BAC Information

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BAC

Clone NameB6Ng01-276K08
Chromosome6 (Build37)
Map Location 10,202,041 - 10,316,453
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC330264
Downstream geneLOC100040285, LOC667650, AA545190
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276K08.bB6Ng01-276K08.g
ACCGA077377GA077378
length1,155995
definitionB6Ng01-276K08.b B6Ng01-276K08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,315,311 - 10,316,453)(10,202,041 - 10,203,008)
sequence
gaattcttaaattatttctacaacaaaatattattctctttaaattttct
gttaagcaacccatattctaaactctcaactctatgaaaatattacattt
ataagaaattcaacttgagagcaaaaggatagcctactgacattttggta
atgcatatttccattttgtttgtctcaacaagattgtacaccacttattc
ttttgtacagttaataagaggatcaatgtgttaaggaaggaatgcctata
ccccagatgtaaacaccaattgagaatcctaaactcccactcctgatttt
tcaccaatgacccacctgaaaacaccttatacatagagaaaacagaatag
cattaaaattatgcaattagaattcacagataaacaagatttttttgtaa
tggtaagtactgtaatatattccttaatgagcctatgctattgaagaaca
tgactagctaacttgaaagcaaggaaggaacgttaatttattgctagttt
actaattctagactaagaattatataaccatgacctagcttcactgaatt
tacaggaactaagttatttcagttctctcagatgtgtgttaccctaatga
tttctggagggaaaatggttaaaaactagtttatggactgttattctact
atttatcagtaaaaccgtatagaatctacttgaagaaaatgaaatatttg
ttaaattatgtgacaaaataggtttggcaactttaatacttacaaactga
attaagtttttgttgccagtatgctttttaaccttgaactcatccactga
ataaaacagatgaaaattgagtgttaaatattatagaaaatatcataatt
caaagcccatttgtataaatcttatagtgatgctttgagttttaaaaaga
ggctttggggggatataaacaaacaatgaatttttgcaatttctatttca
atataacttcttttcagcactccattttcaggcccttagttttgtcattg
aagtccttttgttccaaggacatttctatggaactaaaagagctctggct
catgtgatgaaccactttgcttggatttccactgttcctcagtgtagtcc
tcctcccatgctactgcctgtcattatacacccccccaaatgttgcctgc
atgag

gaattctatcaactgaactgctcagaactgatctgtacataactgcattc
caaactgaactaaacaactcaactgaaatgagttgaactcaattctcttt
tcctcattgctctttaagtagcctctcttttctgcctgatctgctgagag
ctggtcatatcctatttctggctcattctgtcatgtctttctctgattca
tcaatttgtctgttcttcagttagaagttactgtttggaattaaagatga
gtcaagggtatgcctgtattccagccagagtgattaaaggaatgtatttt
ggccagagaaattaaaagtgtgtgacatgctcaggtggatcatatccttg
aatatgatccttcccagagcagccgtgtagataaattaaaattcgtctat
attttacactagcaaaaaaaagaaaaaaagaaaaaagaaaaaaagataga
aaaaagaaaaaagaaaaaaggagagaaaagaaaagaaaagaaaaggaaag
gaaaggaaagaaaagaaaagaaaattgaaagttctacttggaaaaatatg
agattagtgaagagtgaagttggtgttaggaattcagaggactgaaggga
gggaaaactgatgggctattttgtatgagggtaaaataaaaaaaaatcca
aaaaaaacatttaattaattaaaaatcatatatctagccaatatctagga
gttaaatattagagagctagatagtcttttcttttttttttttagattta
agttgctttttatttatttattttttcattttttattaggtatttagctc
atttacatttcccaatgctataccaaaagtcccccattacccaacccacc
cccactcccctacaccaactcccaccttatttggccctggcgtttccctg
tactggggcataataaagatttgctgtccaatggcctcctctttccagtg
atgccgactagccatcttatacaattgcagctagagtcagagctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_10315311_10316453
seq2: B6Ng01-276K08.b_47_1201 (reverse)

seq1  CTCATGCAG--CACATT--GGGGTGTTAATAAATGACA-GCAGTAGCAT-  44
      |||||||||   |||||  |||| ||  || ||||||| |||||||||| 
seq2  CTCATGCAGGCAACATTTGGGGGGGTGTAT-AATGACAGGCAGTAGCATG  49

seq1  GGAG--AGACTACACTGA-GAACAGTG--AAACCAAGCAAAGT-GTTCAT  88
      ||||   ||||||||||| ||||||||  || ||||||||||| ||||||
seq2  GGAGGAGGACTACACTGAGGAACAGTGGAAATCCAAGCAAAGTGGTTCAT  99

seq1  CACATGAGCCAGAGCTCTTTTAGTTCCATAGAAATGTCCTTGGAACAAAA  138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGAGCCAGAGCTCTTTTAGTTCCATAGAAATGTCCTTGGAACAAAA  149

