BAC Information

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BAC

Clone NameB6Ng01-279O02
Chromosome6 (Build37)
Map Location 19,702,893 - 19,704,013
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
Downstream geneLOC100040838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279O02.bB6Ng01-279O02.g
ACCGA079747GA079748
length1,1931,152
definitionB6Ng01-279O02.b B6Ng01-279O02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgagactaaaaagtaggctcagggaatcccatttcagagcaca
ggaattctaagactccctgtgtccgactcctgctagaatcacagagaata
tatgctttctaacacagattagacagcatttagaaaataatgattagtgg
aaaggaaggagaaaaccatggagacagatcctctgagaaaataatgatgt
cataaaagagtttaaacctaaataaggacatttagtcatttagttggcat
attattacacagttttatgtcaacttgatacaagttaaaaagtcatctaa
aaggaggatacttcaactaagaaaatatcctaaaggcccccttttttatg
attgattggggatgacagcccattgtgggtgatgtttactgggctgcaat
ttttgctgttatacaagaaagcaggctgatcaagcgatgaagagcaaagc
agtaaataccattcctccatggcctccatatctgctctttctttgtttga
gattatatccgactttcttcaataatggactagaatgtagcagtttaagt
aaaaaaaaaaaaaagtttcctccaaggttgcttgggtaattgtgtttcat
tacagcagcataaatcccaagataatttcacagtggttattaagcttgtg
gtatttcaaagcaaatagaataagactagcaccaaaatttacatgaactg
gctcctaaataaagtcaacacttatcaggtggaactgtgactatggatga
tgccatctgccatgcactctggtcgagtcagcttgacaggccgagagact
tggaagctactcacgaggcagaagagtttcatggaaactcactcctggag
tctgacgttctctctaacccatacattaattctccattcccgagttagtc
tagtgtatggatccatgtgctctcttttagtattaccctattaataaagt
gccttttaagattgaattctgacatagctaaagccctttgccagtgttca
agtagtcctagaaagtccttgagcaagaccatggcttggaaattcagtaa
gaatgtgctattcagtgaacattcagaatgctctggtactacactatcac
ttgagtaaaagtcactgcttaaccagatgacattcacctagagatgagtt
cgaactagatacgatagaatcttagaaaactatatagcctgga

gaattcttagctagctgttattctcaggactgctccacttgaaaaatctt
gtctaatgttctaatatgttaattcagaataaatttgaacctttgaaact
tcaaatgtctaaaggtattgggagagagatggaggtaaaaacaactaatg
ttcagattccttttattaaaaataaaatacttggtgtaaagctgcaatta
tcagtgctagtagacagaataacaatattttttgtgtatctgtgtgtttc
ttatcacatgtacaccctctaaacatcttgaactctgtcttcacatttct
tgttctgttctgtttttttcctgatttcagttttgcaggaggcactcact
atattttacacacagttcttaaactcaccatgttctttctgtacaaacat
gatcaaccctgaattctcattttaccaacctttatggcagtattttggtt
tgctgttggctggcaggtttagaaagtaagctgaaatgagttctactttt
aagaatcttttctctttatccatggaacctttttttttttccttttagct
ctaggcactgacaataaacatactagtgataatagataccacctgctgtt
tgtagtgtttaaaattgtctgttgggagaaatgagactgtcaaccattat
aagaagccaggtaatatgcttatatctgagaattatagaagcaagacaca
atacaagataatggtacccatgggttattgtccccattgccatcccagtt
aaagttcttatgattgcacagaaaaggaagttttgctcccagaggactga
aggcaattttatgagaagtagtaaaaaacgaacctcaagggtgtgagggt
cccctggctctctcatacctgggtatcccctcaagtctctatgtctacct
atcacaacttcataagtctatgtggctttctcattttccacagacccatc
tggtttcattgctgcatttttatccatctaccactaattgtcctctctgt
ttgtgtaaaactcttacaaagaatatcataacttcactttcaatcacggc
tttctgactcaagggactaatcaatcatccgtggagaactcctttttttc
cattttctccagagaaaatccaatcttggaaacgaaaggaataattctta
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19702893_19704013
seq2: B6Ng01-279O02.g_69_1220

seq1  GAATTCTTAGCTAGCTGTTATTCTCAGGACTGCTCCACTTGAAAAATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGCTAGCTGTTATTCTCAGGACTGCTCCACTTGAAAAATCTT  50

seq1  GTCTAATGTTCTAATATGTTAATTCAGAATAAATTTGAACCTTTGAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAATGTTCTAATATGTTAATTCAGAATAAATTTGAACCTTTGAAACT  100

seq1  TCAAATGTCTAAAGGTATTGGGAGAGAGATGGAGGTAAAAACAACTAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGTCTAAAGGTATTGGGAGAGAGATGGAGGTAAAAACAACTAATG  150

seq1  TTCAGATTCCTTTTATTAAAAATAAAATACTTGGTGTAAAGCTGCAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATTCCTTTTATTAAAAATAAAATACTTGGTGTAAAGCTGCAATTA  200

