MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-280C09
Chromosome	6 (Build37)
Map Location	27,222,542 - 27,223,593
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100041247
Downstream gene	Grm8, 6530409C15Rik, AA407452, LOC100041304
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100041247 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041247
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Grm8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14823 MGI:1351345
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6530409C15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76224 MGI:1923474
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	AA407452 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627049 MGI:1889334
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041304 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041304
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs

name	LOC100041247 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254876 GeneID:100041247
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : hypothetical protein LOC100041247 transcript_id : XM_001476040.1

name	Grm8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116812903 GeneID:14823 MGI:1351345
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, metabotropic 8 transcript_id : NM_008174.2

name	6530409C15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377088 GeneID:76224 MGI:1923474
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6530409C15 gene transcript_id : XM_994638.1

name	AA407452 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126157487 GeneID:627049 MGI:1889334
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : EST AA407452 transcript_id : NM_001081678.1

name	LOC100041304 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254878 GeneID:100041304
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs product : similar to Prion-like-(Q/N-rich)-domain-bearing protein family member (pqn-75) transcript_id : XM_001476129.1

name	LOC100041247 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254877 GeneID:100041247
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476090.1

name	Grm8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116812904 GeneID:14823 MGI:1351345
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0001642 - group III metabotropic glutamate receptor activity [Evidence IDA]; GO:0008067 - metabotropic glutamate, GABA-B-like receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence TAS]; GO:0035249 - synaptic transmission, glutamatergic [Evidence TAS] codon_start : 1 note : G protein coupled receptor, family C, group 1, member H; G protein-coupled receptor, family C, group 1, member H product : glutamate receptor, metabotropic 8 protein_id : NP_032200.2

name	6530409C15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94377089 GeneID:76224 MGI:1923474
definition	codon_start : 1 product : hypothetical protein LOC76224 protein_id : XP_999732.1

name	AA407452 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126157488 GeneID:627049 MGI:1889334
definition	codon_start : 1 product : hypothetical protein LOC627049 protein_id : NP_001075147.1

name	LOC100041304 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254879 GeneID:100041304
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476179.1

name	(CDS detail)
type	STS
link
xref	UniSTS:130702
definition	standard_name : D6Mit158

name	(CDS detail)
type	STS
link
xref	UniSTS:225261
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:125586
definition	standard_name : Results_ER_9_1_95_2_16.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130847
definition	standard_name : D6Mit297

name	(CDS detail)
type	STS
link
xref	UniSTS:116593
definition	standard_name : D6Mit152

name	(CDS detail)
type	STS
link
xref	UniSTS:435532
definition	standard_name : REN110736

name	(CDS detail)
type	STS
link
xref	UniSTS:124047
definition	standard_name : 33.MMHAP68FRC12.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:123707
definition	standard_name : 25.MMHAP9FRA10.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130990
definition	standard_name : D6Mit89

name	(CDS detail)
type	STS
link
xref	UniSTS:121933
definition	standard_name : d4mit9

name	(CDS detail)
type	STS
link
xref	UniSTS:438993
definition	standard_name : REN114198

name	(CDS detail)
type	STS
link
xref	UniSTS:284163
definition	standard_name : ECD03076

name	(CDS detail)
type	STS
link
xref	UniSTS:439570
definition	standard_name : REN114775

name	(CDS detail)
type	STS
link
xref	UniSTS:161423
definition	standard_name : RH124601

name	(CDS detail)
type	STS
link
xref	UniSTS:439653
definition	standard_name : REN114858

name	(CDS detail)
type	STS
link
xref	UniSTS:439654
definition	standard_name : REN114859

name	(CDS detail)
type	STS
link
xref	UniSTS:298064
definition	standard_name : ECD17051

