BAC Information

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BAC

Clone NameB6Ng01-274E14
Chromosome6 (Build37)
Map Location 35,135,394 - 35,223,721
singlet/doubletdoublet
Overlap geneNup205, 1810058I24Rik, Slc13a4
Upstream geneAkr1b3, Akr1b8, LOC664942, 2310005E10Rik, Akr1b7, Bpgm, LOC100039184, Cald1, Agbl3, Tmem140, 3110062M04Rik, 9530020G05Rik, Stra8, 2010107G12Rik, Cnot4
Downstream geneBC064033, 1700065J11Rik, Mtpn, LOC100039312, LOC100039327, 9330158H04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274E14.bB6Ng01-274E14.g
ACCGA075627GA075628
length1,1331,148
definitionB6Ng01-274E14.b B6Ng01-274E14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,222,574 - 35,223,721)(35,135,394 - 35,136,533)
sequence
gaattctaggtaataattattaaagtattaaataggcgctgttgaatttt
tttttcccagctaaaaactcccaggctcctttagccatcctcagaggtca
cacttcctggcctcactacagctttcttcggctgtatttaaatatggtcc
aggggtggtcagtccatgagttatgttaggtcaccctcctctgtctctga
tgacagcatccagctgcagttgcataggagattttatgaggtttccttgg
cacgcatgtcagaactaacttgagagtcacttgtgactaactaagagtca
cttgtgactcattctttgcatcagtggccactattaaacctctgtgtctt
cagcatcccctgtatctgtattgtcaacctctctaactctatgttcagag
tttaatattgattcatattgaatcccacttataagtttggcctgagccta
cttttttcttttttcttttttttttttttttggacactacagttcagttc
tgtctctatgaaacctttgactcaactagtttttggcttttttttaaaga
tttgtttgtttgtttgtttgtttgtttgtttgttttgtatgtgagtacac
tgtagctgtcttcagacacaccagaagagggtattagatcccattacaga
tagttgtgagccatcatgtggttgctgggaattgaactcaggacctctgg
aagagccgccagtgctcttagctgctgagccagctctccagcccccgact
tggctagttttaatactagagcaagtcagtgaaatctgtgtcatttctac
tgagtcagaagctacctcagagttttgacactggtaaggaaaatcccacc
acaccaaaataatcttaataagtaaagtaaagtcttcatttgataattta
tcaatttattttaaattttagtatcaaagatttctgttgggaaaagtaat
tatcattagattattttactctagcgataagtaccggttggaataacaat
cataaataagtctccaattgttactaaaatgcaccgtttctaactcatcg
tggcctctgactgctttgtgtcagtctcgtggttatcacagtttatagag
aacgtgagactgctgagcagcaaagcattcaat
gaattcttcaggatctgaactttaacagtttgttattgtactggctggtt
ttgtgttaactttgacacaggctggagttatcacagagaaaggagcttca
gttggggaaatgcctccatgagatccagctgtggggcattttctcaatta
gtgatcaaaggggaggggcccattgtgggtggtgccatccctgagctggt
agttttgggttctataagagagcaggctgagcaagctggggaagcaagcc
tgtgagtaacatcactccgtggcttccgcatcagctcctgcttcctaacc
tgcttgagttccagtcctgacttccttggtgatgaacagcattatggaag
tgtaagctgaataaaccctttcctccccaacttgcttcttggtcatgatg
tttgtgcaggaataaaaaccctgactaagacagttatctacgagagactt
ctctgtgttaaatagttgaatcaaggaggttttaaggggcctaatgaggt
ggcttagtactagaacacttgcctagtgtgtgtccatttgtgggttacat
ccctaccaccacacatataaaaagagttttgtaggatataaaatcatgtt
actaatttatgattcactctacaaagtaatactattgcttgttacttaat
atagttcatatgtccatttgaattattgtatgtaactagaacattcactt
agatatgtggaaatcagaatagtatttgtatttttcctggtttttatgga
gcttagcagatagttttgagaaggtagtactgggaaagatgaaggtggtg
ccacgtgttgcctcatatcccctagttctggataactagataagaaacac
ttcagtttgtcatgctaccaggcttcattgtttttgttcgcatgcatgct
ggccatgactctacttggcctgggcttccaaatataggattaaaggcatg
tgcttgccttgggcaacgaggctgcgttgtcatgaaactgaccttctgct
aggagcactattttcatttacttaattaataatttttatcattctagccc
aaaatgttcaacagcattgagaaaaatcagaaagccaggttccagaggtg
tgcgatccaagggtcaacaaggaccgaacttcttctgagcaggctcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_35222574_35223721
seq2: B6Ng01-274E14.b_43_1175 (reverse)