seq1  TCAGTGCTAGTAGACAGAATAACAATATTTTTTGTGTATCTGTGTGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCTAGTAGACAGAATAACAATATTTTTTGTGTATCTGTGTGTTTC  250

seq1  TTATCACATGTACACCCTCTAAACATCTTGAACTCTGTCTTCACATTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCACATGTACACCCTCTAAACATCTTGAACTCTGTCTTCACATTTCT  300

seq1  TGTTCTGTTCTGTTTTTTTCCTGATTTCAGTTTTGCAGGAGGCACTCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGTTCTGTTTTTTTCCTGATTTCAGTTTTGCAGGAGGCACTCACT  350

seq1  ATATTTTACACACAGTTCTTAAACTCACCATGTTCTTTCTGTACAAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTACACACAGTTCTTAAACTCACCATGTTCTTTCTGTACAAACAT  400

seq1  GATCAACCCTGAATTCTCATTTTACCAACCTTTATGGCAGTATTTTGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAACCCTGAATTCTCATTTTACCAACCTTTATGGCAGTATTTTGGTT  450

seq1  TGCTGTTGGCTGGCAGGTTTAGAAAGTAAGCTGAAATGAGTTCTACTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTGGCTGGCAGGTTTAGAAAGTAAGCTGAAATGAGTTCTACTTTT  500

seq1  AAGAATCTTTTCTCTTTATCCATGGAACCTTTTTTTTTTTCCTTTTAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCTTTTCTCTTTATCCATGGAACCTTTTTTTTTTTCCTTTTAGCT  550

seq1  CTAGGCACTGACAATAAACATACTAGTGATAATAGATACCACCTGCTG-T  599
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTAGGCACTGACAATAAACATACTAGTGATAATAGATACCACCTGCTGTT  600

seq1  TGTAGTGTTTAAAATTGTCTGTTGGGAGAAATGAGACTGTCAACCATTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTGTTTAAAATTGTCTGTTGGGAGAAATGAGACTGTCAACCATTAT  650

seq1  AAGAAGCCAGGTAATATGC-TATATCTGAGAATTATAGAAGCAAGACACA  698
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAGAAGCCAGGTAATATGCTTATATCTGAGAATTATAGAAGCAAGACACA  700

seq1  ATACAAGATAATGGTACCCATGGGTTATTGTCCCCATTGCCATCCCAGTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGATAATGGTACCCATGGGTTATTGTCCCCATTGCCATCCCAGTT  750

seq1  AAAGTTCTTATGATTGCACAGAAAAGGAAGTTTTGCT-CCAGAGGACTGA  797
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAAGTTCTTATGATTGCACAGAAAAGGAAGTTTTGCTCCCAGAGGACTGA  800

seq1  AGGCAATTTTATGAGAAGTAGTAAAAAACGAACC-CAAGGGTGTGAGGGT  846
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGGCAATTTTATGAGAAGTAGTAAAAAACGAACCTCAAGGGTGTGAGGGT  850

seq1  CCCCTGGCTCTCTCATACCTGGGTAT-CCCTCAAGCCTCTATGTCTACCT  895
      |||||||||||||||||||||||||| |||||||| ||||||||||||||
seq2  CCCCTGGCTCTCTCATACCTGGGTATCCCCTCAAGTCTCTATGTCTACCT  900

seq1  ATCACAACTTCATAAGTCTATGTGGC-TTCTCA-TTTCCACAGACCCATC  943
      |||||||||||||||||||||||||| |||||| ||||||||||||||||
seq2  ATCACAACTTCATAAGTCTATGTGGCTTTCTCATTTTCCACAGACCCATC  950

seq1  T-GTTTCA-TGCTGCATTTTAAT-CATCTACCACTAA-TGT-CTCTCTG-  987
      | |||||| ||||||||||| || ||||||||||||| ||| ||||||| 
seq2  TGGTTTCATTGCTGCATTTTTATCCATCTACCACTAATTGTCCTCTCTGT  1000

seq1  TTGTGTAAAACTC-TAC-AAGAATATCATAAC-TCACTT--CATCAC-GC  1031
      ||||||||||||| ||| |||||||||||||| ||||||   ||||| ||
seq2  TTGTGTAAAACTCTTACAAAGAATATCATAACTTCACTTTCAATCACGGC  1050

seq1  TCTC-AACTCCA-GGACCTATC-ATCATC--TGGAGA----CTCTTTTTC  1072
      | ||  |||| | ||||  ||| ||||||  ||||||    || ||||||
seq2  TTTCTGACTCAAGGGACTAATCAATCATCCGTGGAGAACTCCTTTTTTTC  1100

seq1  TA-TTTCT-CAGTAGAAATCC-ATCTTGAAAACTGAGGGAATAATTCTTA  1119
       | ||||| |||   |||||| |||||| ||||  | |||||||||||||
seq2  CATTTTCTCCAGAGAAAATCCAATCTTGGAAACGAAAGGAATAATTCTTA  1150

seq1  TG  1121
      ||
seq2  TG  1152


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