clone name	MSMg01-399F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531O18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-451F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055P24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-144N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529A01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-455D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247G09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-280C09.b	B6Ng01-280C09.g
ACC	GA079950	GA079951
length	1,216	1,059
definition	B6Ng01-280C09.b	B6Ng01-280C09.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttgttcagctctgagccccattttttaatggggttgtttgatt ttctggagtccaccttcttgagttctttatatatattggatattagtccc ctatctgatttgggataggttaagatcctttcccaatctgttggtggcct ttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttta tgaggtcccatttatagattcttgatcttacagcacaagccattgctgtt ctattcaggaatttttcccctgtacccatatcttcaaggcttatccctac tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa tccacttagatttgaccttagtacaaggagatagaaatggatcaattcgc attcttctacatgataaccgccagttgtgccagcaccatttgttgaaaat gctgtcttttttccactggatggttttagctcccttgtcaaagatcaagt aaccataggtgtgtggattcatctctgggtcttcaattctgttcccttgg tctacttgtctgtcactataccagtaccatgcagttttgatcacaattgc tctgtagtacagttttaggtccggcatggtgattccaccagaggttcttt tatccttgagaagagtttttgctatcctcggttttttgttattccagatg aatctgccaattgtcctttcttattcgttgaagaattgagttggaatttt gatggggattgcaatgaatctgtagattgcttttggcaagatggccattt ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt ctgagatcttctttaatttctttctttagagacttgaagttcttatcata cagatctttcacttccttagttagagtcacaccaagtatttatattattt gtgactattgagaggtgtttccctaatttctttctcagctgtttattttt tgttgtagaagaaaggccattgacttgtttggagttaaattttatatcag cttactcaccgagccatttatcaagcttagagtctctgggtggaatttta ggtcacttatattacatatccaatcatctgcaaagggatatttgacttct ccttacctttgatgcctgaattcttgtgttcaaatgcctggcaggcacat cagatcatacgtgtga	gaattcttttacctaagtttattttaataaatagctgatacatagttggt tttatatgaagtctgatttaactcatagtagagtgcttaataggtctaat gcatttgtgtagcctatattcttctctaacactgctccattagaaaagtg tctcctgtaaaacttgtcgtcctccctagcaggggtcaaaacctttcagc acctacttacagtagaaatttgagaattctaccctccactatggtaattt tttcttaaagatttttctgggagcacagagggagttataggttgggacag tggcagcatctttgagcaggatttagcatgtgtttggtagtggtccataa gacctgtgatttaaaatgaactgcctgtgtcccatagataagcaaatgca aagttgcacacacacacacaaaaatacagtattatattctttcgaattga ccttgtgttttattctggacaagaaatgtcacatctaatctcagcatgcc agagggaatgctaaaaatgtagcttcaagtaatattcagcaaatgtcact tgtagacaatgagagatgtattagtgtgaccttgggccaagtctgacctg agtttaagaaaaattagcttatgatagggaatactagaggcttaaatcaa tgatagtatgccacaaactaattctatttttaaagtaatttaaacacgag gataaccattaagatatgaacagccattgaaaggctaatttaatttatta tgttgttttaatctttacaaaaattaacatttcaacttaacaatatttta ccttttatgtttcagttacataattcctaaccagaaacattttttttttg ttttttctgcctttactcagtattctacgtatttacctctattttgatac cagaaagaataattttctaataatatactatgcagcatattatgttttgt tcagaactgtgggtagaagtgatatcttaaacttttttatgcacctcatt acttttcccatttaatttattgaaattgtaattgataattatttaatagc attttcttt
quality values	Open. Hide. 62 31 35 24 62 62 62 62 62 49 62 62 26 14 54 62 62 62 62 62 59 59 62 62 62 59 46 62 62 51 24 30 19 18 18 19 32 32 32 30 31 34 54 49 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 56 62 62 62 62 62 62 62 62 62 62 62 62 59 50 50 46 32 48 49 56 56 59 59 56 54 54 54 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 56 56 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 58 58 40 58 54 58 47 54 58 58 54 58 58 52 58 58 58 58 52 54 58 58 58 58 54 46 58 52 52 54 58 58 58 58 54 58 58 54 58 52 52 33 54 52 50 39 54 58 58 58 42 54 39 49 50 58 54 42 58 46 42 52 58 58 52 58 42 31 