BAC Information

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BAC

Clone NameB6Ng01-279C08
Chromosome6 (Build37)
Map Location 9,616,377 - 9,617,464
singlet/doubletsinglet
Overlap genenone
Upstream geneIca1, LOC100040238, Nxph1
Downstream geneLOC330264
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279C08.bB6Ng01-279C08.g
ACCGA079201GA079202
length3141,085
definitionB6Ng01-279C08.b B6Ng01-279C08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcagtttagttctatactccaattttgagggtccaagtgaggacgactca
gtctcacttggaagggagaagaaagcaataacgagtagggtgaaaggggg
gacctgcgagggaaagtgggtgggagtttgggggagaaagaggaacctga
tctggcactgagtgagggaaaatgactatagcccccgagggccagcagaa
agaatgcacactgtcaacctcaggaggtaggaggtggggggaccctactc
gatgcttcctacctctgggatgcgattcactctcccgaatcaaatggtta
tttccttggaggca

gaattcttacctccaaataattttgtgaaagcttgaacatttgccagtta
aaaatatcagtttttttttttaatcatgttacagaaactgtttggtaggc
cactgggataattagagaagagcagaggatgtttaatgagtttttcaggg
tgcagatgagagtgtatcatgtacaatcatgtgctgctgataattttatc
cttcattctctggatggtatgatatcctggtgatggaatgcttaaattag
agatccaagaaaactcagtcatccagaaaataatagctttcttagatata
ttcttaaggagaggtgggttttcacccctctgtcagctgcccagggcctg
atattcttcctcatgtacagatcaatataaatgaaccagtagtccatttc
caaaaaaaacgtcttttgtatgttcaaagaatggaaatggtagaatttta
taattaaatgaaaatatcacagttaggcatggtcttgggacttgtctata
ttcattatgtaccttgataatctgtccaggttttggaagcaaggaagcag
gaacttcaaagcagatcacttaggctagacctttcatctgaagatcatta
aaaatcgccgcacacatactttgcaagggattgtgttgaacaaactctgt
gggggaaatgctgagctagaaccaaaacaagagagaggatgtagaaaatg
gaaggtgctttatctttcattgctatgatgaaaaggagatgaagccttgg
attgtgatagacacggacaacatagtaccacaccgaaagcgttctgcact
aaagccagtacactgaaagagtttaagtattttgggtgggtgtctggaca
gtaggatggactaattcaggagggatgaaaatcatatgtgtggcttatcc
tttgtaactctttaaagactgttttgattgagaaacagcagcttaggtaa
catggtagcattattatcaccaagttttcatagccccaataattataaga
cttagcattagtctattggttggtgctgatcctctagactgtaggtcatc
aattggtgaccatagtacatctgtcagtagtttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_9616377_9617464
seq2: B6Ng01-279C08.g_64_1148

seq1  GAATTCTTACCTCCAAATAATTTTGTGAAAGCTTGAACATTTGCCAGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACCTCCAAATAATTTTGTGAAAGCTTGAACATTTGCCAGTTA  50

seq1  AAAATATCAGTTTTTTTTTTTAATCATGTTACAGAAACTGTTTGGTAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATCAGTTTTTTTTTTTAATCATGTTACAGAAACTGTTTGGTAGGC  100

seq1  CACTGGGATAATTAGAGAAGAGCAGAGGATGTTTAATGAGTTTTTCAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGATAATTAGAGAAGAGCAGAGGATGTTTAATGAGTTTTTCAGGG  150

seq1  TGCAGATGAGAGTGTATCATGTACAATCATGTGCTGCTGATAATTTTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATGAGAGTGTATCATGTACAATCATGTGCTGCTGATAATTTTATC  200

seq1  CTTCATTCTCTGGATGGTATGATATCCTGGTGATGGAATGCTTAAATTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTCTCTGGATGGTATGATATCCTGGTGATGGAATGCTTAAATTAG  250

