BAC Information

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BAC

Clone NameB6Ng01-280I02
Chromosome6 (Build37)
Map Location 130,513,496 - 130,514,385
singlet/doubletsinglet
Overlap geneLOC667793
Upstream geneKlre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779
Downstream geneEG667798, EG625558, LOC625566, EG636947, LOC625628, EG625648, LOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280I02.bB6Ng01-280I02.g
ACCGA080214GA080215
length9011,209
definitionB6Ng01-280I02.b B6Ng01-280I02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgaaaaatattcatgaattctagtgatgattgaaaggagaatat
gtgtgtgtggggtgtatatgtgtatttgtttaggtacatttacatttagg
gatataaaggcatggatataatgtaagagatcaagtttagtcatgcattc
tcagataatgcagtacaacattttttgtgtaacaaagattccaagtagag
taagctgactgatcacaattagtaaggatcatacatgttttgtgttctga
ttactaggagtacatgaatgtaccatgtccagagttttacctgggttcca
agataccaactaaacccagttcttcaagctcaatatccaggcacttttct
cacagtgatatctattctacagtactaggcttcaagtttcattttagagt
tgttcaatttatgtttttgaattttattttattttattttattttaattt
attttttacactccgtattttatcctccacacatcccatccagcttccaa
ctgctccacatcacacacctcttccccaccacaccccatctccacgagga
tgactccacccacacccaacatgaactctaaactccctgaggcctcaagt
ttcttgagtgtttggtgcatcatctctgaatgagcaaagaccgagtgagg
cttatactgtatgtttgctcagagcctcttataaagtgttgtatgctgtc
tcttaggtggtccaatatttgagagatctcaggatccagattaattaaga
ctgttgggcccctcctacaggatcacccttcttctgagctttctttcagc
cttccctatttgacaggaaggggtgagcttgctttctttctcattgggtt
ggggtgccaaatatctaaatgtggactatttcttttttttttttggttta
t
gaattcttctgggtagacaggcctgggctggcatttgtgtcctcttaggg
tctgtataacatctgtccaggatcttcaagtttttatagtctcttgtagg
aagtcttatgtaattctgataggtctgcatttatatgttacttgaccttt
tctccttactacttttaatattttatccttatttactgcatttgttgttc
tgattagtatgtgtcaggagaaaattcttttctgttccagtctatttgga
gttccataggcagcttttatgttcatgggcaaatctttctttagattatg
gaagttttttttttctataattttgttgaaaatttttgctggctctttta
agttgaagatcttcattctcatctttacctattattcatacgtttggtct
tctcattgtgtcctagatttcctggatgttttgagttaggatctttttgc
agtttgcattttcttgattgttatgtgcatgttttctatggaatcttctg
gacctgagagtctctcttccctctcttgtgttctgaagcttatgcttgca
tctatggttcctgatttcttccctaggatttctatctccagagttgtctc
cctttgtgatttctttattgtttctatttgcatttttagatcctggatgg
gtctgttcaattccttcacctgtttggtagtgttttcctctaacgaaatt
aatttctttcctcttaaacagcttctagctctttacctgtgtttcttgta
tttccttcttaaagtcctccatcatcatcatgagaagtgactttagatcc
atttcttgcttttatggtgtgatggtgtatccaggactggctatgtggga
gaatctgtttactgattatgccaagtaaccttgggtttctgttgcttctg
ttcttatgcttgcctccttccatctgatttatcttcaagtgcttgctgcc
ctgcaattttattctgattggaatcctgtctttccttatattcccaggtt
aatttcaggactactcagagtcagggtttctctgtgatcagtgattttgg
tctctgtgaagtgagaatcttgttgtggtgtcaaggtttttgccagtaag
gcttccactggaacctgagaatcctatgttaaccagccttccttgtttgc
tgggaatcctgaatcttagactgtacttgggtcagttcaggtgtgctctt
taatatcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_130513496_130514385
seq2: B6Ng01-280I02.b_44_944

seq1  GAATTCTGAAAAATATTCATGAATTCTAGTGATGATTGAAAGGAGAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAAAATATTCATGAATTCTAGTGATGATTGAAAGGAGAATAT  50

