCCTCAGTGATTGTGTGAGTGTGAAAAGCAAT  200

seq1  GTGAAAAGCAATGCAAGGGACACTTAGAACCTAGAATGGAAAAGCAGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAAGCAATGCAAGGGACACTTAGAACCTAGAATGGAAAAGCAGGGG  250

seq1  ATTCTATGCACATCAACAGTATTTAACATAGCCAATGCACCGTTAATAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATGCACATCAACAGTATTTAACATAGCCAATGCACCGTTAATAGC  300

seq1  CCTTCAAGCCCCTGTGTGTCTAGTATGTTTTTCTAAGTACTTTTTTTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAAGCCCCTGTGTGTCTAGTATGTTTTTCTAAGTACTTTTTTTAGT  350

seq1  ACTTAGTATGTTTACTAAGTGGTGCCTGCAGGGGACCACTGTATATAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTATGTTTACTAAGTGGTGCCTGCAGGGGACCACTGTATATAAAC  400

seq1  TTTTCTCTTTGGTACCCTGTTTAAATGCCTCTGAGACTCTCTCTCTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTTTGGTACCCTGTTTAAATGCCTCTGAGACTCTCTCTCTCTCT  450

seq1  CTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGT  500

seq1  G  501
      |
seq2  G  501


| Home | SequenceCutter | Blast | Download |