BAC Information

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BAC

Clone NameB6Ng01-274K13
Chromosome8 (Build37)6 (Build37)
Map Location 79,825,831 - 79,826,43832,512,070 - 32,513,252
singlet/doubletsingletsinglet
Overlap geneArhgap10
Upstream geneLOC666226, LOC100039211, LOC384847, Nr3c2
Downstream geneLOC100039235, AI931714, Tmem34, Ednra, EG622803, Ttc29
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274K13.bB6Ng01-274K13.g
ACCGA075904GA075905
length1,1331,181
definitionB6Ng01-274K13.b B6Ng01-274K13.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(79,825,831 - 79,826,438)(32,512,070 - 32,513,252)
sequence
gaattcagaactcttcagctggggaatggtggtaatgaagtgttcccaca
acacagactgttgagaaggattcaactgcgtgaattcagaactcttctgc
tggggaacagggtacccgtaagtatagctttacaaggtaagtctggcctt
gaactttctaacgaaattcaagacggtctatcagaagtaaagtgggaaat
agctttacaaggtaagtctggtcttgaactttctaacgaaattcaagaca
gtctatcagaagtaaagtgggaaatagctttacaaggtatgtttggcctt
gaactttctctagtgttagaagcccttttgttccttttcacatgttatca
agtggttaaggcagggcggattctggacgaaattcgagacaatctatcag
aagtaaagcggggagagagagtaggagcaaagaggaaatatggtacacaa
aataagtatacaggcctttccacgggtcttgaacccgaggaaaagtttag
gtcaggtaagaatacctggggagagattagaaggaaggaaaagaaaaaag
aaaagaaaaaagatcaattagcggaggtctctaggagaaggaacctatac
tcatcactagatgagctcaaggagccagttcttagtagttctgaatcaga
tgaaaaggctattagggcctggaaagcgctctcccgagcaggtgaagcca
ctggacaactaacaagatcgtccagggacctcaggagtccttctcagatt
ttgtggccagagagacagaggcaggctcttgcagcctacaaggtcttatt
gtccaccctggagttgtagatcaggattataaaggggaacttcaggttct
ctgttcttgtcctcaagttgtcttttctatatcacaaaagggacagaata
gctcaactaataattttgccaagcctacatgggctgttttcccttccctc
tggtattccttgagctgccagagggattggttctactgaagtgattctta
tacttaataatgcctttagattgtgtcaaattttatctactcatcagccc
attacagtcctgacaaatggaatgtcacgcattatttcctccttgggagg
aaatcaatgttttacattgtgttcattgacacc

gaattcacctgccctgataacaccaagcagcccaagaacaaacagatcag
acctgtctagatcaacccagctagatcagacctgtctatagaagactgtc
taaccagatctgccccattttgtccttctcctggtttccctaactgagtc
atggagactaagatcacagaaggaaagtgaaatatgactctaggtgtcac
ctttcaaagggtgttactgattgtcagctaaagtgatttaagccctggaa
aaaccctcccgtgtccttttaacatccaaaacgaatcctcttcacaccaa
ccatcaatgttaaataaacagaagtcccccattaacctgcacctctgtgc
gtttactttgtaaaagcacacagtgtcactctcctttaaacgaacatact
aattagtgtattaataaatagctgaatggaatcaatgagacatgtaatca
aggtctgatcgggagatggggccaggctgaagaggctgaagggaagagat
gaaggaaaagaatcttattaacaggtttgctgagaggggacacgtaaaat
caatgtccggaatgcaatgaagacacagccaaaagttgacagtttggtgg
gaagctaagtgcttgccctgcctcctcccttcaacagagaagttactggt
gagagttaatgggaccagcagggagaacagaagttaattggtgttgggaa
agccattcagagatggtgtccaagatcgcagctggaagaattacccagga
cttcagtacaaaggcctaactcctagacctgtattcaaaatactaagacc
aagcttgagaaccgaatgaattctcaatgaacattcgctctccaaaagat
tctgtagtagagtcatttgtttgggggtttagtcttagtcaccccaaaag
tctgtgctttttacccccaaggtgcctgggttggagggcctgaccaaagc
agccttagaaggctctaaggacccctattcctcttcctcagctccacatt
ttcttgtgaacacaccctctgagcagagcagaagcctctagaaatgtgag
agaagcctttgcaggtctgagatgactggctctgattacccactcgccct
tctctaatgagtcaaggtgagcttctgaacggatactcagcttgggccca
ctccttatcagcttgcaacggccctagtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_79825831_79826438
seq2: B6Ng01-274K13.b_568_1177

seq1  AGATTAGAAGTAAGGAAAAGAAAAAAGAAAAGAAAAAAGATCAATTAGCG  50
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGAAGGAAGGAAAAGAAAAAAGAAAAGAAAAAAGATCAATTAGCG  50