seq1  ATTGAATAGCTCTTTGCTGGCTTCAGCAGTCCTCACTGTTCCTTCCTATA  50
      |||||||    ||||||||   |||||||| ||||| ||||    |||||
seq2  ATTGAAT---GCTTTGCTG--CTCAGCAGT-CTCAC-GTTC---TCTATA  40

seq1  ACCTGTGATTACACCACGAGACTGACACAAAGGCAGGTCAGGAAGGGCCA  100
      | |||||||   ||||||||||||||||||| ||| |||||    |||||
seq2  AACTGTGAT--AACCACGAGACTGACACAAA-GCA-GTCAG---AGGCCA  83

seq1  CCGGATGAGTTAGAAACGGTGCATTTTAGGAAACAATGGAGACTTATTTA  150
      |  |||||||||||||||||||||||||| ||  | ||||||||||||||
seq2  C--GATGAGTTAGAAACGGTGCATTTTAGTAACAATTGGAGACTTATTTA  131

seq1  TGA-TGTTA-TCCAACCGGTACTTATCGCTAGAGTAAAATAATCTAATGA  198
      ||| ||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGTTATTCCAACCGGTACTTATCGCTAGAGTAAAATAATCTAATGA  181

seq1  TAATTACTTTT-CCAACAGAAATCTTTGATACTAAAATTTAAAATAAATT  247
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAATTACTTTTCCCAACAGAAATCTTTGATACTAAAATTTAAAATAAATT  231

seq1  GATAAATTATCAAATGAAGACTTTACTTTACTTATTAAGAT--ATTTGGT  295
      |||||||||||||||||||||||||||||||||||||||||   ||||||
seq2  GATAAATTATCAAATGAAGACTTTACTTTACTTATTAAGATTATTTTGGT  281

seq1  GTGGTGGGATTTTCCTTACCAGTGTCAAAACTCTGAGGTAGCTTCTGACT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGGATTTTCCTTACCAGTGTCAAAACTCTGAGGTAGCTTCTGACT  331

seq1  CAGTAGAAATGACACAGATTTCACCTGACTTGCTCTAGTATTAAAACTAG  395
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CAGTAGAAATGACACAGATTTCA-CTGACTTGCTCTAGTATTAAAACTAG  380

seq1  CCAAGTCGGGGGCTGGAGAGCTGGCTCAGCAGCTAAGAGCACTGGCGGCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTCGGGGGCTGGAGAGCTGGCTCAGCAGCTAAGAGCACTGGCGGCT  430

seq1  CTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGATGGCTCACAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGATGGCTCACAA  480

seq1  CTATCTGTAATGGGATCTAATACCCTCTTCTGGTGTGTCTGAAGACAGCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGTAATGGGATCTAATACCCTCTTCTGGTGTGTCTGAAGACAGCT  530

seq1  ACAGTGTACTCACATACAAAACAAACAAACAAACAAACAAACAAACAAAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTACTCACATACAAAACAAACAAACAAACAAACAAACAAACAAAC  580

seq1  AAATCTTTAAAAAAAAGCCAAAAACTAGTTGAGTCAAAGGTTTCATAGAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTAAAAAAAAGCCAAAAACTAGTTGAGTCAAAGGTTTCATAGAG  630

