BAC Information

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BAC

Clone NameB6Ng01-277N21
Chromosome6 (Build37)
Map Location 64,868,865 - 64,869,315
singlet/doubletsinglet
Overlap genenone
Upstream geneGrid2, Atoh1
Downstream geneLOC100041833, LOC667115, Smarcad1, Ptgds2, LOC100042741, LOC100041858, LOC634745, EG667141, C130060K24Rik, 9030611K07Rik, A930038C07Rik, LOC667160, Prdm5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277N21.bB6Ng01-277N21.g
ACCGA078267GA078268
length4451,056
definitionB6Ng01-277N21.b B6Ng01-277N21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tcattttttgtttgtttgtgtgtttgtttggtcttattgttttttttgtt
ttttgtttttttttgagaccaagtttctctgcgtaacagtcctggctatt
ctggaactgctctgtggaccaggctggccactgttgtcgtatttgtagtt
attattattattttaaatagtatttcttttatttttaagatttatttatt
tattatatgtaagtacattgtagctgtcttcagacacaccagaagaggga
gtcagatctcattacggatggttatgagccaccatgtggttgctgggatt
tgaactcgggaccttcagaagagcagtcgggtgctcttacccactgagcc
atctcaccagctgatagactctttttcattgattatatttgttacagatg
cgcgcgtgcgcgcgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gaattcagtttatttttctgtatgtaaggttgacctttgaaccatgtttg
gaaggggtttaaatacagactttttgagtgatttgtaacaacttgaaaca
gctctcatataaccttcacaacctagaaaggttttaagaaaaaaaaggat
ggcagagttggacgggacaacccaacataaaaaaaaagattaccaaaagc
aggcacaagagtcagagaccctctcgttctcatactcaaaagtcccataa
aaattcttagctaatagctataacatgccaagaggaccctgtgcttgctg
atttagtctctgtgaactcataggaaccttgtttagttgattcagagggc
ttgttctcctggtggtctctaccttctttggttcttaaaatatttctgtc
tcccttccatgtaattccctgagctctgagaggagaaatttgattgagac
cttccatttagactctctacacagaatgtctgtctgtgggtctctgcatc
tcttcccattttccacagtacgaagcctctctgatggtgactgaataaga
aactgatggactcgtataacagaatatcattaagagtaatttaattgatc
acctgccttttttagactggtagtgttttttaaccttagtctctattccc
ttgttcttggttaatcactcaatgtcaggtatgggctccttctcctggag
taggacttaggtcaaatcagacaatggtttgctaggataggttttgcttc
acctaattatattttattttgtcatgatttgttatctcttagaagcctat
tttttttccagaaagggagtgaatcagaagggaagggggtgggaaggaac
tgggagggagtagaaggatgggaagccattgatcaggatatattgcatga
taaaacaatcttttatcataaaagaaaaatgtatgtcagtaatgtataac
ttaagagacagtagttattgtccatcctattgctaaatatgtatcaccaa
tgatggagacttatgcctatccacgaattgccatgacgcctcatttgcct
tccaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_64868865_64869315
seq2: B6Ng01-277N21.b_45_495 (reverse)

seq1  ACACACACACACACACACACACACACACATGCGCGCGCACGCGCGCATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACATGCGCGCGCACGCGCGCATCT  50

seq1  GTAACAAATATAATCAATGAAAAAGAGTCTATCAGCTGGTGAGATGGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAAATATAATCAATGAAAAAGAGTCTATCAGCTGGTGAGATGGCTC  100

seq1  AGTGGGTAAGAGCACCCGACTGCTCTTCTGAAGGTCCCGAGTTCAAATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTAAGAGCACCCGACTGCTCTTCTGAAGGTCCCGAGTTCAAATCC  150

seq1  CAGCAACCACATGGTGGCTCATAACCATCCGTAATGAGATCTGACTCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACCACATGGTGGCTCATAACCATCCGTAATGAGATCTGACTCCCT  200

seq1  CTTCTGGTGTGTCTGAAGACAGCTACAATGTACTTACATATAATAAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGTGTGTCTGAAGACAGCTACAATGTACTTACATATAATAAATAA  250

seq1  ATAAATCTTAAAAATAAAAGAAATACTATTTAAAATAATAATAATAACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCTTAAAAATAAAAGAAATACTATTTAAAATAATAATAATAACTA  300

seq1  CAAATACGACAACAGTGGCCAGCCTGGTCCACAGAGCAGTTCCAGAATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACGACAACAGTGGCCAGCCTGGTCCACAGAGCAGTTCCAGAATAG  350

seq1  CCAGGACTGTTACGCAGAGAAACTTGGTCTCAAAAAAAAACAAAAAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACTGTTACGCAGAGAAACTTGGTCTCAAAAAAAAACAAAAAACAA  400

seq1  AAAAAACAATAAGACCAAACAAACACACAAACAAACAAAAAATGAGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAATAAGACCAAACAAACACACAAACAAACAAAAAATGAGAATT  450

seq1  C  451
      |
seq2  C  451