seq1  GAGGTCTCTAGGAGAAGGAACCTATACTCATCACTAGATGAGCTCAAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTCTAGGAGAAGGAACCTATACTCATCACTAGATGAGCTCAAGGA  100

seq1  GCCAGTTCTTAGTAGTTCTGAATCAGATGAAAAGGCTATTAGGGCCTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTTCTTAGTAGTTCTGAATCAGATGAAAAGGCTATTAGGGCCTGGA  150

seq1  AGGCGCTCTCCCGAGCAGGTGAAGCCACTGGACAACGAACAAAGATCGAC  200
      | |||||||||||||||||||||||||||||||||| ||| ||||||| |
seq2  AAGCGCTCTCCCGAGCAGGTGAAGCCACTGGACAACTAAC-AAGATCGTC  199

seq1  CAGGGACCTCAGGAGTCCTTCTCAGATTTTGTGGCCAGAGAGACAGAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACCTCAGGAGTCCTTCTCAGATTTTGTGGCCAGAGAGACAGAGGC  249

seq1  AGGCTCTTGCAGCCTACAAGGTCTTATTGTCCACCCTGGAGTTGTAGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTTGCAGCCTACAAGGTCTTATTGTCCACCCTGGAGTTGTAGATC  299

seq1  AGGATTATAAAGGGGAACTTCAGGTTCTCTGTTCTTGTCCTCAAGTTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTATAAAGGGGAACTTCAGGTTCTCTGTTCTTGTCCTCAAGTTGTC  349

seq1  TTTTCTATATCAC-AAAGGGACAGAATAGCTCAACTAATAATTTTGCCAA  399
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTTCTATATCACAAAAGGGACAGAATAGCTCAACTAATAATTTTGCCAA  399

seq1  GCCTACAT-GGCTGTTTTCC--TTCCTCTGGTATTCCTTGAGCTGCCAGA  446
      |||||||| |||||||||||  | ||||||||||||||||||||||||||
seq2  GCCTACATGGGCTGTTTTCCCTTCCCTCTGGTATTCCTTGAGCTGCCAGA  449

seq1  GGGATTGGTTCTACTGAAAGTGATTCTGATTACTTAATAATGCCTTTAGA  496
      |||||||||||||||| |||||||||| | ||||||||||||||||||||
seq2  GGGATTGGTTCTACTG-AAGTGATTCTTA-TACTTAATAATGCCTTTAGA  497

seq1  TTGTTGTCAAATTTTATCTACTCATGCCAGGCCATTACAGGTCTGGCAAA  546
      ||| |||||||||||||||||||||  ||| |||||||||  ||| ||||
seq2  TTG-TGTCAAATTTTATCTACTCAT--CAGCCCATTACAGTCCTGACAAA  544

seq1  TGG-ATGTCACGCA-TATTTCCTCCTTTGGGAGAAATCAAT-ATTTACA-  592
      ||| |||||||||| |||||||||||| ||  |||||||||  |||||| 
seq2  TGGAATGTCACGCATTATTTCCTCCTTGGGAGGAAATCAATGTTTTACAT  594

seq1  TGTTTCTATTGACACC  608
      ||| |  |||||||||
seq2  TGTGTTCATTGACACC  610


seq1: chr6_32512070_32513252
seq2: B6Ng01-274K13.g_67_1247

seq1  GAATTCACCTGCCCTGATAACACCAAGCAGCCCAAGAACAAACAGATCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTGCCCTGATAACACCAAGCAGCCCAAGAACAAACAGATCAG  50

seq1  ACCTGTCTAGATCAACCCAGCTAGATCAGACCTGTCTATAGAAGACTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTCTAGATCAACCCAGCTAGATCAGACCTGTCTATAGAAGACTGTC  100

seq1  TAACCAGATCTGCCCCATTTTGTCCTTCTCCTGGTTTCCCTAACTGAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAGATCTGCCCCATTTTGTCCTTCTCCTGGTTTCCCTAACTGAGTC  150

seq1  ATGGAGACTAAGATCACAGAAGGAAAGTGAAATATGACTCTAGGTGTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGACTAAGATCACAGAAGGAAAGTGAAATATGACTCTAGGTGTCAC  200

seq1  CTTTCAAAGGGTGTTACTGATTGTCAGCTAAAGTGATTTAAGCCCTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAAAGGGTGTTACTGATTGTCAGCTAAAGTGATTTAAGCCCTGGAA  250

seq1  AAACCCTCCCGTGTCCTTTTAACATCCAAAACGAATCCTCTTCACACCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTCCCGTGTCCTTTTAACATCCAAAACGAATCCTCTTCACACCAA  300