seq1  GTGTGTGTGGGGTGTATATGTGTATTTGTTTAGGTACATTTACATTTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGGGGTGTATATGTGTATTTGTTTAGGTACATTTACATTTAGG  100

seq1  GATATAAAGGCATGGATATAATGTAAGAGATCAAGTTTAGTCATGCATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAAAGGCATGGATATAATGTAAGAGATCAAGTTTAGTCATGCATTC  150

seq1  TCAGATAATGCAGTACAACATTTTTTGTGTAACAAAGATTCCAAGTAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATAATGCAGTACAACATTTTTTGTGTAACAAAGATTCCAAGTAGAG  200

seq1  TAAGCTGACTGATCACAATTAGTAAGGATCATACATGTTTTGTGTTCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGACTGATCACAATTAGTAAGGATCATACATGTTTTGTGTTCTGA  250

seq1  TTACTAGGAGTACATGAATGTACCATGTCCAGAGTTTTACCTGGGTTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGGAGTACATGAATGTACCATGTCCAGAGTTTTACCTGGGTTCCA  300

seq1  AGATACCAACTAAACCCAGTTCTTCAAGCTCAATATCCAGGCACTTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCAACTAAACCCAGTTCTTCAAGCTCAATATCCAGGCACTTTTCT  350

seq1  CACAGTGATATCTATTCTACAGTACTAGGCTTCAAGTTTCATTTTAGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGATATCTATTCTACAGTACTAGGCTTCAAGTTTCATTTTAGAGT  400

seq1  TGTTCAATTTATGTTTTTGAATTTTATTTTATTTTATTTTATTTTAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAATTTATGTTTTTGAATTTTATTTTATTTTATTTTATTTTAATTT  450

seq1  ATTTTTTACACTCCGTATTTTATCCTCCACACATCCCATCCAGCTTCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTACACTCCGTATTTTATCCTCCACACATCCCATCCAGCTTCCAA  500

seq1  CTGCTCCACATCACACACCTCTTCCCCACCACACCCCATCTCCACGAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCACATCACACACCTCTTCCCCACCACACCCCATCTCCACGAGGA  550

seq1  TGACTCCACCCACACCCAACATGAACTCTAAACTCCCTGAGGCCTCAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCACCCACACCCAACATGAACTCTAAACTCCCTGAGGCCTCAAGT  600

seq1  TTCTTGAGTGTTTGGTGCATCATCTCTGAATGAGCAAAGACCGAGTGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAGTGTTTGGTGCATCATCTCTGAATGAGCAAAGACCGAGTGAGG  650

seq1  CTTATACTGTATGTTTGCTCAGAGCCTCTTATAAAGTGTTGTATGCTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATACTGTATGTTTGCTCAGAGCCTCTTATAAAGTGTTGTATGCTGTC  700

seq1  TCTTAGGTGGTCCAATATTTGAGAGATCTCAGGATCCAGATTAATTAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGGTGGTCCAATATTTGAGAGATCTCAGGATCCAGATTAATTAAGA  750

seq1  CTGTTGG--CCCTCCTACAGGATCACCCTTCTTCTGAGC-TTCTTTCAGC  797
      |||||||  |||||||||||||||||||||||||||||| ||||||||||
seq2  CTGTTGGGCCCCTCCTACAGGATCACCCTTCTTCTGAGCTTTCTTTCAGC  800

seq1  CTTCCCTAATTGACAAGAA-GGGTGAGC-TGC-TTCTTTC-CATTGG--T  841
      |||||||| |||||| ||| |||||||| ||| ||||||| ||||||  |
seq2  CTTCCCTATTTGACAGGAAGGGGTGAGCTTGCTTTCTTTCTCATTGGGTT  850

seq1  TGGGTG-CAAATATCTAAATGT-GACTATTTCTTTTTTTTTTTTTGTTTA  889
       ||||| ||||||||||||||| ||||||||||||||||||||| |||||
seq2  GGGGTGCCAAATATCTAAATGTGGACTATTTCTTTTTTTTTTTTGGTTTA  900

seq1  T  890
      |
seq2  T  901