BAC Information

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BAC

Clone NameB6Ng01-282M08
Chromosome6 (Build37)
Map Location 72,069,140 - 72,069,497
singlet/doubletsinglet
Overlap geneSt3gal5
Upstream geneLOC619547, Thnsl2, Fabp1, Smyd1, Krcc1, Gm1070, Cd8b1, LOC100042853, Cd8a, Rmnd5a, LOC100042863, Rnf103, Vps24, Jmjd1a, Ppia-ps6_731.1, LOC668029, LOC668034, Reep1, Mrpl35, Immt, Ptcd3, Rpo1-4, LOC668057
Downstream geneAtoh8, Sftpb, Usp39, 0610030E20Rik, Tmem150, 2500002L14Rik, Vamp5, Vamp8, Ggcx, Mat2a, Sh2d6, Capg, Rbed1, Retsat, Tgoln1, LOC100038890, Tcf3, Kcmf1, Tmsb10, Dnahc6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282M08.b
ACCGA081901
length358
definitionB6Ng01-282M08.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
actacgtagctcaggcccacattgaactggcaatcttcctgcctgagcct
ccctaatgctggggctggagggtgtaccaccacacctggctcgactttgg
tcattttccttgtggataatggattctttgattcgaaaagggtaaaaccc
ttttttatcttaagctgacattcttgctcatcctagcactcaagaatctg
aggcaggtggactgtcagatcaagggcagcctctcctacacaataaggct
ctgtttcaaacataagtaaactgacacgcaagttatttcattcttttttt
cttttccctgctttaaacaacctgtcccttaactccaggtggtggtggtg
gtggtggt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_72069140_72069497
seq2: B6Ng01-282M08.b_52_409 (reverse)

seq1  ACCACCACCACCACCACCACCTGGAGTTAAGGGACAGGTTGTTTAAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCACCACCACCACCACCTGGAGTTAAGGGACAGGTTGTTTAAAGCA  50

seq1  GGGAAAAGAAAAAAAGAATGAAATAACTTGCGTGTCAGTTTACTTATGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAGAAAAAAAGAATGAAATAACTTGCGTGTCAGTTTACTTATGTT  100

seq1  TGAAACAGAGCCTTATTGTGTAGGAGAGGCTGCCCTTGATCTGACAGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAGAGCCTTATTGTGTAGGAGAGGCTGCCCTTGATCTGACAGTCC  150

seq1  ACCTGCCTCAGATTCTTGAGTGCTAGGATGAGCAAGAATGTCAGCTTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCTCAGATTCTTGAGTGCTAGGATGAGCAAGAATGTCAGCTTAAG  200

seq1  ATAAAAAAGGGTTTTACCCTTTTCGAATCAAAGAATCCATTATCCACAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAGGGTTTTACCCTTTTCGAATCAAAGAATCCATTATCCACAAG  250

seq1  GAAAATGACCAAAGTCGAGCCAGGTGTGGTGGTACACCCTCCAGCCCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGACCAAAGTCGAGCCAGGTGTGGTGGTACACCCTCCAGCCCCAG  300

seq1  CATTAGGGAGGCTCAGGCAGGAAGATTGCCAGTTCAATGTGGGCCTGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGGGAGGCTCAGGCAGGAAGATTGCCAGTTCAATGTGGGCCTGAGC  350

seq1  TACGTAGT  358
      ||||||||
seq2  TACGTAGT  358