BAC Information

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BAC

Clone NameB6Ng01-280C22
Chromosome6 (Build37)
Map Location 19,728,520 - 19,729,066
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
Downstream geneLOC100040838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280C22.bB6Ng01-280C22.g
ACCGA079974GA079975
length547531
definitionB6Ng01-280C22.b B6Ng01-280C22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataagaaattgtaccaaatcctctagcctttcttatcatcaagt
ttctacaaaatcataaagaattattatatttttaaggttaatattatttg
agtttttgaaatttattttatttttcatatatgctcaattcaagtttttc
ttaatctagcaggctctcccaaacataccaatacatggatccaaataatg
tattaccttaaagagaaaaaaaattgttccgtgtttatattttctacttc
tctcttgactgtgagaaatgaccgagatgaaagacttagtagagtagttt
tgtgtttcattgtttcattgttctgtttatcatggcaagtcaggcataca
acaaggattaaatgtgtataatctaatgagaccttctgttgttaactcct
agcatgatagagaattagggagtgaaaaatgtaggtcacaaaccttcaaa
gttctgtgactagtgacatctaatgacatatatatatatatatatatata
tatatatatatatacatatatatatatatatatatatatgtgtgtgt

caccttacaccagtcaaaatagctaagatcaaaatctcaggtgacaacac
aaattggtacggatgtggagaaagggaagcatgcttccattgctggttgg
attacaaactggtacaatcactctgaaaatcaatctgtgaattactcaga
aaactggaaatagatctacctgaagacccaggaatatcattcttgggaat
atacaaaaaaaaaaaaaaaaaaaaagtgccacgatgctacaagggcatga
atttcactatgttcatagtggccttgtttgtaacaactacaagctggaat
caagcaggcaggaaaaaagaggaccaaggaggattcctgtcaaggtctga
gtttattaggccaggttataagcacacagtgaggggaaatagggagaggc
tgggggggggggaattttctgggaacaaagaagtccgcatcgggggacat
gaaggctgaattcaaactgcaggcaaaatgcgccctgagtcttattcagg
aatgtacattcctcccttaacatcccagggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19728520_19729066
seq2: B6Ng01-280C22.b_44_590 (reverse)

seq1  ACACACACATATATATATATATATATATATATGTATATATATATATATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACATATATATATATATATATATATATGTATATATATATATATAT  50

seq1  ATATATATATATATATATATGTCATTAGATGTCACTAGTCACAGAACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATGTCATTAGATGTCACTAGTCACAGAACTTT  100

seq1  GAAGGTTTGTGACCTACATTTTTCACTCCCTAATTCTCTATCATGCTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTTGTGACCTACATTTTTCACTCCCTAATTCTCTATCATGCTAGG  150

seq1  AGTTAACAACAGAAGGTCTCATTAGATTATACACATTTAATCCTTGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACAACAGAAGGTCTCATTAGATTATACACATTTAATCCTTGTTGT  200

seq1  ATGCCTGACTTGCCATGATAAACAGAACAATGAAACAATGAAACACAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTGACTTGCCATGATAAACAGAACAATGAAACAATGAAACACAAAA  250

seq1  CTACTCTACTAAGTCTTTCATCTCGGTCATTTCTCACAGTCAAGAGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCTACTAAGTCTTTCATCTCGGTCATTTCTCACAGTCAAGAGAGAA  300

seq1  GTAGAAAATATAAACACGGAACAATTTTTTTTCTCTTTAAGGTAATACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAATATAAACACGGAACAATTTTTTTTCTCTTTAAGGTAATACAT  350

seq1  TATTTGGATCCATGTATTGGTATGTTTGGGAGAGCCTGCTAGATTAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGATCCATGTATTGGTATGTTTGGGAGAGCCTGCTAGATTAAGAA  400

seq1  AAACTTGAATTGAGCATATATGAAAAATAAAATAAATTTCAAAAACTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGAATTGAGCATATATGAAAAATAAAATAAATTTCAAAAACTCAA  450

seq1  ATAATATTAACCTTAAAAATATAATAATTCTTTATGATTTTGTAGAAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTAACCTTAAAAATATAATAATTCTTTATGATTTTGTAGAAACT  500

seq1  TGATGATAAGAAAGGCTAGAGGATTTGGTACAATTTCTTATGAATTC  547
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGATAAGAAAGGCTAGAGGATTTGGTACAATTTCTTATGAATTC  547


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