seq1  AGATCCAAGAAAACTCAGTCATCCAGAAAATAATAGCTTTCTTAGATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCAAGAAAACTCAGTCATCCAGAAAATAATAGCTTTCTTAGATATA  300

seq1  TTCTTAAGGAGAGGTGGGTTTTCACCCCTCTGTCAGCTGCCCAGGGCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAGGAGAGGTGGGTTTTCACCCCTCTGTCAGCTGCCCAGGGCCTG  350

seq1  ATATTCTTCCTCATGTACAGATCAATATAAATGAACCAGTAGTCCATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTTCCTCATGTACAGATCAATATAAATGAACCAGTAGTCCATTTC  400

seq1  CAAAAAAAACGTCTTTTGTATGTTCAAAGAATGGAAATGGTAGAATTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAACGTCTTTTGTATGTTCAAAGAATGGAAATGGTAGAATTTTA  450

seq1  TAATTAAATGAAAATATCACAGTTAGGCATGGTCTTGGGACTTGTCTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAATGAAAATATCACAGTTAGGCATGGTCTTGGGACTTGTCTATA  500

seq1  TTCATTATGTACCTTGATAATCTGTCCAGGTTTTGGAAGCAAGGAAGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTATGTACCTTGATAATCTGTCCAGGTTTTGGAAGCAAGGAAGCAG  550

seq1  GAACTTCAAAGCAGATCACTTAGGCTAGACCTTTCATCTGAAGATCATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTCAAAGCAGATCACTTAGGCTAGACCTTTCATCTGAAGATCATTA  600

seq1  AAAATCGCCGCACACATACTTTGCAAGGGATTGTGTTGAACAAACTCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCGCCGCACACATACTTTGCAAGGGATTGTGTTGAACAAACTCTGT  650

seq1  GGGGGAAATGCTGAGCTAGAACCAAAACAAGAGAGAGGATGTAGAAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAAATGCTGAGCTAGAACCAAAACAAGAGAGAGGATGTAGAAAATG  700

seq1  GAAGGTGCTTTATCTTTCATTGCTATGATGAAAAGGAGATGAAGCCTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGCTTTATCTTTCATTGCTATGATGAAAAGGAGATGAAGCCTTGG  750

seq1  ATTGTGATAGACACGGACAACATAGTACCACACCGAAGGCGTTCTGCACT  800
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATTGTGATAGACACGGACAACATAGTACCACACCGAAAGCGTTCTGCACT  800

seq1  AAAGCCAGTACACTGAAAGAGTTTAAGTATTTTGGGTGGGTGTCTGGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAGTACACTGAAAGAGTTTAAGTATTTTGGGTGGGTGTCTGGACA  850

seq1  GTAGGATGGACTAATTCAGGAGGGATGAAAATCATATGTGTGGCTTATCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGATGGACTAATTCAGGAGGGATGAAAATCATATGTGTGGCTTATCC  900

seq1  TTTGTAACTCTTTAAAGACTG-TTTGATTGAGAAACAGCAGCTTAGGTAA  949
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTTGTAACTCTTTAAAGACTGTTTTGATTGAGAAACAGCAGCTTAGGTAA  950

seq1  CATGGTAGCATTATTATCACCAAGTTTTCATAGCCCCAATAATTAT-AGA  998
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CATGGTAGCATTATTATCACCAAGTTTTCATAGCCCCAATAATTATAAGA  1000

seq1  CTTAAGCATTAGTCTA-TGGTTGGTGCTGGATCTCTTAGACTGTAGGTCA  1047
      ||| |||||||||||| ||||||||||| ||||   ||||||||||||||
seq2  CTT-AGCATTAGTCTATTGGTTGGTGCT-GATCCTCTAGACTGTAGGTCA  1048

seq1  TCAATTGGTGACCCATAGGTTACATCTGTCAAGTAGTTTCT  1088
      ||||||||||| ||||||  |||||||||| ||||||||||
seq2  TCAATTGGTGA-CCATAG--TACATCTGTC-AGTAGTTTCT  1085


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