seq1  CCATCAATGTTAAATAAACAGAAGTCCCCCATTAACCTGCACCTCTGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAATGTTAAATAAACAGAAGTCCCCCATTAACCTGCACCTCTGTGC  350

seq1  GTTTACTTTGTAAAAGCACACAGTGTCACTCTCCTTTAAACGAACATACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTTTGTAAAAGCACACAGTGTCACTCTCCTTTAAACGAACATACT  400

seq1  AATTAGTGTATTAATAAATAGCTGAATGGAATCAATGAGACATGTAATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTGTATTAATAAATAGCTGAATGGAATCAATGAGACATGTAATCA  450

seq1  AGGTCTGATCGGGAGATGGGGCCAGGCTGAAGAGGCTGAAGGGAAGAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTGATCGGGAGATGGGGCCAGGCTGAAGAGGCTGAAGGGAAGAGAT  500

seq1  GAAGGAAAAGAATCTTATTAACAGGTTTGCTGAGAGGGGACACGTAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAAAGAATCTTATTAACAGGTTTGCTGAGAGGGGACACGTAAAAT  550

seq1  CAATGTCCGGAATGCAATGAAGACACAGCCAAAAGTTGACAGTTTGGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCCGGAATGCAATGAAGACACAGCCAAAAGTTGACAGTTTGGTGG  600

seq1  GAAGCTAAGTGCTTGCCCTGCCTCCTCCCTTCAACAGAGAAGTTACTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTAAGTGCTTGCCCTGCCTCCTCCCTTCAACAGAGAAGTTACTGGT  650

seq1  GAGAGTTAATGGGACCAGCAGGGAGAACAGAAGTTAATTGGTGTTGGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTAATGGGACCAGCAGGGAGAACAGAAGTTAATTGGTGTTGGGAA  700

seq1  AGCCATTCAGAGATGGTGTCCAAGATCGCAGCTGGAAGAATTACCCAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTCAGAGATGGTGTCCAAGATCGCAGCTGGAAGAATTACCCAGGA  750

seq1  CTTCAGTACAAAGGCCTAACTCCTAGACCTGTATTCAAAATACTAAGACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTACAAAGGCCTAACTCCTAGACCTGTATTCAAAATACTAAGACC  800

seq1  AAGCTTGAGAACCGAATGAATTCTCAATGAACATTCGCTCTCCAAAAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGAGAACCGAATGAATTCTCAATGAACATTCGCTCTCCAAAAGAT  850

seq1  TCTGTAGTAGAGTCATTTGTTTGGGGGTTTAGTCTTAGTCACCCCAAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGTAGAGTCATTTGTTTGGGGGTTTAGTCTTAGTCACCCCAAAAG  900

seq1  TCTGTGCTTTTTACCCCCAAGGTGCCT-GGTTGGAGGGCCTGACCAAAGC  949
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCTGTGCTTTTTACCCCCAAGGTGCCTGGGTTGGAGGGCCTGACCAAAGC  950

seq1  AGCCTTAG-AGGCTCTAA-GACCCCTATTCCTCTTCCTCAGCTCCACA-T  996
      |||||||| ||||||||| ||||||||||||||||||||||||||||| |
seq2  AGCCTTAGAAGGCTCTAAGGACCCCTATTCCTCTTCCTCAGCTCCACATT  1000

seq1  TTCTTGTG-ACACA-CCTCTGAGCAGAGCAGGAAGGCTCTAGAAATTGTT  1044
      |||||||| ||||| ||||||||||||||| |||| ||||||||||   |
seq2  TTCTTGTGAACACACCCTCTGAGCAGAGCA-GAAGCCTCTAGAAAT--GT  1047

seq1  GAGAGGAAAGGCTTTGCAAGTCTGAGATGAACTGGGCTCTGATTACCCAC  1094
      |||||  ||| ||||||| |||||||||| ||| ||||||||||||||||
seq2  GAGAG--AAGCCTTTGCAGGTCTGAGATG-ACT-GGCTCTGATTACCCAC  1093

seq1  TCGCC--TCTCTATTGGAGTTCAGGTGAGC-TCTGAAACGTGATTTACTC  1141
      |||||  |||||| | ||||  |||||||| |||| |||| ||  |||| 
seq2  TCGCCCTTCTCTAAT-GAGTCAAGGTGAGCTTCTG-AACG-GA--TACT-  1137

seq1  CAGCTGGGGGCCCACTCC-TATCAGCTGCAAACG--CCTAGTTTT  1183
      |||||  ||||||||||| ||||||||   ||||  |||||||||
seq2  CAGCT-TGGGCCCACTCCTTATCAGCTTGCAACGGCCCTAGTTTT  1181


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