49 46 42 30 52 49 39 50 58 33 58 35 48 51 49 58 58 53 41 47 52 50 50 54 54 58 19 58 50 33 51 40 50 58 58 58 54 38 39 49 50 47 58 58 49 53 38 32 32 58 58 58 58 51 36 19 28 40 37 50 42 43 29 37 58 25 49 49 50 50 47 51 40 51 27 33 50 41 36 53 50 52 52 40 58 58 52 28 52 49 31 41 39 31 46 50 37 50 51 18 58 33 17 47 41 58 32 39 51 58 50 52 33 30 54 54 51 32 39 23 49 49 38 50 40 36 32 52 32 35 33 45 42 53 39 32 45 45 49 38 53 26 31 30 49 41 37 33 54 54 37 32 37 21 37 41 28 52 28 52 45 40 45 31 33 54 54 54 54 36 35 15 51 32 53 30 45 45 40 37 30 53 31 47 30 40 32 41 40 31 25 29 40 40 53 24 31 29 32 53 53 33 31 28 37 22 42 30 51 30 26 38 28 31 31 30 29 31 31 26 40 20 31 24 32 31 18 31 28 51 26 18 44 31 46 30 38 29 47 31 31 31 46 32 31 25 41 31 31 24 31 33 32 30 32 25 23 28 22 16 28 30 27 28 25 38 31 37 32 31 31 36 31 33 46 31 31 19 32 22 28 35 32 26 27 42 28 37 27 32 35 31 19 32 27 16 11 15 11 16 7 5 9 6 17 43 47 26 31 31 22 20 30 18 25 48 30 28 28 27 34 24 31 23 23 29 31 28 23 18 9 29 15 17 8 48 24 14 27 28 23 21 23 21 43 19 14 12 37 15 22 28 27 27 14 30 8 31 19 43 19 10 7 33 33 39 37 30 12 8 8 11 6 5 5 6 9 5 20 38 18 17 14 13 19 12 14 15 25 14 19 13 14 14 19 17 16 21 8 12 9 15 25 10 29 6 21 29 27 13 7 7 4 4 13 9 16 13 10 11 13 7 12 3 5 15 27 9 15 8 15 9 5 21 28 23 9 14 4 4 3 14 7 13 15 10 16 6 4 3 4 4 6 9 14 23 16 7 16 23 7 17 3 16 26 21 16 22 24 4 6 5 6 7 5 10 12 6 4 14 11 9 4 5 11 5 4 6 11 8 7 8 6 6 15 13 18 15 12 28 12 2 14 6 8 5 3 1 26 13 5 3 6 11 7 6 6 1 7 1 3 4 4 3 1 3 3 6 3 6 9 14 14 5 5 4 8 8 5 3 3 1 4 7 11 5 12 16 10 11 8 11 5 15 4 4 11 17 6 3 7 11 6 15 6 3 5 8 7 5 3 1 2 6 5 6 7 8 8 4 2 1 3	Open. Hide. 62 49 54 47 62 62 62 62 62 54 15 25 25 18 13 13 13 28 28 21 33 28 38 38 46 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 51 49 50 31 28 32 48 32 43 62 62 54 59 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 46 62 62 49 49 49 46 46 56 46 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 47 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 52 58 58 58 58 54 58 58 58 54 58 58 58 58 58 54 58 58 58 58 58 58 58 58 54 58 50 58 58 58 58 58 58 54 58 54 52 58 58 58 58 58 58 58 42 39 58 54 52 45 54 54 54 58 58 58 58 54 42 58 58 58 45 58 58 42 39 34 58 52 58 54 58 58 46 41 58 58 58 51 42 58 58 33 51 48 46 58 58 58 58 37 41 58 51 41 58 58 38 58 53 58 51 50 51 49 58 53 58 49 52 50 53 53 54 48 49 38 51 50 54 52 58 58 58 54 51 49 50 49 58 50 51 51 51 47 53 53 49 33 28 33 53 53 58 58 49 39 50 42 49 58 51 50 41 33 58 49 44 36 40 39 41 54 41 50 50 53 58 53 44 41 49 49 28 51 50 58 32 58 41 32 36 39 39 50 39 51 38 32 49 40 51 30 37 41 49 51 49 49 39 52 52 41 25 47 41 42 53 54 39 35 54 31 53 34 53 51 54 51 41 37 47 54 54 42 46 35 31 40 51 32 35 49 24 54 54 34 29 51 29 47 32 54 24 36 33 21 53 54 44 30 25 36 32 41 41 31 49 53 32 23 27 39 36 36 33 30 40 37 33 33 27 27 27 51 53 31 35 33 32 28 53 53 34 31 31 52 32 53 30 35 35 28 42 34 21 42 30 32 33 53 24 40 32 34 15 24 51 29 32 33 30 51 51 30 31 35 43 51 51 51 51 46 46 51 51 31 38 18 47 46 51 51 31 35 24 32 17 35 30 51 20 24 27 28 30 25 31 21 24 16 25 29 28 31 28 27 31 31 28 46 33 18 31 42 31 32 30 33 46 46 46 32 27 30 26 29 18 42 29 23 46 47 33 31 37 32 22 18 33 24 48 46 31 13 18 28 28 13 5 10 15 22 25 12 25 20 27 26 31 32 31 31 36 34 33 11 9 13 21 20 31 27 48 48 31 31 21 16 36 32 6 8 20 11 21 21 9 25 44 31 28 17 9 28 38 22 28 21 9 11 29 29 31 32 10 6 47 33 32 33 38 44 38 41 8 13 20 31 32 12 20 10 13 30 10 8 25 9 19 29 47 39 20 25 39 22 11 25 37 19 14 10 24 43 21 23 12 14 31 12 39 10 26 13 15 8 33 24 11 13 22 23 15 16 11 17 9 11 19 30 24 14 23 9 28 7 15 7 16 34 28 18 28 8 28 20

