BAC Information

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BAC

Clone NameB6Ng01-274K16
Chromosome6 (Build37)
Map Location 141,716,268 - 141,717,441
singlet/doubletsinglet
Overlap geneEG435927
Upstream geneLOC664875, Pde3a, Slco1c1, Slco1b2
Downstream geneSlco1a4, LOC100042750, EG664913, Slco1a1, EG625716, Slco1a6, Slco1a5, Iapp, BC027061, Recql, Golt1b, B230216G23Rik, Gys2, Ldhb, Kcnj8, Abcc9, 5330439B14Rik, Cmas
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274K16.bB6Ng01-274K16.g
ACCGA075910GA075911
length1,2041,179
definitionB6Ng01-274K16.b B6Ng01-274K16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgttacttgccttgtaaatgtccttccatttgaaatttgtact
tttcatccgccttcattaaatttacataaaaatcatttaatcttcagaga
tgctaataagagtagtatgctgtttttgctttgttcatctcaactgtcac
tgttcagcgctgacatattagaaactaatgacttgtatataaactcttct
tatgactacttccttgttccagttatttccttagcaatcctttgagacgt
ttttaaggattactgtgcaaactgaatttcatcatcttcttcttttccta
ataatgtaaatattattccttttcttgttttattgcattagctcggatgt
ccagttaactgttggtaggcggtggtaagagagctctcctactttttttc
tactggtgaagctcctattgtgtcattattaatgggcataagtttttagt
gcacaatctttaaatacatttaaataatttagttcttataacactttatt
attacatgtatgcatatgtgtattcttttatagcttgctgatatgaaggg
tttcttagaatcatcttgcacagctgagataaatagtctttggtcataga
gtttaattattttctgtttgataattattgttgaaattttttgcttgtgt
ccatgagattatggtctgcccttcttttatcttataatgtctttgtcaag
tttggaaatgtgatggcctcataggataataggtgaggtattcctagagt
ttctatactcatgaagactagaggaaattagtacaatattttccttagct
attccagacagtttcattagagatatcttctgtactcatttctttctatt
tggtgaatttattaactagtaaatccccttttccacagatataggccttt
tcagattcctgctttgtctcatgttctgtgcagattgcgttctacaaaaa
ataggaccatgtcacctacatctttaaaattgtagcagtgttcatagttg
ttcatagtattccttttagtctttaaaggcccatgtaatgtagcaatggc
tctttttcaattaattgatccttactctttacttcatgtcacccagtaga
gtttttacaaattgatttcaaagaacctgctcttgatttgcgattctcta
tggaatacatgcctcattcaattgaatttcctttttcaccaccttgagaa
catc
gaattcatcacacacaagcattcaaatacatacataaacaatgaaagaaa
aaaagaataaaaaaagaatactccctttgaaagcaggaaaagactgctct
aaaggagattgcttcagattccagagtgctgacataaaaagtcagtagga
ttagatttttaaatacaggtatttaaatataggatacatgtataaatatg
tccactggcttcttttacttttgagaaacaacgatgggctctttacttat
atagctttcttcttgaaacataagattttttaaaaattttataaactttg
cttttaaaaggaggatctgaattacaaaactcatgtgaaaactgtctcag
tcacatcctctgactgacagtgggaagagaaaacatttccacaaatagca
tttggagttagagaaaaatatctatgtttcaactataaggaaatttgtgt
tcatatttcccaattcgtttttttgtttttgtttttgttttttttgtttt
tgtttttgttttttgttttttgtttttttttattttttattttttatttt
ttttgcagatgtatctgctcaggtttatccaaattgattggtgattttgt
caataaattcataagcaggaagtgctaatataacagagtctaatatgagt
gcatatccaccctttattctgcagctgaggaactccaaaatgttctgctc
tggatatctatgccatgcacaccacttggactgctgagattaagtgttaa
agaacatattgtgtgaggaagaaaaaaaattaaaacagaggccactttgc
tgtggccattgaaatctgtggagggactgtgcttgttgtgcccaagaatt
cagtaaaggaggacaaagtgctcaaatagcacagacaaccagagacgttt
cattcctgcatagagaacatagtatgcttactgcagacacatgctttgga
gtagctctgtgttctcttccttcccttccttgacagacacacttgtcctt
caggtaacagtatagtgctgaagacaatcactagctgtgtctacatagaa
caacttccattgtcttttatgtatggaatatgtacaactgattaaaaaga
gccaaagacataattaatcaacaacacgaactgcctaaccaagcctagct
acctgcatgtgcaaaagtgaggaagcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_141716268_141717441
seq2: B6Ng01-274K16.g_65_1243 (reverse)

seq1  TATGCTTCCCTCAC-TCTGCACATGCAGGTAGACTAG--CTGGTTA-GCA  46
      ||||||| |||||| | ||||||||||||||| ||||   |||||| |||
seq2  TATGCTT-CCTCACTTTTGCACATGCAGGTAG-CTAGGCTTGGTTAGGCA  48

seq1  G-TCGTGTTGTTTGATAATTATGTCTTT-GCTCTTTT--ATCAG-TGTAC  91
      | ||||||||||   ||||||||||||| ||||||||  ||||| |||||
seq2  GTTCGTGTTGTTGATTAATTATGTCTTTGGCTCTTTTTAATCAGTTGTAC  98