seq1  GGACTTCAATGAC-AAACTAAGGGCCTGAAAATGGAGTGCTGAAAAGAAG  187
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGACTTCAATGACAAAACTAAGGGCCTGAAAATGGAGTGCTGAAAAGAAG  199

seq1  TTATATTGAAATAGAAATTGCAAAAATTCATTGTTTGTTTATATCCCCCC  237
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTGAAATAGAAATTGCAAAAATTCATTGTTTGTTTATATCCCCCC  249

seq1  AAAGCCTCTTTTTAAAACTCAAAGCATCACTATAAGATTTATACAAATGG  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTCTTTTTAAAACTCAAAGCATCACTATAAGATTTATACAAATGG  299

seq1  GCTTTGAATTATGATATTTTCTATAATATTTAACACTCAATTTTCATCTG  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGAATTATGATATTTTCTATAATATTTAACACTCAATTTTCATCTG  349

seq1  TTTTATTCAGTGGATGAGTTCAAGGTTAAAAAGCATACTGGCAACAAAAA  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTCAGTGGATGAGTTCAAGGTTAAAAAGCATACTGGCAACAAAAA  399

seq1  CTTAATTCAGTTTGTAAGTATTAAAGTTGCCAAACCTATTTTGTCACATA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTCAGTTTGTAAGTATTAAAGTTGCCAAACCTATTTTGTCACATA  449

seq1  ATTTAACAAATATTTCATTTTCTTCAAGTAGATTCTATACGGTTTTACTG  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAACAAATATTTCATTTTCTTCAAGTAGATTCTATACGGTTTTACTG  499

seq1  ATAAATAGTAGAATAACAGTCCATAAACTAGTTTTTAACCATTTTCCCTC  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAGTAGAATAACAGTCCATAAACTAGTTTTTAACCATTTTCCCTC  549

seq1  CAGAAATCATTAGGGTAACACACATCTGAGAGAACTGAAATAACTTAGTT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATCATTAGGGTAACACACATCTGAGAGAACTGAAATAACTTAGTT  599

seq1  CCTGTAAATTCAGTGAAGCTAGGTCATGGTTATATAATTCTTAGTCTAGA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAAATTCAGTGAAGCTAGGTCATGGTTATATAATTCTTAGTCTAGA  649

seq1  ATTAGTAAACTAGCAATAAATTAACGTTCCTTCCTTGCTTTCAAGTTAGC  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTAAACTAGCAATAAATTAACGTTCCTTCCTTGCTTTCAAGTTAGC  699

seq1  TAGTCATGTTCTTCAATAGCATAGGCTCATTAAGGAATATATTACAGTAC  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATGTTCTTCAATAGCATAGGCTCATTAAGGAATATATTACAGTAC  749

seq1  TTACCATTACAAAAAAATCTTGTTTATCTGTGAATTCTAATTGCATAATT  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCATTACAAAAAAATCTTGTTTATCTGTGAATTCTAATTGCATAATT  799

seq1  TTAATGCTATTCTGTTTTCTCTATGTATAAGGTGTTTTCAGGTGGGTCAT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGCTATTCTGTTTTCTCTATGTATAAGGTGTTTTCAGGTGGGTCAT  849

seq1  TGGTGAAAAATCAGGAGTGGGAGTTTAGGATTCTCAATTGGTGTTTACAT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAAAAATCAGGAGTGGGAGTTTAGGATTCTCAATTGGTGTTTACAT  899

seq1  CTGGGGTATAGGCATTCCTTCCTTAACACATTGATCCTCTTATTAACTGT  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTATAGGCATTCCTTCCTTAACACATTGATCCTCTTATTAACTGT  949

seq1  ACAAAAGAATAAGTGGTGTACAATCTTGTTGAGACAAACAAAATGGAAAT  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGAATAAGTGGTGTACAATCTTGTTGAGACAAACAAAATGGAAAT  999

seq1  ATGCATTACCAAAATGTCAGTAGGCTATCCTTTTGCTCTCAAGTTGAATT  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTACCAAAATGTCAGTAGGCTATCCTTTTGCTCTCAAGTTGAATT  1049

seq1  TCTTATAAATGTAATATTTTCATAGAGTTGAGAGTTTAGAATATGGGTTG  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAAATGTAATATTTTCATAGAGTTGAGAGTTTAGAATATGGGTTG  1099

seq1  CTTAACAGAAAATTTAAAGAGAATAATATTTTGTTGTAGAAATAATTTAA  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACAGAAAATTTAAAGAGAATAATATTTTGTTGTAGAAATAATTTAA  1149