seq1  ACAGAACTGAACTGTAGTGTCCAAAAAAAAAAAAAAAAGAAAAAAGAAAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACTGAACTGTAGTGTCCAAAAAAAAAAAAAAAAGAAAAAAGAAAA  680

seq1  AAGTAGGCTCAGGCCAAACTTATAAGTGGGATTCAATATGAATCAATATT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGGCTCAGGCCAAACTTATAAGTGGGATTCAATATGAATCAATATT  730

seq1  AAACTCTGAACATAGAGTTAGAGAGGTTGACAATACAGATACAGGGGATG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTGAACATAGAGTTAGAGAGGTTGACAATACAGATACAGGGGATG  780

seq1  CTGAAGACACAGAGGTTTAATAGTGGCCACTGATGCAAAGAATGAGTCAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGACACAGAGGTTTAATAGTGGCCACTGATGCAAAGAATGAGTCAC  830

seq1  AAGTGACTCTTAGTTAGTCACAAGTGACTCTCAAGTTAGTTCTGACATGC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACTCTTAGTTAGTCACAAGTGACTCTCAAGTTAGTTCTGACATGC  880

seq1  GTGCCAAGGAAACCTCATAAAATCTCCTATGCAACTGCAGCTGGATGCTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAAGGAAACCTCATAAAATCTCCTATGCAACTGCAGCTGGATGCTG  930

seq1  TCATCAGAGACAGAGGAGGGTGACCTAACATAACTCATGGACTGACCACC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGAGACAGAGGAGGGTGACCTAACATAACTCATGGACTGACCACC  980

seq1  CCTGGACCATATTTAAATACAGCCGAAGAAAGCTGTAGTGAGGCCAGGAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACCATATTTAAATACAGCCGAAGAAAGCTGTAGTGAGGCCAGGAA  1030

seq1  GTGTGACCTCTGAGGATGGCTAAAGGAGCCTGGGAGTTTTTAGCTGGGAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACCTCTGAGGATGGCTAAAGGAGCCTGGGAGTTTTTAGCTGGGAA  1080

seq1  AAAAAAATTCAACAGCGCCTATTTAATACTTTAATAATTATTACCTAGAA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATTCAACAGCGCCTATTTAATACTTTAATAATTATTACCTAGAA  1130

seq1  TTC  1148
      |||
seq2  TTC  1133

seq1: chr6_35135394_35136533
seq2: B6Ng01-274E14.g_68_1215

seq1  GAATTCTTCAGGATCTGAACTTTAACAGTTTGTTATTGTACTGGCTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGGATCTGAACTTTAACAGTTTGTTATTGTACTGGCTGGTT  50

seq1  TTGTGTTAACTTTGACACAGGCTGGAGTTATCACAGAGAAAGGAGCTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTAACTTTGACACAGGCTGGAGTTATCACAGAGAAAGGAGCTTCA  100

seq1  GTTGGGGAAATGCCTCCATGAGATCCAGCTGTGGGGCATTTTCTCAATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGGAAATGCCTCCATGAGATCCAGCTGTGGGGCATTTTCTCAATTA  150

seq1  GTGATCAAAGGGGAGGGGCCCATTGTGGGTGGTGCCATCCCTGAGCTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCAAAGGGGAGGGGCCCATTGTGGGTGGTGCCATCCCTGAGCTGGT  200

seq1  AGTTTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCTGGGGAAGCAAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCTGGGGAAGCAAGCC  250

seq1  TGTGAGTAACATCACTCCGTGGCTTCCGCATCAGCTCCTGCTTCCTAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTAACATCACTCCGTGGCTTCCGCATCAGCTCCTGCTTCCTAACC  300

seq1  TGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAACAGCATTATGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAACAGCATTATGGAAG  350

seq1  TGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCTTCTTGGTCATGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCTTCTTGGTCATGATG  400

seq1  TTTGTGCAGGAATAAAAACCCTGACTAAGACAGTTATCTACGAGAGACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCAGGAATAAAAACCCTGACTAAGACAGTTATCTACGAGAGACTT  450

seq1  CTCTGTGTTAAATAGTTGAATCAAGGAGGTTTTAAGGGGCCTAATGAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGTTAAATAGTTGAATCAAGGAGGTTTTAAGGGGCCTAATGAGGT  500

seq1  GGCTTAGTACTAGAACACTTGCCTAGTGTGTGTCCATTTGTGGGTTACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAGTACTAGAACACTTGCCTAGTGTGTGTCCATTTGTGGGTTACAT  550

seq1  CCCTACCACCACACATATAAAAAGAGTTTTGTAGGATATAAAATCATGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACCACCACACATATAAAAAGAGTTTTGTAGGATATAAAATCATGTT  600

seq1  ACTAATTTATGATTCACTCTACAAAGTAATACTATTGCTTGTTACTTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTTATGATTCACTCTACAAAGTAATACTATTGCTTGTTACTTAAT  650

seq1  ATAGTTCATATGTCCATTTGAATTATTGTATGTAACTAGAACATTCACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCATATGTCCATTTGAATTATTGTATGTAACTAGAACATTCACTT  700

seq1  AGATATGTGGAAATCAGAATAGTATTTGTATTTTTCCTGGTTTTTATGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGTGGAAATCAGAATAGTATTTGTATTTTTCCTGGTTTTTATGGA  750

seq1  GCTTAGCAGATAGTTTTGAGAAGGTAGTACTGGGAAAGATGAAGGTGGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGCAGATAGTTTTGAGAAGGTAGTACTGGGAAAGATGAAGGTGGTG  800

seq1  CCACGTGTTGCCTCATATCCCCTAGTTCTGGATAACTAGATAAGAAACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGTGTTGCCTCATATCCCCTAGTTCTGGATAACTAGATAAGAAACAC  850

seq1  TTCAGTTTGTCATGCTACCAGGCTTCATTGTTTTTGTTCGCATGCATGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTTGTCATGCTACCAGGCTTCATTGTTTTTGTTCGCATGCATGCT  900

seq1  GGCCATGACTCTACTT-GCCT-GGCCTCCAAATATAGGATTAAAGGCATG  948
      |||||||||||||||| |||| ||| ||||||||||||||||||||||||
seq2  GGCCATGACTCTACTTGGCCTGGGCTTCCAAATATAGGATTAAAGGCATG  950

seq1  TGC-TGCCTTGGCAAACGAGGCTGCGTTGTCATG-AACTGA-CTTCTGCT  995
      ||| ||||||||  |||||||||||||||||||| |||||| ||||||||
seq2  TGCTTGCCTTGGGCAACGAGGCTGCGTTGTCATGAAACTGACCTTCTGCT  1000

seq1  AGGAGCACTATTTTCA-TTACTTAATT-ATAA-TTTTATCATTCTAGCCC  1042
      |||||||||||||||| |||||||||| |||| |||||||||||||||||
seq2  AGGAGCACTATTTTCATTTACTTAATTAATAATTTTTATCATTCTAGCCC  1050

seq1  AAAAATGTTCAACAGCA-TGAGAAAATTCAGAAAGCCAG--TTCAGAGGG  1089
       |||||||||||||||| |||||||| ||||||||||||  | |||| ||
seq2  -AAAATGTTCAACAGCATTGAGAAAAATCAGAAAGCCAGGTTCCAGA-GG  1098

seq1  TGTTGCGATCC-AGGGGCAACAAGGAACCAGACTTCTTCCTGAGCA-GCT  1137
      || |||||||| |||| |||||||| |||  ||||||| ||||||| |||
seq2  TG-TGCGATCCAAGGGTCAACAAGG-ACCGAACTTCTT-CTGAGCAGGCT  1145

seq1  CAT  1140
      |||
seq2  CAT  1148