seq1  CTTATTCATACAT-AAAGAC-ATGG-AGTTGTTCTATGTAAGACACAGCT  138
       |  | ||||||| |||||| |||| ||||||||||||| ||||||||||
seq2  ATATTCCATACATAAAAGACAATGGAAGTTGTTCTATGT-AGACACAGCT  147

seq1  AGTGATTGGTCTTCAGCACTATACTGTTACCTGAAGGACAAGTGTTGTCC  188
      ||||||| |||||||||||||||||||||||||||||||||||| ||| |
seq2  AGTGATT-GTCTTCAGCACTATACTGTTACCTGAAGGACAAGTG-TGT-C  194

seq1  TGTCAAGGAAGGGAAGGAAGAGAACACAGAGCTACTCCAAAGCATTGTGT  238
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGTCAAGGAAGGGAAGGAAGAGAACACAGAGCTACTCCAAAGCA-TGTGT  243

seq1  CTGCAGTAAGCATACTATGTTCTCTATGCAGGAATGAAACGTCTCTGGTT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTAAGCATACTATGTTCTCTATGCAGGAATGAAACGTCTCTGGTT  293

seq1  GTCTGTGCTATTTGAGCACTTTGTCCTCCTTTACTGAATTCTTGGGCACA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGCTATTTGAGCACTTTGTCCTCCTTTACTGAATTCTTGGGCACA  343

seq1  ACAAGCACAGTCCCTCCACAGATTTCAATGGCCACAGCAAAGTGGCCTCT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCACAGTCCCTCCACAGATTTCAATGGCCACAGCAAAGTGGCCTCT  393

seq1  GTTTTAATTTTTTTTCTTCCTCACACAATATGTTCTTTAACACTTAATCT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAATTTTTTTTCTTCCTCACACAATATGTTCTTTAACACTTAATCT  443

seq1  CAGCAGTCCAAGTGGTGTGCATGGCATAGATATCCAGAGCAGAACATTTT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTCCAAGTGGTGTGCATGGCATAGATATCCAGAGCAGAACATTTT  493

seq1  GGAGTTCCTCAGCTGCAGAATAAAGGGTGGATATGCACTCATATTAGACT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTCCTCAGCTGCAGAATAAAGGGTGGATATGCACTCATATTAGACT  543

seq1  CTGTTATATTAGCACTTCCTGCTTATGAATTTATTGACAAAATCACCAAT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTATATTAGCACTTCCTGCTTATGAATTTATTGACAAAATCACCAAT  593

seq1  CAATTTGGATAAACCTGAGCAGATACATCTGCAAAAAAAATAAAAAATAA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGGATAAACCTGAGCAGATACATCTGCAAAAAAAATAAAAAATAA  643

seq1  AAAATAAAAAAAAACAAAAAACAAAAAACAAAAACAAAAACAAAAAAAAC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAAAAAACAAAAAACAAAAAACAAAAACAAAAACAAAAAAAAC  693

seq1  AAAAACAAAAACAAAAAAACGAATTGGGAAATATGAACACAAATTTCCTT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAAACAAAAAAACGAATTGGGAAATATGAACACAAATTTCCTT  743

seq1  ATAGTTGAAACATAGATATTTTTCTCTAACTCCAAATGCTATTTGTGGAA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTGAAACATAGATATTTTTCTCTAACTCCAAATGCTATTTGTGGAA  793

seq1  ATGTTTTCTCTTCCCACTGTCAGTCAGAGGATGTGACTGAGACAGTTTTC  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTCTCTTCCCACTGTCAGTCAGAGGATGTGACTGAGACAGTTTTC  843

seq1  ACATGAGTTTTGTAATTCAGATCCTCCTTTTAAAAGCAAAGTTTATAAAA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGTTTTGTAATTCAGATCCTCCTTTTAAAAGCAAAGTTTATAAAA  893

seq1  TTTTTAAAAAATCTTATGTTTCAAGAAGAAAGCTATATAAGTAAAGAGCC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAAAATCTTATGTTTCAAGAAGAAAGCTATATAAGTAAAGAGCC  943

seq1  CATCGTTGTTTCTCAAAAGTAAAAGAAGCCAGTGGACATATTTATACATG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGTTGTTTCTCAAAAGTAAAAGAAGCCAGTGGACATATTTATACATG  993

seq1  TATCCTATATTTAAATACCTGTATTTAAAAATCTAATCCTACTGACTTTT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTATATTTAAATACCTGTATTTAAAAATCTAATCCTACTGACTTTT  1043

seq1  TATGTCAGCACTCTGGAATCTGAAGCAATCTCCTTTAGAGCAGTCTTTTC  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCAGCACTCTGGAATCTGAAGCAATCTCCTTTAGAGCAGTCTTTTC  1093

seq1  CTGCTTTCAAAGGGAGTATTCTTTTTTTATTCTTTTTTTCTTTCATTGTT  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTCAAAGGGAGTATTCTTTTTTTATTCTTTTTTTCTTTCATTGTT  1143

seq1  TATGTATGTATTTGAATGCTTGTGTGTGATGAATTC  1174
      ||||||||||||||||||||||||||||||||||||
seq2  TATGTATGTATTTGAATGCTTGTGTGTGATGAATTC  1179