seq1  GAATTC  1143
      ||||||
seq2  GAATTC  1155


seq1: chr6_10202041_10203008
seq2: B6Ng01-276K08.g_94_1060

seq1  TGATCTGTACATAACTGCATTCCAAACTGAACTAAACAACTCAACTGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGTACATAACTGCATTCCAAACTGAACTAAACAACTCAACTGAAA  50

seq1  TGAGTTGAACTCAATTCTCTTTTCCTCATTGCTCTTTAAGTAGCCTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGAACTCAATTCTCTTTTCCTCATTGCTCTTTAAGTAGCCTCTCT  100

seq1  TTTCTGCCTGATCTGCTGAGAGCTGGTCATATCCTATTTCTGGCTCATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCCTGATCTGCTGAGAGCTGGTCATATCCTATTTCTGGCTCATTC  150

seq1  TGTCATGTCTTTCTCTGATTCATCAATTTGTCTGTTCTTCAGTTAGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGTCTTTCTCTGATTCATCAATTTGTCTGTTCTTCAGTTAGAAGT  200

seq1  TACTGTTTGGAATTAAAGATGAGTCAAGGGTATGCCTGTATTCCAGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTTGGAATTAAAGATGAGTCAAGGGTATGCCTGTATTCCAGCCAG  250

seq1  AGTGATTAAAGGAATGTATTTTGGCCAGAGAAATTAAAAGTGTGTGACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTAAAGGAATGTATTTTGGCCAGAGAAATTAAAAGTGTGTGACAT  300

seq1  GCTCAGGTGGATCATATCCTTGAATATGATCCTTCCCAGAGCAGCCGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGTGGATCATATCCTTGAATATGATCCTTCCCAGAGCAGCCGTGT  350

seq1  AGATAAATTAAAATTCGTCTATATTTTACACTAGCAAAAAAAAGAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAATTAAAATTCGTCTATATTTTACACTAGCAAAAAAAAGAAAAAA  400

seq1  AGAAAAAAGAAAAAAAGATAGAAAAAAGAAAAAAGAAAAAAGGAGAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAGAAAAAAAGATAGAAAAAAGAAAAAAGAAAAAAGGAGAGAAA  450

seq1  AGAAAAGAAAAGAAAAGGAAAGGAAAGGAAAGAAAAGAAAAGAAAATTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAAAAGAAAAGGAAAGGAAAGGAAAGAAAAGAAAAGAAAATTGA  500

seq1  AAGTTCTACTTGGAAAAATATGAGATTAGTGAAGAGTGAAGTTGGTGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTACTTGGAAAAATATGAGATTAGTGAAGAGTGAAGTTGGTGTTA  550

seq1  GGAATTCAGAGGACTGAAGGGAGGGAAAACTGATGGGCTATTTTGTATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCAGAGGACTGAAGGGAGGGAAAACTGATGGGCTATTTTGTATGA  600

seq1  GGGTAAAATAAAAAAAAATCCAAAAAAAACATTTAATTAATTAAAAATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAAATAAAAAAAAATCCAAAAAAAACATTTAATTAATTAAAAATCA  650

seq1  TATATCTAGCCAATATCTAGGAGTTAAATATTAGAGAGCTAGATAGTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTAGCCAATATCTAGGAGTTAAATATTAGAGAGCTAGATAGTCTT  700

seq1  TTCTTTTTTTTTTTTAGATTTAAGTTGCTTTTTATTTATTTATTTTTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTTTTTAGATTTAAGTTGCTTTTTATTTATTTATTTTTTCA  750

seq1  TTTTTTATTAGGTATTTAGCTCATTTACATTT-CCAATGCTATACCAAAA  799
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTTTTATTAGGTATTTAGCTCATTTACATTTCCCAATGCTATACCAAAA  800

seq1  GTCCCCCA-TACCC-ACCCACCCCCACTCCCCTACCACCCACTCCC-CCT  846
      |||||||| ||||| ||||||||||||||||||| |||| |||||| |||
seq2  GTCCCCCATTACCCAACCCACCCCCACTCCCCTA-CACCAACTCCCACCT  849

seq1  T-TTTGGCCCTGGCGTTCCCCTGTACTGGGGCAT-ATAAAG-TTTGCGTG  893
      | ||||||||||||||| |||||||||||||||| |||||| ||||| ||
seq2  TATTTGGCCCTGGCGTTTCCCTGTACTGGGGCATAATAAAGATTTGC-TG  898

seq1  TCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTAATA  943
      |||||||| |  |||||||||||||| |||||||| ||||||||   |||
seq2  TCCAATGGCCTCCTCTTTCCAGTGAT-GCCGACTA-GCCATCTT---ATA  943

seq1  CACATGCAGCTAGAGTCAAGAGCTC  968
      ||  ||||||||||||| |||||||
seq2  CAATTGCAGCTAGAGTC-AGAGCTC  967


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