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_27222542_27223593
seq2: B6Ng01-280C09.g_70_1127 (reverse)

seq1  AAGAAAATGCTATTAAATAA-TATCAATTACAA-TTCAATAAATTAAATG  48
      |||||||||||||||||||| |||||||||||| ||||||||||||||||
seq2  AAGAAAATGCTATTAAATAATTATCAATTACAATTTCAATAAATTAAATG  50

seq1  GGAAAAGTAATGA-GTGCAT-AAAAAGTTTAAGATATCACTTCTACCCAC  96
      ||||||||||||| |||||| |||||||||||||||||||||||||||||
seq2  GGAAAAGTAATGAGGTGCATAAAAAAGTTTAAGATATCACTTCTACCCAC  100

seq1  AG-TCTGAACAAAACAT-ATATGCTGCATAGTATA-TATTAGAAAATTAT  143
      || |||||||||||||| ||||||||||||||||| ||||||||||||||
seq2  AGTTCTGAACAAAACATAATATGCTGCATAGTATATTATTAGAAAATTAT  150

seq1  TCTTTCTGGTATCAAAAATAGAGGTAAATACGTAGAATACTGAGTTAAAG  193
      ||||||||||||| |||||||||||||||||||||||||||||| |||||
seq2  TCTTTCTGGTATC-AAAATAGAGGTAAATACGTAGAATACTGAG-TAAAG  198

seq1  GCAGAAAAAAC-AAAAAAAAATGTTTCTGGTTAGGAATTATGTAACTGAA  242
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAAAACAAAAAAAAAATGTTTCTGGTTAGGAATTATGTAACTGAA  248

seq1  ACATAAAAGGTAAAATATTGTTAAGTTGAAATGTTAATTTTTGTAAAGAT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAAGGTAAAATATTGTTAAGTTGAAATGTTAATTTTTGTAAAGAT  298

seq1  TAAAACAACATAATAAATTAAATTAGCCTTTCAATGGCTGTTCATATCTT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAACATAATAAATTAAATTAGCCTTTCAATGGCTGTTCATATCTT  348

seq1  AATGGTTATCCTCGTGTTTAAATTACTTTAAAAATAGAATTAGTTTGTGG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTATCCTCGTGTTTAAATTACTTTAAAAATAGAATTAGTTTGTGG  398

seq1  CATACTATCATTGATTTAAGCCTCTAGTATTCCCTATCATAAGCTAATTT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTATCATTGATTTAAGCCTCTAGTATTCCCTATCATAAGCTAATTT  448

seq1  TTCTTAAACTCAGGTCAGACTTGGCCCAAGGTCACACTAATACATCTCTC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAACTCAGGTCAGACTTGGCCCAAGGTCACACTAATACATCTCTC  498

seq1  ATTGTCTACAAGTGACATTTGCTGAATATTACTTGAAGCTACATTTTTAG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTACAAGTGACATTTGCTGAATATTACTTGAAGCTACATTTTTAG  548

seq1  CATTCCCTCTGGCATGCTGAGATTAGATGTGACATTTCTTGTCCAGAATA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCCTCTGGCATGCTGAGATTAGATGTGACATTTCTTGTCCAGAATA  598

seq1  AAACACAAGGTCAATTCGAAAGAATATAATACTGTATTTTTGTGTGTGTG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAAGGTCAATTCGAAAGAATATAATACTGTATTTTTGTGTGTGTG  648

seq1  TGTGCAACTTTGCATTTGCTTATCTATGGGACACAGGCAGTTCATTTTAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAACTTTGCATTTGCTTATCTATGGGACACAGGCAGTTCATTTTAA  698

seq1  ATCACAGGTCTTATGGACCACTACCAAACACATGCTAAATCCTGCTCAAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGGTCTTATGGACCACTACCAAACACATGCTAAATCCTGCTCAAA  748

seq1  GATGCTGCCACTGTCCCAACCTATAACTCCCTCTGTGCTCCCAGAAAAAT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGCCACTGTCCCAACCTATAACTCCCTCTGTGCTCCCAGAAAAAT  798

seq1  CTTTAAGAAAAAATTACCATAGTGGAGGGTAGAATTCTCAAATTTCTACT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGAAAAAATTACCATAGTGGAGGGTAGAATTCTCAAATTTCTACT  848

seq1  GTAAGTAGGTGCTGAAAGGTTTTGACCCCTGCTAGGGAGGACGACAAGTT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTAGGTGCTGAAAGGTTTTGACCCCTGCTAGGGAGGACGACAAGTT  898

seq1  TTACAGGAGACACTTTTCTAATGGAGCAGTGTTAGAGAAGAATATAGGCT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGAGACACTTTTCTAATGGAGCAGTGTTAGAGAAGAATATAGGCT  948

seq1  ACACAAATGCATTAGACCTATTAAGCACTCTACTATGAGTTAAATCAGAC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAATGCATTAGACCTATTAAGCACTCTACTATGAGTTAAATCAGAC  998

seq1  TTCATATAAAACCAACTATGTATCAGCTATTTATTAAAATAAACTTAGGT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATAAAACCAACTATGTATCAGCTATTTATTAAAATAAACTTAGGT  1048

seq1  AAAAGAATTC  1052
      ||||||||||
seq2  AAAAGAATTC  1058

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information